RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 NEFLP07196 543 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 FKBP8Q14318 412 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 SLC4A10Q6U841 1118 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 ATF7IPQ6VMQ6 1270 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 TMEM57Q8N5G2 664 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 HYPKQ9NX55 129 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 COG6Q9Y2V7 657 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 CNTNAP4Q9C0A0 1308 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 COL24A1Q17RW2 1714 aa9.48□□□□□ -0.89
CPA4-208ENST00000490117 PXDNLA1KZ92 1463 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 PI4KAP2A4QPH2 592 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 BRPF1P55201 1214 aaPredicted RBP9.47□□□□□ -0.89
CPA4-208ENST00000490117 SF3B2Q13435 895 aaKnown RBP9.47□□□□□ -0.89
CPA4-208ENST00000490117 ZNF827Q17R98 1081 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
CPA4-208ENST00000490117 DZIP1LQ8IYY4 767 aaKnown RBP9.47□□□□□ -0.89
CPA4-208ENST00000490117 PI4KAP1Q8N8J0 262 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 EXOC6Q8TAG9 804 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 AK7Q96M32 723 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 API5Q9BZZ5 524 aaKnown RBP9.47□□□□□ -0.89
CPA4-208ENST00000490117 TBC1D2BQ9UPU7 963 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 MAP3K2Q9Y2U5 619 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 ABCC4O15439 1325 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 PTPRCP08575 1304 aa9.47□□□□□ -0.89
CPA4-208ENST00000490117 DDX60Q8IY21 1712 aaKnown RBP9.47□□□□□ -0.89
CPA4-208ENST00000490117 PLSCR1O15162 318 aa9.46□□□□□ -0.9
CPA4-208ENST00000490117 IPO8O15397 1037 aaKnown RBP9.46□□□□□ -0.9
CPA4-208ENST00000490117 BAG6P46379 1132 aa9.46□□□□□ -0.9
CPA4-208ENST00000490117 ITPRIPQ8IWB1 547 aa9.46□□□□□ -0.9
CPA4-208ENST00000490117 CAMKK2Q96RR4 588 aa9.46□□□□□ -0.9
CPA4-208ENST00000490117 ANO8Q9HCE9 1232 aaPredicted RBP9.46□□□□□ -0.9
CPA4-208ENST00000490117 CACNA1SQ13698 1873 aa9.45□□□□□ -0.9
CPA4-208ENST00000490117 IL6STP40189 918 aaPredicted RBP9.45□□□□□ -0.9
CPA4-208ENST00000490117 EIF5P55010 431 aaKnown RBP9.45□□□□□ -0.9
CPA4-208ENST00000490117 HLFQ16534 295 aa9.45□□□□□ -0.9
CPA4-208ENST00000490117 SLC27A3Q5K4L6 730 aa9.45□□□□□ -0.9
CPA4-208ENST00000490117 KIF6Q6ZMV9 814 aa9.45□□□□□ -0.9
CPA4-208ENST00000490117 RIC3Q7Z5B4 369 aa9.45□□□□□ -0.9
CPA4-208ENST00000490117 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
CPA4-208ENST00000490117 DNAAF4Q8WXU2 420 aa9.45□□□□□ -0.9
CPA4-208ENST00000490117 MYD88Q99836 296 aa9.45□□□□□ -0.9
CPA4-208ENST00000490117 SRP68Q9UHB9 627 aaKnown RBP9.45□□□□□ -0.9
CPA4-208ENST00000490117 ATP5J2-PTCD1G3V325 749 aa9.44□□□□□ -0.9
CPA4-208ENST00000490117 RPS6KA4O75676 772 aa9.44□□□□□ -0.9
CPA4-208ENST00000490117 MVPQ14764 893 aaKnown RBP9.44□□□□□ -0.9
CPA4-208ENST00000490117 CWF19L2Q2TBE0 894 aaKnown RBP9.44□□□□□ -0.9
CPA4-208ENST00000490117 KSR2Q6VAB6 950 aa9.44□□□□□ -0.9
CPA4-208ENST00000490117 ARHGAP45Q92619 1136 aa9.44□□□□□ -0.9
CPA4-208ENST00000490117 UPF1Q92900 1129 aaKnown RBP eCLIP9.44□□□□□ -0.9
CPA4-208ENST00000490117 CHMP4AQ9BY43 222 aa9.44□□□□□ -0.9
CPA4-208ENST00000490117 GTF3C3Q9Y5Q9 886 aa9.44□□□□□ -0.9
CPA4-208ENST00000490117 MAP3K15Q6ZN16 1313 aa9.44□□□□□ -0.9
CPA4-208ENST00000490117 TAF1P21675 1872 aa9.44□□□□□ -0.9
CPA4-208ENST00000490117 TNRC6CQ9HCJ0 1690 aaKnown RBP9.43□□□□□ -0.9
CPA4-208ENST00000490117 DDX58O95786 925 aaKnown RBP9.43□□□□□ -0.9
CPA4-208ENST00000490117 GPTP24298 496 aa9.43□□□□□ -0.9
CPA4-208ENST00000490117 PDE3AQ14432 1141 aa9.43□□□□□ -0.9
CPA4-208ENST00000490117 RC3H1Q5TC82 1133 aaKnown RBP9.43□□□□□ -0.9
CPA4-208ENST00000490117 ANKRD13DQ6ZTN6 518 aa9.43□□□□□ -0.9
CPA4-208ENST00000490117 NPM2Q86SE8 214 aaKnown RBP9.43□□□□□ -0.9
CPA4-208ENST00000490117 PLBD2Q8NHP8 589 aa9.43□□□□□ -0.9
CPA4-208ENST00000490117 JARID2Q92833 1246 aaPredicted RBP9.43□□□□□ -0.9
CPA4-208ENST00000490117 C1orf115Q9H7X2 142 aa9.43□□□□□ -0.9
CPA4-208ENST00000490117 RTCBQ9Y3I0 505 aaKnown RBP9.43□□□□□ -0.9
CPA4-208ENST00000490117 ANKRD31Q8N7Z5 1873 aa9.42□□□□□ -0.9
CPA4-208ENST00000490117 ATP10DQ9P241 1426 aa9.42□□□□□ -0.9
CPA4-208ENST00000490117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
CPA4-208ENST00000490117 CAMTA2O94983 1202 aa9.42□□□□□ -0.9
CPA4-208ENST00000490117 IGKV5-2P06315 115 aa9.42□□□□□ -0.9
CPA4-208ENST00000490117 BEND3Q5T5X7 828 aa9.42□□□□□ -0.9
CPA4-208ENST00000490117 USPL1Q5W0Q7 1092 aa9.42□□□□□ -0.9
CPA4-208ENST00000490117 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
CPA4-208ENST00000490117 AKT1S1Q96B36 256 aa9.42□□□□□ -0.9
CPA4-208ENST00000490117 MEIS3Q99687 375 aa9.42□□□□□ -0.9
CPA4-208ENST00000490117 METTL22Q9BUU2 404 aaPredicted RBP9.42□□□□□ -0.9
CPA4-208ENST00000490117 FAM177BA6PVY3 158 aa9.41□□□□□ -0.9
CPA4-208ENST00000490117 MS4A1P11836 297 aa9.41□□□□□ -0.9
CPA4-208ENST00000490117 INTS3Q68E01 1043 aaKnown RBP9.41□□□□□ -0.9
CPA4-208ENST00000490117 SRCIN1Q9C0H9 1055 aa9.41□□□□□ -0.9
CPA4-208ENST00000490117 BCL2L12Q9HB09 334 aa9.41□□□□□ -0.9
CPA4-208ENST00000490117 TFCP2L1Q9NZI6 479 aa9.41□□□□□ -0.9
CPA4-208ENST00000490117 UBN2Q6ZU65 1347 aa9.4□□□□□ -0.9
CPA4-208ENST00000490117 PNPLA7Q6ZV29 1317 aa9.4□□□□□ -0.9
CPA4-208ENST00000490117 USP42Q9H9J4 1324 aaKnown RBP9.4□□□□□ -0.9
CPA4-208ENST00000490117 A0A087WZG4 1122 aa9.4□□□□□ -0.9
CPA4-208ENST00000490117 NEURL1BA8MQ27 555 aa9.4□□□□□ -0.9
CPA4-208ENST00000490117 RFC4P35249 363 aa9.4□□□□□ -0.9
CPA4-208ENST00000490117 CCT4P50991 539 aaKnown RBP9.4□□□□□ -0.9
CPA4-208ENST00000490117 RTL5Q5HYW3 569 aaPredicted RBP9.4□□□□□ -0.9
CPA4-208ENST00000490117 TRAPPC3LQ5T215 181 aa9.4□□□□□ -0.9
CPA4-208ENST00000490117 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.9
CPA4-208ENST00000490117 BICDL1Q6ZP65 573 aa9.4□□□□□ -0.9
CPA4-208ENST00000490117 STK32BQ9NY57 414 aa9.4□□□□□ -0.9
CPA4-208ENST00000490117 NARFQ9UHQ1 456 aa9.4□□□□□ -0.9
CPA4-208ENST00000490117 A0A1B0GUL6 1792 aa9.4□□□□□ -0.91
CPA4-208ENST00000490117 COL11A2P13942 1736 aaPredicted RBP9.39□□□□□ -0.91
CPA4-208ENST00000490117 NRXN2Q9P2S2 1712 aa9.39□□□□□ -0.91
CPA4-208ENST00000490117 SSFA2P28290 1259 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms