RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 DZIP3Q86Y13 1208 aaKnown RBP17.4■□□□□ 0.38
LTA-216ENST00000489638 CNKSR1Q969H4 720 aa17.4■□□□□ 0.38
LTA-216ENST00000489638 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
LTA-216ENST00000489638 ST5P78524 1137 aa17.4■□□□□ 0.38
LTA-216ENST00000489638 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
LTA-216ENST00000489638 USP16Q9Y5T5 823 aa17.4■□□□□ 0.38
LTA-216ENST00000489638 CACNA1SQ13698 1873 aa17.39■□□□□ 0.37
LTA-216ENST00000489638 PRAMEF22A3QJZ6 481 aa17.39■□□□□ 0.37
LTA-216ENST00000489638 NPHP1O15259 732 aa17.39■□□□□ 0.37
LTA-216ENST00000489638 HSPA1AP0DMV8 641 aaKnown RBP17.39■□□□□ 0.37
LTA-216ENST00000489638 HSPA1BP0DMV9 641 aaKnown RBP17.39■□□□□ 0.37
LTA-216ENST00000489638 MASTLQ96GX5 879 aa17.39■□□□□ 0.37
LTA-216ENST00000489638 TNS4Q8IZW8 715 aa17.38■□□□□ 0.37
LTA-216ENST00000489638 PCNTO95613 3336 aa17.38■□□□□ 0.37
LTA-216ENST00000489638 DDNO94850 711 aaPredicted RBP17.37■□□□□ 0.37
LTA-216ENST00000489638 POTEIP0CG38 1075 aa17.37■□□□□ 0.37
LTA-216ENST00000489638 POTEJP0CG39 1038 aa17.37■□□□□ 0.37
LTA-216ENST00000489638 SOGA3Q5TF21 947 aa17.37■□□□□ 0.37
LTA-216ENST00000489638 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
LTA-216ENST00000489638 CLEC4GQ6UXB4 293 aa17.37■□□□□ 0.37
LTA-216ENST00000489638 C7orf43Q8WVR3 580 aa17.37■□□□□ 0.37
LTA-216ENST00000489638 MCM10Q7L590 875 aa17.36■□□□□ 0.37
LTA-216ENST00000489638 NBPF5PQ86XG9 351 aaPredicted RBP17.36■□□□□ 0.37
LTA-216ENST00000489638 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
LTA-216ENST00000489638 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
LTA-216ENST00000489638 NBPF26B4DH59 902 aa17.34■□□□□ 0.37
LTA-216ENST00000489638 CAPN15O75808 1086 aa17.34■□□□□ 0.37
LTA-216ENST00000489638 NBPF10Q6P3W6 841 aaKnown RBP17.34■□□□□ 0.37
LTA-216ENST00000489638 NBPF15Q8N660 670 aa17.34■□□□□ 0.37
LTA-216ENST00000489638 CREBZFQ9NS37 354 aa17.34■□□□□ 0.37
LTA-216ENST00000489638 ZNF652Q9Y2D9 606 aa17.34■□□□□ 0.37
LTA-216ENST00000489638 KLRG2A4D1S0 409 aaPredicted RBP17.33■□□□□ 0.36
LTA-216ENST00000489638 RGL2O15211 777 aa17.33■□□□□ 0.36
LTA-216ENST00000489638 NPR1P16066 1061 aa17.33■□□□□ 0.36
LTA-216ENST00000489638 CCDC93Q567U6 631 aa17.33■□□□□ 0.36
LTA-216ENST00000489638 RTF1Q92541 710 aaKnown RBP17.33■□□□□ 0.36
LTA-216ENST00000489638 L3MBTL3Q96JM7 780 aaPredicted RBP17.33■□□□□ 0.36
LTA-216ENST00000489638 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
LTA-216ENST00000489638 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
LTA-216ENST00000489638 DCTN1Q14203 1278 aa17.32■□□□□ 0.36
LTA-216ENST00000489638 NIP7Q9Y221 180 aaKnown RBP eCLIP17.32■□□□□ 0.36
LTA-216ENST00000489638 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
LTA-216ENST00000489638 IQCA1LA6NCM1 817 aa17.31■□□□□ 0.36
LTA-216ENST00000489638 PPP2R1AP30153 589 aa17.31■□□□□ 0.36
LTA-216ENST00000489638 MKRN1Q9UHC7 482 aaKnown RBP17.31■□□□□ 0.36
LTA-216ENST00000489638 PASKQ96RG2 1323 aa17.31■□□□□ 0.36
LTA-216ENST00000489638 ZNF541Q9H0D2 1346 aa17.31■□□□□ 0.36
LTA-216ENST00000489638 SCN4AP35499 1836 aa17.31■□□□□ 0.36
LTA-216ENST00000489638 LAMB4A4D0S4 1761 aa17.3■□□□□ 0.36
LTA-216ENST00000489638 FKBP4Q02790 459 aaKnown RBP eCLIP17.3■□□□□ 0.36
LTA-216ENST00000489638 OLFM4Q6UX06 510 aa17.3■□□□□ 0.36
LTA-216ENST00000489638 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
LTA-216ENST00000489638 LDHDQ86WU2 507 aa17.3■□□□□ 0.36
LTA-216ENST00000489638 TAF1DQ9H5J8 278 aaPredicted RBP17.3■□□□□ 0.36
LTA-216ENST00000489638 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
LTA-216ENST00000489638 CNTNAP1P78357 1384 aa17.29■□□□□ 0.36
LTA-216ENST00000489638 SNED1Q8TER0 1413 aa17.29■□□□□ 0.36
LTA-216ENST00000489638 ADAMTSL1Q8N6G6 1762 aa17.28■□□□□ 0.36
LTA-216ENST00000489638 HTATSF1O43719 755 aaKnown RBP17.28■□□□□ 0.36
LTA-216ENST00000489638 HLFQ16534 295 aa17.28■□□□□ 0.36
LTA-216ENST00000489638 FAM177BA6PVY3 158 aa17.28■□□□□ 0.36
LTA-216ENST00000489638 ABCC12Q96J65 1359 aa17.27■□□□□ 0.36
LTA-216ENST00000489638 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.35
LTA-216ENST00000489638 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.35
LTA-216ENST00000489638 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
LTA-216ENST00000489638 CRY2Q49AN0 593 aa17.26■□□□□ 0.35
LTA-216ENST00000489638 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
LTA-216ENST00000489638 HACL1Q9UJ83 578 aa17.26■□□□□ 0.35
LTA-216ENST00000489638 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
LTA-216ENST00000489638 FZD9O00144 591 aa17.25■□□□□ 0.35
LTA-216ENST00000489638 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
LTA-216ENST00000489638 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
LTA-216ENST00000489638 ALDH1B1P30837 517 aa17.24■□□□□ 0.35
LTA-216ENST00000489638 EPHX2P34913 555 aa17.24■□□□□ 0.35
LTA-216ENST00000489638 EAPPQ56P03 285 aaPredicted RBP17.24■□□□□ 0.35
LTA-216ENST00000489638 COL4A5P29400 1685 aa17.24■□□□□ 0.35
LTA-216ENST00000489638 TMEM88BA6NKF7 163 aa17.23■□□□□ 0.35
LTA-216ENST00000489638 FOXN1O15353 648 aa17.23■□□□□ 0.35
LTA-216ENST00000489638 GTF2E1P29083 439 aaPredicted RBP17.23■□□□□ 0.35
LTA-216ENST00000489638 NUTM1Q86Y26 1132 aa17.23■□□□□ 0.35
LTA-216ENST00000489638 SYNE4Q8N205 404 aa17.23■□□□□ 0.35
LTA-216ENST00000489638 PSMD1Q99460 953 aa17.23■□□□□ 0.35
LTA-216ENST00000489638 RIC1Q4ADV7 1423 aa17.22■□□□□ 0.35
LTA-216ENST00000489638 MAP3K15Q6ZN16 1313 aa17.22■□□□□ 0.35
LTA-216ENST00000489638 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
LTA-216ENST00000489638 VEGFBP49765 207 aa17.22■□□□□ 0.35
LTA-216ENST00000489638 DLG5Q8TDM6 1919 aa17.22■□□□□ 0.35
LTA-216ENST00000489638 IBTKQ9P2D0 1353 aaPredicted RBP17.21■□□□□ 0.35
LTA-216ENST00000489638 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.35
LTA-216ENST00000489638 PNMA8AQ86V59 439 aaPredicted RBP17.21■□□□□ 0.35
LTA-216ENST00000489638 GPC2Q8N158 579 aa17.21■□□□□ 0.35
LTA-216ENST00000489638 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
LTA-216ENST00000489638 NYXQ9GZU5 481 aa17.21■□□□□ 0.35
LTA-216ENST00000489638 NUP98P52948 1817 aa17.21■□□□□ 0.34
LTA-216ENST00000489638 MAP1SQ66K74 1059 aaPredicted RBP17.2■□□□□ 0.34
LTA-216ENST00000489638 TTLL7Q6ZT98 887 aa17.2■□□□□ 0.34
LTA-216ENST00000489638 PNISRQ8TF01 805 aaKnown RBP17.2■□□□□ 0.34
LTA-216ENST00000489638 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
LTA-216ENST00000489638 LTBP1Q14766 1721 aa17.2■□□□□ 0.34
LTA-216ENST00000489638 HOXA10P31260 410 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms