RNA–Protein interactions for RNA: ENST00000490435.5

ITGA4-211, Transcript of integrin subunit alpha 4, humanhuman

TSL 5

Gene ITGA4, Length 720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-211ENST00000490435 SIN3BO75182 1162 aa10.13□□□□□ -0.79
ITGA4-211ENST00000490435 EPHA4P54764 986 aa10.13□□□□□ -0.79
ITGA4-211ENST00000490435 SLC9A9Q8IVB4 645 aa10.13□□□□□ -0.79
ITGA4-211ENST00000490435 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
ITGA4-211ENST00000490435 GATA4P43694 442 aa10.12□□□□□ -0.79
ITGA4-211ENST00000490435 DOC2BQ14184 412 aa10.12□□□□□ -0.79
ITGA4-211ENST00000490435 TRIM50Q86XT4 487 aa10.12□□□□□ -0.79
ITGA4-211ENST00000490435 TNS4Q8IZW8 715 aa10.12□□□□□ -0.79
ITGA4-211ENST00000490435 KRTAP9-2Q9BYQ4 174 aa10.12□□□□□ -0.79
ITGA4-211ENST00000490435 SERTM1A2A2V5 107 aa10.11□□□□□ -0.79
ITGA4-211ENST00000490435 PRRT3Q5FWE3 981 aa10.11□□□□□ -0.79
ITGA4-211ENST00000490435 DEPDC4Q8N2C3 294 aa10.11□□□□□ -0.79
ITGA4-211ENST00000490435 SEMA6BQ9H3T3 888 aa10.11□□□□□ -0.79
ITGA4-211ENST00000490435 ADARB2-AS1A8MUL3 147 aa10.1□□□□□ -0.79
ITGA4-211ENST00000490435 TBCELQ5QJ74 424 aa10.1□□□□□ -0.79
ITGA4-211ENST00000490435 C7orf43Q8WVR3 580 aa10.1□□□□□ -0.79
ITGA4-211ENST00000490435 MDFIQ99750 246 aa10.1□□□□□ -0.79
ITGA4-211ENST00000490435 NEUROD1Q13562 356 aa10.09□□□□□ -0.79
ITGA4-211ENST00000490435 RHPN1Q8TCX5 695 aa10.09□□□□□ -0.79
ITGA4-211ENST00000490435 SFSWAPQ12872 951 aaKnown RBP10.08□□□□□ -0.8
ITGA4-211ENST00000490435 TPCN2Q8NHX9 752 aa10.08□□□□□ -0.8
ITGA4-211ENST00000490435 TNFRSF25Q93038 417 aa10.08□□□□□ -0.8
ITGA4-211ENST00000490435 CHMP3Q9Y3E7 222 aa10.08□□□□□ -0.8
ITGA4-211ENST00000490435 KRTAP9-6A0A140TA67 174 aa10.07□□□□□ -0.8
ITGA4-211ENST00000490435 ATP1A2P50993 1020 aa10.07□□□□□ -0.8
ITGA4-211ENST00000490435 SPEM2Q0P670 501 aa10.07□□□□□ -0.8
ITGA4-211ENST00000490435 C1orf53Q5VUE5 145 aa10.07□□□□□ -0.8
ITGA4-211ENST00000490435 SLC30A3Q99726 388 aa10.07□□□□□ -0.8
ITGA4-211ENST00000490435 ANKIB1Q9P2G1 1089 aa10.07□□□□□ -0.8
ITGA4-211ENST00000490435 M0R082 166 aa10.06□□□□□ -0.8
ITGA4-211ENST00000490435 RAD21O60216 631 aa10.06□□□□□ -0.8
ITGA4-211ENST00000490435 APBA3O96018 575 aa10.06□□□□□ -0.8
ITGA4-211ENST00000490435 PSMA6P60900 246 aaKnown RBP10.06□□□□□ -0.8
ITGA4-211ENST00000490435 ZNF417Q8TAU3 575 aa10.06□□□□□ -0.8
ITGA4-211ENST00000490435 ZNF587Q96SQ5 575 aaPredicted RBP10.06□□□□□ -0.8
ITGA4-211ENST00000490435 PRDM6Q9NQX0 595 aa10.06□□□□□ -0.8
ITGA4-211ENST00000490435 ITGB7P26010 798 aa10.05□□□□□ -0.8
ITGA4-211ENST00000490435 SH3PXD2AQ5TCZ1 1133 aa10.05□□□□□ -0.8
ITGA4-211ENST00000490435 CCDC102BQ68D86 513 aa10.05□□□□□ -0.8
ITGA4-211ENST00000490435 PLEKHM2Q8IWE5 1019 aa10.05□□□□□ -0.8
ITGA4-211ENST00000490435 ZBTB7BO15156 539 aaPredicted RBP10.04□□□□□ -0.8
ITGA4-211ENST00000490435 HIRAP54198 1017 aaPredicted RBP10.04□□□□□ -0.8
ITGA4-211ENST00000490435 KRTAP1-3Q8IUG1 177 aa10.04□□□□□ -0.8
ITGA4-211ENST00000490435 POM121Q96HA1 1249 aa10.04□□□□□ -0.8
ITGA4-211ENST00000490435 CEP63Q96MT8 703 aa10.04□□□□□ -0.8
ITGA4-211ENST00000490435 TSPAN10Q9H1Z9 355 aaPredicted RBP10.04□□□□□ -0.8
ITGA4-211ENST00000490435 STARD13Q9Y3M8 1113 aa10.04□□□□□ -0.8
ITGA4-211ENST00000490435 USP17L3A6NCW0 530 aa10.03□□□□□ -0.8
ITGA4-211ENST00000490435 USP17L4A6NCW7 530 aa10.03□□□□□ -0.8
ITGA4-211ENST00000490435 ADH7P40394 386 aa10.03□□□□□ -0.8
ITGA4-211ENST00000490435 TRIM28Q13263 835 aaKnown RBP10.03□□□□□ -0.8
ITGA4-211ENST00000490435 USP17L2Q6R6M4 530 aa10.03□□□□□ -0.8
ITGA4-211ENST00000490435 USP17L1Q7RTZ2 530 aa10.03□□□□□ -0.8
ITGA4-211ENST00000490435 MICALL1Q8N3F8 863 aa10.03□□□□□ -0.8
ITGA4-211ENST00000490435 NACC1Q96RE7 527 aa10.03□□□□□ -0.8
ITGA4-211ENST00000490435 BRD7Q9NPI1 651 aa10.03□□□□□ -0.8
ITGA4-211ENST00000490435 KIAA1024Q9UPX6 916 aa10.03□□□□□ -0.8
ITGA4-211ENST00000490435 ALBP02768 609 aa10.02□□□□□ -0.81
ITGA4-211ENST00000490435 KCNQ4P56696 695 aa10.02□□□□□ -0.81
ITGA4-211ENST00000490435 CLDN10P78369 228 aa10.02□□□□□ -0.81
ITGA4-211ENST00000490435 COL9A3Q14050 684 aaPredicted RBP10.02□□□□□ -0.81
ITGA4-211ENST00000490435 HSH2DQ96JZ2 352 aa10.02□□□□□ -0.81
ITGA4-211ENST00000490435 KCNH4Q9UQ05 1017 aa10.02□□□□□ -0.81
ITGA4-211ENST00000490435 HCN4Q9Y3Q4 1203 aa10.02□□□□□ -0.81
ITGA4-211ENST00000490435 SFI1A8K8P3 1242 aa10.01□□□□□ -0.81
ITGA4-211ENST00000490435 M0R2N6 131 aa10.01□□□□□ -0.81
ITGA4-211ENST00000490435 ZMYM1Q5SVZ6 1142 aa10.01□□□□□ -0.81
ITGA4-211ENST00000490435 POTEAQ6S8J7 498 aa10.01□□□□□ -0.81
ITGA4-211ENST00000490435 RAB44Q7Z6P3 723 aaPredicted RBP10.01□□□□□ -0.81
ITGA4-211ENST00000490435 LARGE2Q8N3Y3 721 aa10.01□□□□□ -0.81
ITGA4-211ENST00000490435 PHACTR1Q9C0D0 580 aa10.01□□□□□ -0.81
ITGA4-211ENST00000490435 PALM3A6NDB9 673 aaPredicted RBP10□□□□□ -0.81
ITGA4-211ENST00000490435 FAM229AH3BQW9 127 aa10□□□□□ -0.81
ITGA4-211ENST00000490435 RSPO4Q2I0M5 234 aaPredicted RBP10□□□□□ -0.81
ITGA4-211ENST00000490435 C8orf86Q6ZUL3 223 aa10□□□□□ -0.81
ITGA4-211ENST00000490435 OGFOD1Q8N543 542 aa10□□□□□ -0.81
ITGA4-211ENST00000490435 RBM19Q9Y4C8 960 aaKnown RBP10□□□□□ -0.81
ITGA4-211ENST00000490435 POM121CA8CG34 1229 aa9.99□□□□□ -0.81
ITGA4-211ENST00000490435 ATP9BO43861 1147 aa9.99□□□□□ -0.81
ITGA4-211ENST00000490435 TYRO3Q06418 890 aa9.99□□□□□ -0.81
ITGA4-211ENST00000490435 ADAMTS19Q8TE59 1207 aa9.99□□□□□ -0.81
ITGA4-211ENST00000490435 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
ITGA4-211ENST00000490435 TPSG1Q9NRR2 321 aa9.99□□□□□ -0.81
ITGA4-211ENST00000490435 NID1P14543 1247 aa9.98□□□□□ -0.81
ITGA4-211ENST00000490435 UBTFP17480 764 aaKnown RBP9.98□□□□□ -0.81
ITGA4-211ENST00000490435 NKAPLQ5M9Q1 402 aa9.98□□□□□ -0.81
ITGA4-211ENST00000490435 HDGFL1Q5TGJ6 251 aa9.98□□□□□ -0.81
ITGA4-211ENST00000490435 ZNF280CQ8ND82 737 aa9.98□□□□□ -0.81
ITGA4-211ENST00000490435 MKRN1Q9UHC7 482 aaKnown RBP9.98□□□□□ -0.81
ITGA4-211ENST00000490435 PPP1R12BO60237 982 aaPredicted RBP9.97□□□□□ -0.81
ITGA4-211ENST00000490435 FLIIQ13045 1269 aa9.97□□□□□ -0.81
ITGA4-211ENST00000490435 C20orf204Q6ZNR8 217 aa9.97□□□□□ -0.81
ITGA4-211ENST00000490435 UCN2Q96RP3 112 aa9.97□□□□□ -0.81
ITGA4-211ENST00000490435 LILRB5O75023 590 aa9.96□□□□□ -0.82
ITGA4-211ENST00000490435 GRIK4Q16099 956 aa9.96□□□□□ -0.82
ITGA4-211ENST00000490435 HIF1AQ16665 826 aa9.96□□□□□ -0.82
ITGA4-211ENST00000490435 SIX5Q8N196 739 aa9.96□□□□□ -0.82
ITGA4-211ENST00000490435 TSEN2Q8NCE0 465 aaKnown RBP9.96□□□□□ -0.82
ITGA4-211ENST00000490435 BHMTQ93088 406 aa9.96□□□□□ -0.82
ITGA4-211ENST00000490435 TRAPPC3LQ5T215 181 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms