RNA–Protein interactions for RNA: ENST00000490419.1

HOXB6-204, Transcript of homeobox B6, humanhuman

TSL 3

Gene HOXB6, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB6-204ENST00000490419 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
HOXB6-204ENST00000490419 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
HOXB6-204ENST00000490419 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
HOXB6-204ENST00000490419 MAP3K15Q6ZN16 1313 aa13.18□□□□□ -0.3
HOXB6-204ENST00000490419 CACNA1FO60840 1977 aa13.18□□□□□ -0.3
HOXB6-204ENST00000490419 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
HOXB6-204ENST00000490419 POLRMTO00411 1230 aaKnown RBP13.18□□□□□ -0.3
HOXB6-204ENST00000490419 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
HOXB6-204ENST00000490419 TBC1D9BQ66K14 1250 aa13.18□□□□□ -0.3
HOXB6-204ENST00000490419 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
HOXB6-204ENST00000490419 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
HOXB6-204ENST00000490419 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
HOXB6-204ENST00000490419 CCDC30Q5VVM6 783 aa13.17□□□□□ -0.3
HOXB6-204ENST00000490419 COPS6Q7L5N1 327 aa13.17□□□□□ -0.3
HOXB6-204ENST00000490419 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
HOXB6-204ENST00000490419 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
HOXB6-204ENST00000490419 ZBTB3Q9H5J0 574 aa13.17□□□□□ -0.3
HOXB6-204ENST00000490419 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
HOXB6-204ENST00000490419 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
HOXB6-204ENST00000490419 ANKRD36CQ5JPF3 1778 aa13.17□□□□□ -0.3
HOXB6-204ENST00000490419 C10orf71Q711Q0 1435 aa13.16□□□□□ -0.3
HOXB6-204ENST00000490419 DCAF8L1A6NGE4 600 aa13.16□□□□□ -0.3
HOXB6-204ENST00000490419 E9PSI1 815 aa13.16□□□□□ -0.3
HOXB6-204ENST00000490419 SERPINB2P05120 415 aa13.16□□□□□ -0.3
HOXB6-204ENST00000490419 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
HOXB6-204ENST00000490419 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
HOXB6-204ENST00000490419 HLFQ16534 295 aa13.16□□□□□ -0.3
HOXB6-204ENST00000490419 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
HOXB6-204ENST00000490419 XAGE3Q8WTP9 111 aa13.16□□□□□ -0.3
HOXB6-204ENST00000490419 N4BP2Q86UW6 1770 aaPredicted RBP13.16□□□□□ -0.3
HOXB6-204ENST00000490419 STK31Q9BXU1 1019 aa13.15□□□□□ -0.3
HOXB6-204ENST00000490419 NIP7Q9Y221 180 aaKnown RBP eCLIP13.15□□□□□ -0.3
HOXB6-204ENST00000490419 KIAA1551Q9HCM1 1747 aa13.14□□□□□ -0.31
HOXB6-204ENST00000490419 NPHP1O15259 732 aa13.14□□□□□ -0.31
HOXB6-204ENST00000490419 GIGYF2Q6Y7W6 1299 aaKnown RBP13.14□□□□□ -0.31
HOXB6-204ENST00000490419 ARFGEF2Q9Y6D5 1785 aa13.14□□□□□ -0.31
HOXB6-204ENST00000490419 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
HOXB6-204ENST00000490419 VAMP4O75379 141 aa13.13□□□□□ -0.31
HOXB6-204ENST00000490419 TGFB2P61812 414 aa13.13□□□□□ -0.31
HOXB6-204ENST00000490419 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
HOXB6-204ENST00000490419 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
HOXB6-204ENST00000490419 ANKRD31Q8N7Z5 1873 aa13.12□□□□□ -0.31
HOXB6-204ENST00000490419 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
HOXB6-204ENST00000490419 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
HOXB6-204ENST00000490419 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
HOXB6-204ENST00000490419 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
HOXB6-204ENST00000490419 NBPF5PQ86XG9 351 aaPredicted RBP13.12□□□□□ -0.31
HOXB6-204ENST00000490419 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
HOXB6-204ENST00000490419 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
HOXB6-204ENST00000490419 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
HOXB6-204ENST00000490419 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
HOXB6-204ENST00000490419 PXDNLA1KZ92 1463 aa13.11□□□□□ -0.31
HOXB6-204ENST00000490419 FAM177BA6PVY3 158 aa13.11□□□□□ -0.31
HOXB6-204ENST00000490419 GPTP24298 496 aa13.11□□□□□ -0.31
HOXB6-204ENST00000490419 ST5P78524 1137 aa13.11□□□□□ -0.31
HOXB6-204ENST00000490419 TPTE2Q6XPS3 522 aa13.11□□□□□ -0.31
HOXB6-204ENST00000490419 ZNF34Q8IZ26 560 aa13.11□□□□□ -0.31
HOXB6-204ENST00000490419 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
HOXB6-204ENST00000490419 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
HOXB6-204ENST00000490419 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
HOXB6-204ENST00000490419 DLEC1Q9Y238 1755 aa13.11□□□□□ -0.31
HOXB6-204ENST00000490419 A0A0G2JLW4 131 aa13.1□□□□□ -0.31
HOXB6-204ENST00000490419 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
HOXB6-204ENST00000490419 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
HOXB6-204ENST00000490419 GTF2E1P29083 439 aaPredicted RBP13.1□□□□□ -0.31
HOXB6-204ENST00000490419 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
HOXB6-204ENST00000490419 GPR162Q16538 588 aa13.1□□□□□ -0.31
HOXB6-204ENST00000490419 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
HOXB6-204ENST00000490419 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
HOXB6-204ENST00000490419 DPEP1P16444 411 aa13.09□□□□□ -0.31
HOXB6-204ENST00000490419 PDE6BP35913 854 aa13.09□□□□□ -0.31
HOXB6-204ENST00000490419 PPP1R42Q7Z4L9 355 aa13.09□□□□□ -0.31
HOXB6-204ENST00000490419 TRMT2AQ8IZ69 625 aaKnown RBP13.09□□□□□ -0.31
HOXB6-204ENST00000490419 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
HOXB6-204ENST00000490419 BRIP1Q9BX63 1249 aa13.09□□□□□ -0.31
HOXB6-204ENST00000490419 UBN2Q6ZU65 1347 aa13.09□□□□□ -0.31
HOXB6-204ENST00000490419 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.31
HOXB6-204ENST00000490419 SUSD4Q5VX71 490 aa13.08□□□□□ -0.32
HOXB6-204ENST00000490419 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
HOXB6-204ENST00000490419 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
HOXB6-204ENST00000490419 ARFGEF1Q9Y6D6 1849 aa13.07□□□□□ -0.32
HOXB6-204ENST00000490419 H0YIN7 160 aa13.07□□□□□ -0.32
HOXB6-204ENST00000490419 CHRNA5P30532 468 aa13.07□□□□□ -0.32
HOXB6-204ENST00000490419 FLIIQ13045 1269 aa13.07□□□□□ -0.32
HOXB6-204ENST00000490419 G2E3Q7L622 706 aa13.07□□□□□ -0.32
HOXB6-204ENST00000490419 C2CD5Q86YS7 1000 aa13.07□□□□□ -0.32
HOXB6-204ENST00000490419 UTP14AQ9BVJ6 771 aaKnown RBP13.07□□□□□ -0.32
HOXB6-204ENST00000490419 PIM2Q9P1W9 311 aa13.07□□□□□ -0.32
HOXB6-204ENST00000490419 WWC3Q9ULE0 1092 aa13.07□□□□□ -0.32
HOXB6-204ENST00000490419 CACNA1SQ13698 1873 aa13.07□□□□□ -0.32
HOXB6-204ENST00000490419 CHD4Q14839 1912 aa13.06□□□□□ -0.32
HOXB6-204ENST00000490419 NTSR2O95665 410 aa13.06□□□□□ -0.32
HOXB6-204ENST00000490419 KCNA3P22001 575 aa13.06□□□□□ -0.32
HOXB6-204ENST00000490419 KSR2Q6VAB6 950 aa13.06□□□□□ -0.32
HOXB6-204ENST00000490419 NLRP10Q86W26 655 aa13.06□□□□□ -0.32
HOXB6-204ENST00000490419 NUTM1Q86Y26 1132 aa13.06□□□□□ -0.32
HOXB6-204ENST00000490419 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
HOXB6-204ENST00000490419 ISCA1Q9BUE6 129 aa13.06□□□□□ -0.32
HOXB6-204ENST00000490419 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
HOXB6-204ENST00000490419 PI4KAP2A4QPH2 592 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms