RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ZNF622Q969S3 477 aaKnown RBP eCLIP25.69■■□□□ 1.7
TNFRSF1B-202ENST00000489921 RGL2O15211 777 aa25.68■■□□□ 1.7
TNFRSF1B-202ENST00000489921 SRGNP10124 158 aa25.68■■□□□ 1.7
TNFRSF1B-202ENST00000489921 LMNB1P20700 586 aa25.68■■□□□ 1.7
TNFRSF1B-202ENST00000489921 HLFQ16534 295 aa25.68■■□□□ 1.7
TNFRSF1B-202ENST00000489921 PNNQ9H307 717 aaKnown RBP25.68■■□□□ 1.7
TNFRSF1B-202ENST00000489921 ARFGEF2Q9Y6D5 1785 aa25.68■■□□□ 1.7
TNFRSF1B-202ENST00000489921 TNRC6CQ9HCJ0 1690 aaKnown RBP25.67■■□□□ 1.7
TNFRSF1B-202ENST00000489921 MAPK8IP3Q9UPT6 1336 aa25.66■■□□□ 1.7
TNFRSF1B-202ENST00000489921 TIAM2Q8IVF5 1701 aa25.66■■□□□ 1.7
TNFRSF1B-202ENST00000489921 NUP98P52948 1817 aa25.66■■□□□ 1.7
TNFRSF1B-202ENST00000489921 DICER1Q9UPY3 1922 aaKnown RBP25.65■■□□□ 1.7
TNFRSF1B-202ENST00000489921 C21orf2O43822 256 aa25.65■■□□□ 1.7
TNFRSF1B-202ENST00000489921 ST5P78524 1137 aa25.65■■□□□ 1.7
TNFRSF1B-202ENST00000489921 ZNF652Q9Y2D9 606 aa25.65■■□□□ 1.7
TNFRSF1B-202ENST00000489921 KDM2BQ8NHM5 1336 aa25.64■■□□□ 1.7
TNFRSF1B-202ENST00000489921 ZC3H4Q9UPT8 1303 aaKnown RBP25.64■■□□□ 1.7
TNFRSF1B-202ENST00000489921 KLRG2A4D1S0 409 aaPredicted RBP25.64■■□□□ 1.7
TNFRSF1B-202ENST00000489921 STYK1Q6J9G0 422 aa25.64■■□□□ 1.7
TNFRSF1B-202ENST00000489921 NBPF5PQ86XG9 351 aaPredicted RBP25.64■■□□□ 1.7
TNFRSF1B-202ENST00000489921 RRAGCQ9HB90 399 aa25.64■■□□□ 1.7
TNFRSF1B-202ENST00000489921 RIPK4P57078 832 aa25.63■■□□□ 1.69
TNFRSF1B-202ENST00000489921 ZNF219Q9P2Y4 722 aaPredicted RBP25.63■■□□□ 1.69
TNFRSF1B-202ENST00000489921 NIP7Q9Y221 180 aaKnown RBP eCLIP25.63■■□□□ 1.69
TNFRSF1B-202ENST00000489921 MYBBP1AQ9BQG0 1328 aaKnown RBP25.63■■□□□ 1.69
TNFRSF1B-202ENST00000489921 RBM46Q8TBY0 533 aaKnown RBP25.62■■□□□ 1.69
TNFRSF1B-202ENST00000489921 MASTLQ96GX5 879 aa25.62■■□□□ 1.69
TNFRSF1B-202ENST00000489921 TMPOP42166 694 aaKnown RBP25.61■■□□□ 1.69
TNFRSF1B-202ENST00000489921 PRPF40BQ6NWY9 871 aaKnown RBP25.61■■□□□ 1.69
TNFRSF1B-202ENST00000489921 TTLL7Q6ZT98 887 aa25.61■■□□□ 1.69
TNFRSF1B-202ENST00000489921 C7orf43Q8WVR3 580 aa25.61■■□□□ 1.69
TNFRSF1B-202ENST00000489921 CNKSR1Q969H4 720 aa25.61■■□□□ 1.69
TNFRSF1B-202ENST00000489921 GLTPD2A6NH11 291 aa25.6■■□□□ 1.69
TNFRSF1B-202ENST00000489921 NPHP1O15259 732 aa25.6■■□□□ 1.69
TNFRSF1B-202ENST00000489921 TPTE2Q6XPS3 522 aa25.6■■□□□ 1.69
TNFRSF1B-202ENST00000489921 NGEFQ8N5V2 710 aa25.6■■□□□ 1.69
TNFRSF1B-202ENST00000489921 RRP7AQ9Y3A4 280 aaKnown RBP25.6■■□□□ 1.69
TNFRSF1B-202ENST00000489921 ERVV-1B6SEH8 477 aa25.59■■□□□ 1.69
TNFRSF1B-202ENST00000489921 FAM177BA6PVY3 158 aa25.58■■□□□ 1.69
TNFRSF1B-202ENST00000489921 LRP10Q7Z4F1 713 aa25.58■■□□□ 1.69
TNFRSF1B-202ENST00000489921 MAP3K15Q6ZN16 1313 aa25.58■■□□□ 1.69
TNFRSF1B-202ENST00000489921 LTBP3Q9NS15 1303 aa25.58■■□□□ 1.69
TNFRSF1B-202ENST00000489921 MYL6BP14649 208 aa25.57■■□□□ 1.68
TNFRSF1B-202ENST00000489921 TSPYL4Q9UJ04 414 aa25.57■■□□□ 1.68
TNFRSF1B-202ENST00000489921 PDIA6Q15084 440 aa25.56■■□□□ 1.68
TNFRSF1B-202ENST00000489921 CCDC146Q8IYE0 955 aa25.56■■□□□ 1.68
TNFRSF1B-202ENST00000489921 POTECB2RU33 542 aa25.55■■□□□ 1.68
TNFRSF1B-202ENST00000489921 NPR1P16066 1061 aa25.55■■□□□ 1.68
TNFRSF1B-202ENST00000489921 APLP1P51693 650 aa25.55■■□□□ 1.68
TNFRSF1B-202ENST00000489921 DNAJC5GQ8N7S2 189 aa25.55■■□□□ 1.68
TNFRSF1B-202ENST00000489921 BABAM1Q9NWV8 329 aa25.55■■□□□ 1.68
TNFRSF1B-202ENST00000489921 C16orf71Q8IYS4 520 aaPredicted RBP25.54■■□□□ 1.68
TNFRSF1B-202ENST00000489921 ERBB4Q15303 1308 aa25.54■■□□□ 1.68
TNFRSF1B-202ENST00000489921 WDR90Q96KV7 1748 aa25.54■■□□□ 1.68
TNFRSF1B-202ENST00000489921 FSTL1Q12841 308 aa25.53■■□□□ 1.68
TNFRSF1B-202ENST00000489921 TAOK3Q9H2K8 898 aa25.53■■□□□ 1.68
TNFRSF1B-202ENST00000489921 TRIM35Q9UPQ4 493 aa25.53■■□□□ 1.68
TNFRSF1B-202ENST00000489921 UBN2Q6ZU65 1347 aa25.53■■□□□ 1.68
TNFRSF1B-202ENST00000489921 ABCC12Q96J65 1359 aa25.53■■□□□ 1.68
TNFRSF1B-202ENST00000489921 ERFEQ4G0M1 354 aa25.52■■□□□ 1.68
TNFRSF1B-202ENST00000489921 OLFM4Q6UX06 510 aa25.52■■□□□ 1.68
TNFRSF1B-202ENST00000489921 NUTM1Q86Y26 1132 aa25.52■■□□□ 1.68
TNFRSF1B-202ENST00000489921 ZNF34Q8IZ26 560 aa25.52■■□□□ 1.68
TNFRSF1B-202ENST00000489921 ZBTB3Q9H5J0 574 aa25.52■■□□□ 1.68
TNFRSF1B-202ENST00000489921 ADAMTS8Q9UP79 889 aa25.52■■□□□ 1.68
TNFRSF1B-202ENST00000489921 VEGFAP15692 232 aaPredicted RBP25.51■■□□□ 1.67
TNFRSF1B-202ENST00000489921 PROSER3Q2NL68 480 aa25.51■■□□□ 1.67
TNFRSF1B-202ENST00000489921 KIF6Q6ZMV9 814 aa25.51■■□□□ 1.67
TNFRSF1B-202ENST00000489921 RUNDC1Q96C34 613 aa25.51■■□□□ 1.67
TNFRSF1B-202ENST00000489921 PCNTO95613 3336 aa25.5■■□□□ 1.67
TNFRSF1B-202ENST00000489921 LMOD3Q0VAK6 560 aa25.5■■□□□ 1.67
TNFRSF1B-202ENST00000489921 NEUROD2Q15784 382 aa25.5■■□□□ 1.67
TNFRSF1B-202ENST00000489921 CRY2Q49AN0 593 aa25.5■■□□□ 1.67
TNFRSF1B-202ENST00000489921 SOGA3Q5TF21 947 aa25.5■■□□□ 1.67
TNFRSF1B-202ENST00000489921 SUSD4Q5VX71 490 aa25.5■■□□□ 1.67
TNFRSF1B-202ENST00000489921 GIGYF2Q6Y7W6 1299 aaKnown RBP25.5■■□□□ 1.67
TNFRSF1B-202ENST00000489921 PRKRIP1Q9H875 184 aaPredicted RBP25.5■■□□□ 1.67
TNFRSF1B-202ENST00000489921 CHL1O00533 1208 aa25.49■■□□□ 1.67
TNFRSF1B-202ENST00000489921 EIF2S2P20042 333 aaKnown RBP25.49■■□□□ 1.67
TNFRSF1B-202ENST00000489921 GPTP24298 496 aa25.49■■□□□ 1.67
TNFRSF1B-202ENST00000489921 NYXQ9GZU5 481 aa25.49■■□□□ 1.67
TNFRSF1B-202ENST00000489921 ANXA1P04083 346 aa25.48■■□□□ 1.67
TNFRSF1B-202ENST00000489921 RIC1Q4ADV7 1423 aa25.47■■□□□ 1.67
TNFRSF1B-202ENST00000489921 SNED1Q8TER0 1413 aa25.47■■□□□ 1.67
TNFRSF1B-202ENST00000489921 IBTKQ9P2D0 1353 aaPredicted RBP25.47■■□□□ 1.67
TNFRSF1B-202ENST00000489921 GTF2E1P29083 439 aaPredicted RBP25.47■■□□□ 1.67
TNFRSF1B-202ENST00000489921 HTRA3P83110 453 aa25.47■■□□□ 1.67
TNFRSF1B-202ENST00000489921 KRT24Q2M2I5 525 aa25.47■■□□□ 1.67
TNFRSF1B-202ENST00000489921 CCDC93Q567U6 631 aa25.47■■□□□ 1.67
TNFRSF1B-202ENST00000489921 NTSR2O95665 410 aa25.46■■□□□ 1.67
TNFRSF1B-202ENST00000489921 ALDH1B1P30837 517 aa25.46■■□□□ 1.67
TNFRSF1B-202ENST00000489921 DPY19L2Q6NUT2 758 aa25.46■■□□□ 1.67
TNFRSF1B-202ENST00000489921 WDR43Q15061 677 aaKnown RBP eCLIP25.45■■□□□ 1.66
TNFRSF1B-202ENST00000489921 SMC1BQ8NDV3 1235 aa25.45■■□□□ 1.66
TNFRSF1B-202ENST00000489921 DDNO94850 711 aaPredicted RBP25.44■■□□□ 1.66
TNFRSF1B-202ENST00000489921 FKBP4Q02790 459 aaKnown RBP eCLIP25.44■■□□□ 1.66
TNFRSF1B-202ENST00000489921 NECTIN2Q92692 538 aa25.44■■□□□ 1.66
TNFRSF1B-202ENST00000489921 ANKRD36CQ5JPF3 1778 aa25.44■■□□□ 1.66
TNFRSF1B-202ENST00000489921 HOXA10P31260 410 aaPredicted RBP25.43■■□□□ 1.66
TNFRSF1B-202ENST00000489921 C3orf67Q6ZVT6 689 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms