RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 NCAPD2Q15021 1401 aa10.01□□□□□ -0.81
PRPF4B-208ENST00000490653 GIGYF1O75420 1035 aaPredicted RBP10.01□□□□□ -0.81
PRPF4B-208ENST00000490653 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
PRPF4B-208ENST00000490653 CC2D1BQ5T0F9 858 aaKnown RBP10.01□□□□□ -0.81
PRPF4B-208ENST00000490653 MSL1Q68DK7 614 aa10.01□□□□□ -0.81
PRPF4B-208ENST00000490653 CCNL1Q9UK58 526 aaPredicted RBP10.01□□□□□ -0.81
PRPF4B-208ENST00000490653 LY75O60449 1722 aa10.01□□□□□ -0.81
PRPF4B-208ENST00000490653 PCDH11XQ9BZA7 1347 aa10.01□□□□□ -0.81
PRPF4B-208ENST00000490653 PCDH11YQ9BZA8 1340 aa10.01□□□□□ -0.81
PRPF4B-208ENST00000490653 ATP10DQ9P241 1426 aa10□□□□□ -0.81
PRPF4B-208ENST00000490653 PHKG2P15735 406 aa10□□□□□ -0.81
PRPF4B-208ENST00000490653 IL13P35225 146 aa10□□□□□ -0.81
PRPF4B-208ENST00000490653 EMILIN3Q9NT22 766 aa10□□□□□ -0.81
PRPF4B-208ENST00000490653 TFCP2L1Q9NZI6 479 aa10□□□□□ -0.81
PRPF4B-208ENST00000490653 SPG7Q9UQ90 795 aa10□□□□□ -0.81
PRPF4B-208ENST00000490653 ANKRD26Q9UPS8 1709 aa9.99□□□□□ -0.81
PRPF4B-208ENST00000490653 TOGARAM1Q9Y4F4 1720 aa9.99□□□□□ -0.81
PRPF4B-208ENST00000490653 ITGB4P16144 1822 aa9.99□□□□□ -0.81
PRPF4B-208ENST00000490653 PPP1R3GB7ZBB8 358 aa9.99□□□□□ -0.81
PRPF4B-208ENST00000490653 ASAP1Q9ULH1 1129 aa9.99□□□□□ -0.81
PRPF4B-208ENST00000490653 IGSF1Q8N6C5 1336 aa9.99□□□□□ -0.81
PRPF4B-208ENST00000490653 MTHFSP49914 203 aa9.98□□□□□ -0.81
PRPF4B-208ENST00000490653 SULT6B1Q6IMI4 303 aa9.98□□□□□ -0.81
PRPF4B-208ENST00000490653 IFNL2Q8IZJ0 200 aa9.98□□□□□ -0.81
PRPF4B-208ENST00000490653 PCDHGA10Q9Y5H3 936 aa9.98□□□□□ -0.81
PRPF4B-208ENST00000490653 PKD1L3Q7Z443 1732 aa9.97□□□□□ -0.81
PRPF4B-208ENST00000490653 POLD1P28340 1107 aa9.97□□□□□ -0.81
PRPF4B-208ENST00000490653 SLC4A9Q96Q91 983 aa9.97□□□□□ -0.81
PRPF4B-208ENST00000490653 ATG3Q9NT62 314 aa9.97□□□□□ -0.81
PRPF4B-208ENST00000490653 PALLDQ8WX93 1383 aa9.97□□□□□ -0.81
PRPF4B-208ENST00000490653 HMOX1P09601 288 aa9.96□□□□□ -0.82
PRPF4B-208ENST00000490653 ITPK1Q13572 414 aa9.96□□□□□ -0.82
PRPF4B-208ENST00000490653 PLEKHO1Q53GL0 409 aaPredicted RBP9.96□□□□□ -0.82
PRPF4B-208ENST00000490653 LINC00116Q8NCU8 138 aa9.96□□□□□ -0.82
PRPF4B-208ENST00000490653 RABGEF1Q9UJ41 708 aa9.96□□□□□ -0.82
PRPF4B-208ENST00000490653 WWC3Q9ULE0 1092 aa9.96□□□□□ -0.82
PRPF4B-208ENST00000490653 ZNF530Q6P9A1 599 aaPredicted RBP9.95□□□□□ -0.82
PRPF4B-208ENST00000490653 TMOD3Q9NYL9 352 aa9.95□□□□□ -0.82
PRPF4B-208ENST00000490653 LOC102724428A0A0B4J2F2 783 aa9.94□□□□□ -0.82
PRPF4B-208ENST00000490653 PHF14O94880 888 aa9.94□□□□□ -0.82
PRPF4B-208ENST00000490653 COL9A1P20849 921 aa9.94□□□□□ -0.82
PRPF4B-208ENST00000490653 SIK1P57059 783 aa9.94□□□□□ -0.82
PRPF4B-208ENST00000490653 PROX2Q3B8N5 592 aa9.94□□□□□ -0.82
PRPF4B-208ENST00000490653 SMARCC1Q92922 1105 aaPredicted RBP9.94□□□□□ -0.82
PRPF4B-208ENST00000490653 LGR6Q9HBX8 967 aa9.94□□□□□ -0.82
PRPF4B-208ENST00000490653 GRIN3BO60391 1043 aa9.93□□□□□ -0.82
PRPF4B-208ENST00000490653 ATP6V1AP38606 617 aa9.93□□□□□ -0.82
PRPF4B-208ENST00000490653 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
PRPF4B-208ENST00000490653 NFATC2IPQ8NCF5 419 aa9.93□□□□□ -0.82
PRPF4B-208ENST00000490653 ZNF526Q8TF50 670 aaPredicted RBP9.93□□□□□ -0.82
PRPF4B-208ENST00000490653 FBXW7Q969H0 707 aa9.93□□□□□ -0.82
PRPF4B-208ENST00000490653 CD2APQ9Y5K6 639 aa9.93□□□□□ -0.82
PRPF4B-208ENST00000490653 TAF1LQ8IZX4 1826 aa9.93□□□□□ -0.82
PRPF4B-208ENST00000490653 KDM6AO15550 1401 aaPredicted RBP9.92□□□□□ -0.82
PRPF4B-208ENST00000490653 HSPA6P17066 643 aa9.92□□□□□ -0.82
PRPF4B-208ENST00000490653 CABP4P57796 275 aa9.92□□□□□ -0.82
PRPF4B-208ENST00000490653 ANKK1Q8NFD2 765 aa9.92□□□□□ -0.82
PRPF4B-208ENST00000490653 C5P01031 1676 aa9.92□□□□□ -0.82
PRPF4B-208ENST00000490653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
PRPF4B-208ENST00000490653 ERVV-2B6SEH9 535 aa9.91□□□□□ -0.82
PRPF4B-208ENST00000490653 DIAPH1O60610 1272 aaKnown RBP9.91□□□□□ -0.82
PRPF4B-208ENST00000490653 MTHFSDQ2M296 383 aaKnown RBP9.91□□□□□ -0.82
PRPF4B-208ENST00000490653 AMOTQ4VCS5 1084 aa9.91□□□□□ -0.82
PRPF4B-208ENST00000490653 DNAJC5GQ8N7S2 189 aa9.91□□□□□ -0.82
PRPF4B-208ENST00000490653 DCAF5Q96JK2 942 aa9.91□□□□□ -0.82
PRPF4B-208ENST00000490653 AK7Q96M32 723 aa9.91□□□□□ -0.82
PRPF4B-208ENST00000490653 C4BP0C0L5 1744 aa9.9□□□□□ -0.82
PRPF4B-208ENST00000490653 KIAA1551Q9HCM1 1747 aa9.9□□□□□ -0.82
PRPF4B-208ENST00000490653 PTCD1O75127 700 aaKnown RBP9.9□□□□□ -0.82
PRPF4B-208ENST00000490653 ITGBL1O95965 494 aaPredicted RBP9.9□□□□□ -0.82
PRPF4B-208ENST00000490653 LAPTM4BQ86VI4 370 aa9.9□□□□□ -0.82
PRPF4B-208ENST00000490653 IRX2Q9BZI1 471 aaPredicted RBP9.9□□□□□ -0.82
PRPF4B-208ENST00000490653 KDRP35968 1356 aa9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 CICQ96RK0 1608 aaPredicted RBP9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 U2SURPO15042 1029 aaKnown RBP9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 GNPATO15228 680 aa9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 RNMTO43148 476 aaKnown RBP9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 HSP90AB1P08238 724 aaKnown RBP9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 C1orf141Q5JVX7 400 aa9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 PXDNLA1KZ92 1463 aa9.89□□□□□ -0.83
PRPF4B-208ENST00000490653 CAMK2BQ13554 666 aa9.88□□□□□ -0.83
PRPF4B-208ENST00000490653 AKAP4Q5JQC9 854 aa9.88□□□□□ -0.83
PRPF4B-208ENST00000490653 UBR3Q6ZT12 1888 aa9.87□□□□□ -0.83
PRPF4B-208ENST00000490653 SOWAHBA6NEL2 793 aa9.87□□□□□ -0.83
PRPF4B-208ENST00000490653 PPP2R1AP30153 589 aa9.87□□□□□ -0.83
PRPF4B-208ENST00000490653 BCAMP50895 628 aa9.87□□□□□ -0.83
PRPF4B-208ENST00000490653 FLAD1Q8NFF5 587 aa9.87□□□□□ -0.83
PRPF4B-208ENST00000490653 IL17REQ8NFR9 667 aa9.87□□□□□ -0.83
PRPF4B-208ENST00000490653 ARHGEF1Q92888 912 aaKnown RBP9.87□□□□□ -0.83
PRPF4B-208ENST00000490653 PHACTR3Q96KR7 559 aa9.87□□□□□ -0.83
PRPF4B-208ENST00000490653 NPC1L1Q9UHC9 1359 aa9.87□□□□□ -0.83
PRPF4B-208ENST00000490653 MYH14Q7Z406 1995 aaKnown RBP9.86□□□□□ -0.83
PRPF4B-208ENST00000490653 COL3A1P02461 1466 aaPredicted RBP9.86□□□□□ -0.83
PRPF4B-208ENST00000490653 KCNA3P22001 575 aa9.86□□□□□ -0.83
PRPF4B-208ENST00000490653 HTRA3P83110 453 aa9.86□□□□□ -0.83
PRPF4B-208ENST00000490653 DNAJC10Q8IXB1 793 aa9.86□□□□□ -0.83
PRPF4B-208ENST00000490653 EPAS1Q99814 870 aa9.86□□□□□ -0.83
PRPF4B-208ENST00000490653 SLC52A2Q9HAB3 445 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms