RNA–Protein interactions for RNA: ENST00000490137.1

PTPN18-214, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-214ENST00000490137 SSFA2P28290 1259 aa8.87□□□□□ -0.99
PTPN18-214ENST00000490137 RGS19P49795 217 aa8.87□□□□□ -0.99
PTPN18-214ENST00000490137 POTEGQ6S5H5 508 aa8.87□□□□□ -0.99
PTPN18-214ENST00000490137 ATF7IPQ6VMQ6 1270 aa8.87□□□□□ -0.99
PTPN18-214ENST00000490137 ARHGAP45Q92619 1136 aa8.87□□□□□ -0.99
PTPN18-214ENST00000490137 SYTL4Q96C24 671 aaPredicted RBP8.87□□□□□ -0.99
PTPN18-214ENST00000490137 C4BP0C0L5 1744 aa8.87□□□□□ -0.99
PTPN18-214ENST00000490137 COL3A1P02461 1466 aaPredicted RBP8.86□□□□□ -0.99
PTPN18-214ENST00000490137 POTEB2H3BUK9 544 aa8.86□□□□□ -0.99
PTPN18-214ENST00000490137 RLBP1P12271 317 aa8.86□□□□□ -0.99
PTPN18-214ENST00000490137 KCNQ4P56696 695 aa8.86□□□□□ -0.99
PTPN18-214ENST00000490137 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
PTPN18-214ENST00000490137 GRPEL1Q9HAV7 217 aa8.86□□□□□ -0.99
PTPN18-214ENST00000490137 MTHFSP49914 203 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 NUCB1Q02818 461 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 MLLT1Q03111 559 aaPredicted RBP8.85□□□□□ -0.99
PTPN18-214ENST00000490137 RAB3GAP1Q15042 981 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 HS1BP3Q53T59 392 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 ARHGAP27Q6ZUM4 889 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 ANKRD24Q8TF21 1146 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 CABP2Q9NPB3 220 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 SMC4Q9NTJ3 1288 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 ZBTB40Q9NUA8 1239 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 BCS1LQ9Y276 419 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 ANKRD26Q9UPS8 1709 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 TOGARAM1Q9Y4F4 1720 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 KCPQ6ZWJ8 1503 aa8.85□□□□□ -0.99
PTPN18-214ENST00000490137 CTCFP49711 727 aaPredicted RBP8.84□□□□□ -0.99
PTPN18-214ENST00000490137 CCDC173Q0VFZ6 552 aa8.84□□□□□ -0.99
PTPN18-214ENST00000490137 C9orf131Q5VYM1 1079 aa8.84□□□□□ -0.99
PTPN18-214ENST00000490137 ANP32BQ92688 251 aaKnown RBP8.84□□□□□ -0.99
PTPN18-214ENST00000490137 SMARCC1Q92922 1105 aaPredicted RBP8.84□□□□□ -0.99
PTPN18-214ENST00000490137 TRIM44Q96DX7 344 aaPredicted RBP8.84□□□□□ -0.99
PTPN18-214ENST00000490137 AK7Q96M32 723 aa8.84□□□□□ -0.99
PTPN18-214ENST00000490137 RRAGDQ9NQL2 400 aaPredicted RBP8.84□□□□□ -0.99
PTPN18-214ENST00000490137 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.84□□□□□ -0.99
PTPN18-214ENST00000490137 PCNTO95613 3336 aa8.83□□□□□ -1
PTPN18-214ENST00000490137 ESPNB1AK53 854 aa8.83□□□□□ -1
PTPN18-214ENST00000490137 GALR2O43603 387 aaPredicted RBP8.83□□□□□ -1
PTPN18-214ENST00000490137 HSP90AA1P07900 732 aaKnown RBP8.83□□□□□ -1
PTPN18-214ENST00000490137 U2AF1L5P0DN76 240 aaPredicted RBP8.83□□□□□ -1
PTPN18-214ENST00000490137 TRIM27P14373 513 aa8.83□□□□□ -1
PTPN18-214ENST00000490137 VEGFAP15692 232 aaPredicted RBP8.83□□□□□ -1
PTPN18-214ENST00000490137 TMPOP42166 694 aaKnown RBP8.83□□□□□ -1
PTPN18-214ENST00000490137 U2AF1Q01081 240 aaKnown RBP eCLIP8.83□□□□□ -1
PTPN18-214ENST00000490137 ZNF579Q8NAF0 562 aaKnown RBP8.83□□□□□ -1
PTPN18-214ENST00000490137 ZCRB1Q8TBF4 217 aaKnown RBP8.83□□□□□ -1
PTPN18-214ENST00000490137 PLEKHF1Q96S99 279 aa8.83□□□□□ -1
PTPN18-214ENST00000490137 RRAGCQ9HB90 399 aa8.83□□□□□ -1
PTPN18-214ENST00000490137 CREBZFQ9NS37 354 aa8.83□□□□□ -1
PTPN18-214ENST00000490137 TERF2IPQ9NYB0 399 aa8.83□□□□□ -1
PTPN18-214ENST00000490137 N4BP2Q86UW6 1770 aaPredicted RBP8.83□□□□□ -1
PTPN18-214ENST00000490137 SBF1O95248 1867 aa8.83□□□□□ -1
PTPN18-214ENST00000490137 MON2Q7Z3U7 1717 aa8.83□□□□□ -1
PTPN18-214ENST00000490137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.82□□□□□ -1
PTPN18-214ENST00000490137 MFAP1P55081 439 aaKnown RBP8.82□□□□□ -1
PTPN18-214ENST00000490137 NLGN1Q8N2Q7 840 aa8.82□□□□□ -1
PTPN18-214ENST00000490137 PPP1R9BQ96SB3 815 aa8.82□□□□□ -1
PTPN18-214ENST00000490137 PALLDQ8WX93 1383 aa8.82□□□□□ -1
PTPN18-214ENST00000490137 K7ELQ4 463 aaPredicted RBP8.81□□□□□ -1
PTPN18-214ENST00000490137 FCHSD2O94868 740 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 HSP90AB1P08238 724 aaKnown RBP8.81□□□□□ -1
PTPN18-214ENST00000490137 NUCB2P80303 420 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 KLHL40Q2TBA0 621 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 CHD1LQ86WJ1 897 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 ITPRIPQ8IWB1 547 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 IP6K1Q92551 441 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 AIDAQ96BJ3 306 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 ABHD8Q96I13 439 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 DCAF5Q96JK2 942 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 MAP7D2Q96T17 732 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 SLC12A5Q9H2X9 1139 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 CCDC87Q9NVE4 849 aa8.81□□□□□ -1
PTPN18-214ENST00000490137 KDM6AO15550 1401 aaPredicted RBP8.8□□□□□ -1
PTPN18-214ENST00000490137 FOXN1O15353 648 aa8.8□□□□□ -1
PTPN18-214ENST00000490137 SOX12O15370 315 aa8.8□□□□□ -1
PTPN18-214ENST00000490137 MCM5P33992 734 aa8.8□□□□□ -1
PTPN18-214ENST00000490137 LMOD3Q0VAK6 560 aa8.8□□□□□ -1
PTPN18-214ENST00000490137 SSH1Q8WYL5 1049 aa8.8□□□□□ -1
PTPN18-214ENST00000490137 CWC22Q9HCG8 908 aaKnown RBP8.8□□□□□ -1
PTPN18-214ENST00000490137 PIM2Q9P1W9 311 aa8.8□□□□□ -1
PTPN18-214ENST00000490137 GLTPD2A6NH11 291 aa8.79□□□□□ -1
PTPN18-214ENST00000490137 CDC45O75419 566 aa8.79□□□□□ -1
PTPN18-214ENST00000490137 MMP10P09238 476 aa8.79□□□□□ -1
PTPN18-214ENST00000490137 ZNF445P59923 1031 aa8.79□□□□□ -1
PTPN18-214ENST00000490137 EXOSC9Q06265 439 aaKnown RBP8.79□□□□□ -1
PTPN18-214ENST00000490137 RABEP1Q15276 862 aa8.79□□□□□ -1
PTPN18-214ENST00000490137 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.79□□□□□ -1
PTPN18-214ENST00000490137 MTERF4Q7Z6M4 381 aaKnown RBP8.79□□□□□ -1
PTPN18-214ENST00000490137 TNPO1Q92973 898 aaKnown RBP8.79□□□□□ -1
PTPN18-214ENST00000490137 NAP1L5Q96NT1 182 aaPredicted RBP8.79□□□□□ -1
PTPN18-214ENST00000490137 RNF181Q9P0P0 153 aa8.79□□□□□ -1
PTPN18-214ENST00000490137 TRIM35Q9UPQ4 493 aa8.79□□□□□ -1
PTPN18-214ENST00000490137 C4AP0C0L4 1744 aa8.79□□□□□ -1
PTPN18-214ENST00000490137 MAP2P11137 1827 aaKnown RBP8.78□□□□□ -1
PTPN18-214ENST00000490137 CNTNAP1P78357 1384 aa8.78□□□□□ -1
PTPN18-214ENST00000490137 A0A0G2JLW4 131 aa8.78□□□□□ -1
PTPN18-214ENST00000490137 DPEP1P16444 411 aa8.78□□□□□ -1
PTPN18-214ENST00000490137 HSP90AA2PQ14568 343 aaPredicted RBP8.78□□□□□ -1
PTPN18-214ENST00000490137 DALRD3Q5D0E6 543 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms