RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 TTC21BQ7Z4L5 1316 aa12.15□□□□□ -0.46
BRD9-209ENST00000490814 ATP10DQ9P241 1426 aa12.15□□□□□ -0.46
BRD9-209ENST00000490814 UBTFL1P0CB47 393 aaPredicted RBP12.14□□□□□ -0.47
BRD9-209ENST00000490814 UNC5CLQ8IV45 518 aa12.14□□□□□ -0.47
BRD9-209ENST00000490814 GADD45BO75293 160 aaPredicted RBP12.14□□□□□ -0.47
BRD9-209ENST00000490814 GNAI3P08754 354 aa12.14□□□□□ -0.47
BRD9-209ENST00000490814 CHAF1AQ13111 956 aaPredicted RBP12.14□□□□□ -0.47
BRD9-209ENST00000490814 STRN4Q9NRL3 753 aa12.14□□□□□ -0.47
BRD9-209ENST00000490814 FIBPO43427 364 aa12.14□□□□□ -0.47
BRD9-209ENST00000490814 PHF14O94880 888 aa12.14□□□□□ -0.47
BRD9-209ENST00000490814 ADCY5O95622 1261 aa12.14□□□□□ -0.47
BRD9-209ENST00000490814 HSPA1LP34931 641 aa12.14□□□□□ -0.47
BRD9-209ENST00000490814 PRIMPOLQ96LW4 560 aa12.14□□□□□ -0.47
BRD9-209ENST00000490814 MAP3K19Q56UN5 1328 aa12.13□□□□□ -0.47
BRD9-209ENST00000490814 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
BRD9-209ENST00000490814 CAPN2P17655 700 aa12.13□□□□□ -0.47
BRD9-209ENST00000490814 SLIT1O75093 1534 aa12.13□□□□□ -0.47
BRD9-209ENST00000490814 U2AF2P26368 475 aaKnown RBP eCLIP12.13□□□□□ -0.47
BRD9-209ENST00000490814 CHMLP26374 656 aa12.13□□□□□ -0.47
BRD9-209ENST00000490814 TNNT3P45378 269 aaPredicted RBP12.13□□□□□ -0.47
BRD9-209ENST00000490814 GABPB1Q06547 395 aaPredicted RBP12.13□□□□□ -0.47
BRD9-209ENST00000490814 SPC24Q8NBT2 197 aa12.13□□□□□ -0.47
BRD9-209ENST00000490814 MAP2P11137 1827 aaKnown RBP12.13□□□□□ -0.47
BRD9-209ENST00000490814 ATP7BP35670 1465 aa12.13□□□□□ -0.47
BRD9-209ENST00000490814 HCLS1P14317 486 aaPredicted RBP12.13□□□□□ -0.47
BRD9-209ENST00000490814 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
BRD9-209ENST00000490814 MCM2P49736 904 aa12.12□□□□□ -0.47
BRD9-209ENST00000490814 CDK12Q9NYV4 1490 aaPredicted RBP12.12□□□□□ -0.47
BRD9-209ENST00000490814 CWC27Q6UX04 472 aaKnown RBP12.12□□□□□ -0.47
BRD9-209ENST00000490814 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
BRD9-209ENST00000490814 CPA1P15085 419 aa12.12□□□□□ -0.47
BRD9-209ENST00000490814 USP48Q86UV5 1035 aa12.12□□□□□ -0.47
BRD9-209ENST00000490814 CALCOCO1Q9P1Z2 691 aa12.12□□□□□ -0.47
BRD9-209ENST00000490814 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
BRD9-209ENST00000490814 PIBF1Q8WXW3 757 aa12.11□□□□□ -0.47
BRD9-209ENST00000490814 CPS1P31327 1500 aa12.11□□□□□ -0.47
BRD9-209ENST00000490814 LOC102724159A0A0B4J2E5 919 aa12.11□□□□□ -0.47
BRD9-209ENST00000490814 TULP2O00295 520 aa12.11□□□□□ -0.47
BRD9-209ENST00000490814 PWP2Q15269 919 aaKnown RBP12.11□□□□□ -0.47
BRD9-209ENST00000490814 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
BRD9-209ENST00000490814 C8orf37Q96NL8 207 aa12.11□□□□□ -0.47
BRD9-209ENST00000490814 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
BRD9-209ENST00000490814 AATKQ6ZMQ8 1374 aa12.11□□□□□ -0.47
BRD9-209ENST00000490814 SRGAP3O43295 1099 aa12.1□□□□□ -0.47
BRD9-209ENST00000490814 BRD1O95696 1058 aa12.1□□□□□ -0.47
BRD9-209ENST00000490814 ANXA1P04083 346 aa12.1□□□□□ -0.47
BRD9-209ENST00000490814 GTF2F1P35269 517 aaKnown RBP eCLIP12.1□□□□□ -0.475e-8■■□□□ 13.4
BRD9-209ENST00000490814 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
BRD9-209ENST00000490814 CNPY2Q9Y2B0 182 aa12.1□□□□□ -0.47
BRD9-209ENST00000490814 VPS37CA5D8V6 355 aaPredicted RBP12.1□□□□□ -0.47
BRD9-209ENST00000490814 TMED8Q6PL24 325 aaPredicted RBP12.1□□□□□ -0.47
BRD9-209ENST00000490814 EYA1Q99502 592 aa12.1□□□□□ -0.47
BRD9-209ENST00000490814 FEZ1Q99689 392 aa12.1□□□□□ -0.47
BRD9-209ENST00000490814 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
BRD9-209ENST00000490814 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 PHAXQ9H814 394 aaKnown RBP12.09□□□□□ -0.47
BRD9-209ENST00000490814 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 ATP8B2P98198 1209 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 NGLY1Q96IV0 654 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 OGFRQ9NZT2 677 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 SRCAPQ6ZRS2 3230 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 CPSF1Q10570 1443 aaKnown RBP12.09□□□□□ -0.47
BRD9-209ENST00000490814 EVA1CP58658 441 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 IL25Q9H293 177 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 PRDM11Q9NQV5 511 aa12.09□□□□□ -0.47
BRD9-209ENST00000490814 RGS12O14924 1447 aa12.08□□□□□ -0.47
BRD9-209ENST00000490814 DIAPH3Q9NSV4 1193 aa12.08□□□□□ -0.48
BRD9-209ENST00000490814 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
BRD9-209ENST00000490814 KIAA0232Q92628 1395 aa12.08□□□□□ -0.48
BRD9-209ENST00000490814 GNAT3A8MTJ3 354 aa12.07□□□□□ -0.48
BRD9-209ENST00000490814 DRC7Q8IY82 874 aa12.07□□□□□ -0.48
BRD9-209ENST00000490814 TRERF1Q96PN7 1200 aa12.07□□□□□ -0.48
BRD9-209ENST00000490814 SRCIN1Q9C0H9 1055 aa12.07□□□□□ -0.48
BRD9-209ENST00000490814 KIF20BQ96Q89 1820 aa12.07□□□□□ -0.48
BRD9-209ENST00000490814 CASTP20810 708 aaKnown RBP12.07□□□□□ -0.48
BRD9-209ENST00000490814 CCDC83Q8IWF9 413 aa12.07□□□□□ -0.48
BRD9-209ENST00000490814 FAM184AQ8NB25 1140 aa12.07□□□□□ -0.48
BRD9-209ENST00000490814 RIOK3O14730 519 aaKnown RBP12.07□□□□□ -0.48
BRD9-209ENST00000490814 SLFN14P0C7P3 912 aa12.07□□□□□ -0.48
BRD9-209ENST00000490814 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
BRD9-209ENST00000490814 GIMAP6Q6P9H5 292 aa12.06□□□□□ -0.48
BRD9-209ENST00000490814 FERMT3Q86UX7 667 aa12.06□□□□□ -0.48
BRD9-209ENST00000490814 BANK1Q8NDB2 785 aa12.06□□□□□ -0.48
BRD9-209ENST00000490814 USP44Q9H0E7 712 aa12.06□□□□□ -0.48
BRD9-209ENST00000490814 KNDC1Q76NI1 1749 aa12.06□□□□□ -0.48
BRD9-209ENST00000490814 ERICH4A6NGS2 130 aa12.06□□□□□ -0.48
BRD9-209ENST00000490814 EP400NLQ6ZTU2 488 aa12.06□□□□□ -0.48
BRD9-209ENST00000490814 AK2P54819 239 aa12.05□□□□□ -0.48
BRD9-209ENST00000490814 TAF7Q15545 349 aaPredicted RBP12.05□□□□□ -0.48
BRD9-209ENST00000490814 UVSSAQ2YD98 709 aa12.05□□□□□ -0.48
BRD9-209ENST00000490814 GRIPAP1Q4V328 841 aa12.05□□□□□ -0.48
BRD9-209ENST00000490814 CCDC183Q5T5S1 534 aa12.05□□□□□ -0.48
BRD9-209ENST00000490814 CNTROBQ8N137 903 aa12.05□□□□□ -0.48
BRD9-209ENST00000490814 RHPN1Q8TCX5 695 aa12.05□□□□□ -0.48
BRD9-209ENST00000490814 LRRC59Q96AG4 307 aaKnown RBP12.05□□□□□ -0.48
BRD9-209ENST00000490814 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
BRD9-209ENST00000490814 ANKRD26Q9UPS8 1709 aa12.05□□□□□ -0.48
BRD9-209ENST00000490814 ANAPC15P60006 121 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms