RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CKAP4Q07065 602 aaKnown RBP10.22□□□□□ -0.77
LSAMP-205ENST00000490035 ZNF444Q8N0Y2 327 aaPredicted RBP10.22□□□□□ -0.77
LSAMP-205ENST00000490035 SREK1Q8WXA9 508 aaKnown RBP10.22□□□□□ -0.77
LSAMP-205ENST00000490035 CCDC171Q6TFL3 1326 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 STRN4Q9NRL3 753 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 TMOD3Q9NYL9 352 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 BAG3O95817 575 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 NUTM2GQ5VZR2 741 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 CENPHQ9H3R5 247 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 ARHGEF11O15085 1522 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 CDK13Q14004 1512 aaKnown RBP10.22□□□□□ -0.77
LSAMP-205ENST00000490035 USP5P45974 858 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 PDE4BQ07343 736 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 RBM5P52756 815 aaKnown RBP eCLIP10.22□□□□□ -0.77
LSAMP-205ENST00000490035 ZSCAN29Q8IWY8 852 aaPredicted RBP10.21□□□□□ -0.77
LSAMP-205ENST00000490035 MTMR7Q9Y216 660 aa10.21□□□□□ -0.77
LSAMP-205ENST00000490035 SPECC1LQ69YQ0 1117 aa10.21□□□□□ -0.77
LSAMP-205ENST00000490035 CNNM3Q8NE01 707 aa10.21□□□□□ -0.77
LSAMP-205ENST00000490035 CDC5LQ99459 802 aaKnown RBP10.21□□□□□ -0.77
LSAMP-205ENST00000490035 SEPT11Q9NVA2 429 aaKnown RBP10.21□□□□□ -0.77
LSAMP-205ENST00000490035 IDH1O75874 414 aaKnown RBP10.21□□□□□ -0.77
LSAMP-205ENST00000490035 DYNC1I1O14576 645 aa10.21□□□□□ -0.78
LSAMP-205ENST00000490035 PUS7Q96PZ0 661 aaKnown RBP10.21□□□□□ -0.78
LSAMP-205ENST00000490035 GSTO1P78417 241 aa10.21□□□□□ -0.78
LSAMP-205ENST00000490035 SRRTQ9BXP5 876 aaKnown RBP10.21□□□□□ -0.78
LSAMP-205ENST00000490035 DZIP1Q86YF9 867 aaKnown RBP10.2□□□□□ -0.78
LSAMP-205ENST00000490035 CNNM2Q9H8M5 875 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.2□□□□□ -0.78
LSAMP-205ENST00000490035 CD109Q6YHK3 1445 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 NBPF7P0C2Y1 421 aaPredicted RBP10.2□□□□□ -0.78
LSAMP-205ENST00000490035 SYCE3A1L190 88 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 SPAG1Q07617 926 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 KIF4BQ2VIQ3 1234 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 SSBP05455 408 aaKnown RBP eCLIP10.2□□□□□ -0.78
LSAMP-205ENST00000490035 GNAQP50148 359 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 IFFO1Q0D2I5 559 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 STMN4Q9H169 189 aaPredicted RBP10.2□□□□□ -0.78
LSAMP-205ENST00000490035 CCDC194A0A1B0GVG4 234 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 POLR3DP05423 398 aaPredicted RBP10.2□□□□□ -0.78
LSAMP-205ENST00000490035 DNAAF4Q8WXU2 420 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 CLIP2Q9UDT6 1046 aa10.2□□□□□ -0.78
LSAMP-205ENST00000490035 CFAP65Q6ZU64 1925 aaKnown RBP10.2□□□□□ -0.78
LSAMP-205ENST00000490035 ATL3Q6DD88 541 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 DDX54Q8TDD1 881 aaKnown RBP10.19□□□□□ -0.78
LSAMP-205ENST00000490035 ADGBQ8N7X0 1667 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 GRIN2AQ12879 1464 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 UQCRFS1P1P0C7P4 283 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 KCNG4Q8TDN1 519 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 HDAC1Q13547 482 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-205ENST00000490035 NBPF8Q3BBV2 869 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 NUP88Q99567 741 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-205ENST00000490035 SPATA24Q86W54 205 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 KRT23Q9C075 422 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 CCDC175P0C221 793 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 CRACR2BQ8N4Y2 399 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-205ENST00000490035 GIMAP7Q8NHV1 300 aa10.19□□□□□ -0.78
LSAMP-205ENST00000490035 C6orf163Q5TEZ5 329 aa10.18□□□□□ -0.78
LSAMP-205ENST00000490035 FAM177A1Q8N128 213 aaPredicted RBP10.18□□□□□ -0.78
LSAMP-205ENST00000490035 ECHDC1Q9NTX5 307 aa10.18□□□□□ -0.78
LSAMP-205ENST00000490035 KLHL40Q2TBA0 621 aa10.18□□□□□ -0.78
LSAMP-205ENST00000490035 HS1BP3Q53T59 392 aa10.18□□□□□ -0.78
LSAMP-205ENST00000490035 KIF4AO95239 1232 aa10.18□□□□□ -0.78
LSAMP-205ENST00000490035 ABCC5O15440 1437 aa10.18□□□□□ -0.78
LSAMP-205ENST00000490035 PPP1R2P41236 205 aa10.18□□□□□ -0.78
LSAMP-205ENST00000490035 ERMNQ8TAM6 284 aa10.18□□□□□ -0.78
LSAMP-205ENST00000490035 BMS1Q14692 1282 aaKnown RBP10.17□□□□□ -0.78
LSAMP-205ENST00000490035 SKIDA1Q1XH10 827 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 CEP128Q6ZU80 1094 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 SELENOOQ9BVL4 669 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 GSTTP1A0A1W2PQM5 241 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 IVLP07476 585 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 FSD2A1L4K1 749 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 STX6O43752 255 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 CCDC102BQ68D86 513 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 PPP1R42Q7Z4L9 355 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 DHX37Q8IY37 1157 aaKnown RBP10.17□□□□□ -0.78
LSAMP-205ENST00000490035 NCOA7Q8NI08 942 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 ABCF2Q9UG63 623 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 DMRT2Q9Y5R5 561 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 ANKRD24Q8TF21 1146 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 SSH1Q8WYL5 1049 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 TBC1D5Q92609 795 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 TEX14Q8IWB6 1497 aa10.17□□□□□ -0.78
LSAMP-205ENST00000490035 CWC25Q9NXE8 425 aaPredicted RBP10.17□□□□□ -0.78
LSAMP-205ENST00000490035 HLA-DOAP06340 250 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 NLRP5P59047 1200 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.16□□□□□ -0.78
LSAMP-205ENST00000490035 V9GYY5 206 aaPredicted RBP10.16□□□□□ -0.78
LSAMP-205ENST00000490035 IFIT3O14879 490 aaKnown RBP10.16□□□□□ -0.78
LSAMP-205ENST00000490035 IARSP41252 1262 aaKnown RBP10.16□□□□□ -0.78
LSAMP-205ENST00000490035 ZFYVE9O95405 1425 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 A6NNZ2 444 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 TUBB8Q3ZCM7 444 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 WASLO00401 505 aaPredicted RBP10.16□□□□□ -0.78
LSAMP-205ENST00000490035 CYLC1P35663 651 aaPredicted RBP10.16□□□□□ -0.78
LSAMP-205ENST00000490035 FERMT2Q96AC1 680 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 GOLGA8BA8MQT2 603 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 B4DLN1 442 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 GNAT2P19087 354 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 SSR1P43307 286 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms