RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 PIK3C2GO75747 1445 aa6.04□□□□□ -1.44
RTN1-207ENST00000490111 RECKO95980 971 aa6.03□□□□□ -1.44
RTN1-207ENST00000490111 HSPA8P11142 646 aaKnown RBP6.03□□□□□ -1.44
RTN1-207ENST00000490111 NPAS4Q8IUM7 802 aa6.03□□□□□ -1.44
RTN1-207ENST00000490111 FLAD1Q8NFF5 587 aa6.03□□□□□ -1.44
RTN1-207ENST00000490111 MICAL1Q8TDZ2 1067 aa6.03□□□□□ -1.44
RTN1-207ENST00000490111 NUDT16Q96DE0 195 aaKnown RBP6.03□□□□□ -1.44
RTN1-207ENST00000490111 FAM217BQ9NTX9 383 aaPredicted RBP6.03□□□□□ -1.44
RTN1-207ENST00000490111 WBP1LQ9NX94 342 aa6.03□□□□□ -1.44
RTN1-207ENST00000490111 PPME1Q9Y570 386 aa6.03□□□□□ -1.44
RTN1-207ENST00000490111 ABCC6O95255 1503 aa6.03□□□□□ -1.44
RTN1-207ENST00000490111 ITSN1Q15811 1721 aa6.02□□□□□ -1.45
RTN1-207ENST00000490111 PKD1L3Q7Z443 1732 aa6.02□□□□□ -1.45
RTN1-207ENST00000490111 ACEP12821 1306 aa6.02□□□□□ -1.45
RTN1-207ENST00000490111 VEGFAP15692 232 aaPredicted RBP6.02□□□□□ -1.45
RTN1-207ENST00000490111 LMOD1P29536 600 aaPredicted RBP6.02□□□□□ -1.45
RTN1-207ENST00000490111 PRPF38BQ5VTL8 546 aaKnown RBP6.02□□□□□ -1.45
RTN1-207ENST00000490111 PHLDB3Q6NSJ2 640 aa6.02□□□□□ -1.45
RTN1-207ENST00000490111 DPH6Q7L8W6 267 aa6.02□□□□□ -1.45
RTN1-207ENST00000490111 PHOX2BQ99453 314 aa6.02□□□□□ -1.45
RTN1-207ENST00000490111 CCNL1Q9UK58 526 aaPredicted RBP6.02□□□□□ -1.45
RTN1-207ENST00000490111 COL18A1P39060 1754 aa6.02□□□□□ -1.45
RTN1-207ENST00000490111 POLR3AO14802 1390 aaPredicted RBP6.02□□□□□ -1.45
RTN1-207ENST00000490111 CCDC7Q96M83 1385 aa6.02□□□□□ -1.45
RTN1-207ENST00000490111 LY75O60449 1722 aa6.02□□□□□ -1.45
RTN1-207ENST00000490111 PCNTO95613 3336 aa6.01□□□□□ -1.45
RTN1-207ENST00000490111 PPIP5K1Q6PFW1 1433 aa6.01□□□□□ -1.45
RTN1-207ENST00000490111 TGFB2P61812 414 aa6.01□□□□□ -1.45
RTN1-207ENST00000490111 IRX6P78412 446 aaPredicted RBP6.01□□□□□ -1.45
RTN1-207ENST00000490111 UCN2Q96RP3 112 aa6.01□□□□□ -1.45
RTN1-207ENST00000490111 RNF181Q9P0P0 153 aa6.01□□□□□ -1.45
RTN1-207ENST00000490111 SUGT1Q9Y2Z0 365 aa6.01□□□□□ -1.45
RTN1-207ENST00000490111 CNTNAP1P78357 1384 aa6.01□□□□□ -1.45
RTN1-207ENST00000490111 SPATA31E1Q6ZUB1 1445 aa6□□□□□ -1.45
RTN1-207ENST00000490111 A0A0G2JLW4 131 aa6□□□□□ -1.45
RTN1-207ENST00000490111 RAB11FIP3O75154 756 aa6□□□□□ -1.45
RTN1-207ENST00000490111 C7P10643 843 aa6□□□□□ -1.45
RTN1-207ENST00000490111 DSG3P32926 999 aa6□□□□□ -1.45
RTN1-207ENST00000490111 PRIM1P49642 420 aaKnown RBP6□□□□□ -1.45
RTN1-207ENST00000490111 VEGFBP49765 207 aa6□□□□□ -1.45
RTN1-207ENST00000490111 SPDYE1Q8NFV5 336 aaPredicted RBP6□□□□□ -1.45
RTN1-207ENST00000490111 LIMD1Q9UGP4 676 aa6□□□□□ -1.45
RTN1-207ENST00000490111 N4BP2Q86UW6 1770 aaPredicted RBP5.99□□□□□ -1.45
RTN1-207ENST00000490111 RGPD5Q99666 1765 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 USP54Q70EL1 1684 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 SOWAHDA6NJG2 315 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 PRR29P0C7W0 189 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 HMGB2P26583 209 aaKnown RBP5.99□□□□□ -1.45
RTN1-207ENST00000490111 DSG2Q14126 1118 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 WASHC4Q2M389 1173 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 CDCA8Q53HL2 280 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 NOP9Q86U38 636 aaKnown RBP5.99□□□□□ -1.45
RTN1-207ENST00000490111 EXOC8Q8IYI6 725 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 SYTL4Q96C24 671 aaPredicted RBP5.99□□□□□ -1.45
RTN1-207ENST00000490111 MPHOSPH9Q99550 1183 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 RNF39Q9H2S5 420 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 ALG2Q9H553 416 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 TRAK1Q9UPV9 953 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 KIAA1551Q9HCM1 1747 aa5.99□□□□□ -1.45
RTN1-207ENST00000490111 QRICH2Q9H0J4 1663 aa5.98□□□□□ -1.45
RTN1-207ENST00000490111 VIRMAQ69YN4 1812 aaKnown RBP5.98□□□□□ -1.45
RTN1-207ENST00000490111 GLTPD2A6NH11 291 aa5.98□□□□□ -1.45
RTN1-207ENST00000490111 GPR37L1O60883 481 aa5.98□□□□□ -1.45
RTN1-207ENST00000490111 IL2RBP14784 551 aa5.98□□□□□ -1.45
RTN1-207ENST00000490111 MARSP56192 900 aaKnown RBP5.98□□□□□ -1.45
RTN1-207ENST00000490111 MAP2K1Q02750 393 aaPredicted RBP5.98□□□□□ -1.45
RTN1-207ENST00000490111 SMIM5Q71RC9 77 aa5.98□□□□□ -1.45
RTN1-207ENST00000490111 TSPYL2Q9H2G4 693 aaPredicted RBP5.98□□□□□ -1.45
RTN1-207ENST00000490111 TFIP11Q9UBB9 837 aaKnown RBP5.98□□□□□ -1.45
RTN1-207ENST00000490111 FARP1Q9Y4F1 1045 aaPredicted RBP5.98□□□□□ -1.45
RTN1-207ENST00000490111 CCDC61Q9Y6R9 512 aa5.98□□□□□ -1.45
RTN1-207ENST00000490111 SLIT3O75094 1523 aa5.98□□□□□ -1.45
RTN1-207ENST00000490111 CPSF1Q10570 1443 aaKnown RBP5.98□□□□□ -1.45
RTN1-207ENST00000490111 ERBB3P21860 1342 aa5.98□□□□□ -1.45
RTN1-207ENST00000490111 KIF13BQ9NQT8 1826 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 ANKRD36BQ8N2N9 1353 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 ANKRD33BA6NCL7 494 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 DLL1O00548 723 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 TPD52L2O43399 206 aaKnown RBP5.97□□□□□ -1.45
RTN1-207ENST00000490111 DPEP1P16444 411 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 TUSC1Q2TAM9 212 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 ARHGEF25Q86VW2 580 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 DDX54Q8TDD1 881 aaKnown RBP5.97□□□□□ -1.45
RTN1-207ENST00000490111 MCOLN1Q9GZU1 580 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 MYH16Q9H6N6 1097 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 RBM27Q9P2N5 1060 aaKnown RBP5.97□□□□□ -1.45
RTN1-207ENST00000490111 MAFBQ9Y5Q3 323 aaPredicted RBP5.97□□□□□ -1.45
RTN1-207ENST00000490111 NDUFB9Q9Y6M9 179 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 C5P01031 1676 aa5.97□□□□□ -1.45
RTN1-207ENST00000490111 NSD2O96028 1365 aa5.96□□□□□ -1.45
RTN1-207ENST00000490111 KAT6BQ8WYB5 2073 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 POTECB2RU33 542 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 ELOAQ14241 798 aaKnown RBP5.96□□□□□ -1.46
RTN1-207ENST00000490111 TMEM164Q5U3C3 297 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 CHADLQ6NUI6 762 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 FBXO33Q7Z6M2 555 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 IFNL1Q8IU54 200 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 GCC1Q96CN9 775 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 GPATCH3Q96I76 525 aa5.96□□□□□ -1.46
RTN1-207ENST00000490111 CDK19Q9BWU1 502 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms