RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
COL9A1-208ENST00000489611 RILPL2Q969X0 211 aa18.23■□□□□ 0.51
COL9A1-208ENST00000489611 CNTROBQ8N137 903 aa18.22■□□□□ 0.51
COL9A1-208ENST00000489611 GPATCH3Q96I76 525 aa18.22■□□□□ 0.51
COL9A1-208ENST00000489611 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
COL9A1-208ENST00000489611 CYP27B1O15528 508 aa18.21■□□□□ 0.51
COL9A1-208ENST00000489611 NEXNQ0ZGT2 675 aa18.21■□□□□ 0.51
COL9A1-208ENST00000489611 CLASRPQ8N2M8 674 aaKnown RBP18.21■□□□□ 0.51
COL9A1-208ENST00000489611 GRM8O00222 908 aa18.21■□□□□ 0.51
COL9A1-208ENST00000489611 GLRX3O76003 335 aaKnown RBP18.21■□□□□ 0.51
COL9A1-208ENST00000489611 IL2RBP14784 551 aa18.21■□□□□ 0.51
COL9A1-208ENST00000489611 C5P01031 1676 aa18.2■□□□□ 0.5
COL9A1-208ENST00000489611 TTC5Q8N0Z6 440 aa18.19■□□□□ 0.5
COL9A1-208ENST00000489611 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
COL9A1-208ENST00000489611 IL1RAPL2Q9NP60 686 aa18.19■□□□□ 0.5
COL9A1-208ENST00000489611 JCADQ9P266 1359 aa18.19■□□□□ 0.5
COL9A1-208ENST00000489611 SNRPA1P09661 255 aaKnown RBP18.19■□□□□ 0.5
COL9A1-208ENST00000489611 OS9Q13438 667 aaPredicted RBP18.19■□□□□ 0.5
COL9A1-208ENST00000489611 ANXA1P04083 346 aa18.18■□□□□ 0.5
COL9A1-208ENST00000489611 PDIA6Q15084 440 aa18.18■□□□□ 0.5
COL9A1-208ENST00000489611 ZCRB1Q8TBF4 217 aaKnown RBP18.18■□□□□ 0.5
COL9A1-208ENST00000489611 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
COL9A1-208ENST00000489611 ANO2Q9NQ90 1003 aa18.18■□□□□ 0.5
COL9A1-208ENST00000489611 PROSER3Q2NL68 480 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 RUFY2Q8WXA3 655 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 LAMB4A4D0S4 1761 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 ERBB4Q15303 1308 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 GOLGA6L3A6NEY3 463 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 HSPA1LP34931 641 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 RIC3Q7Z5B4 369 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 NUTM1Q86Y26 1132 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 COL15A1P39059 1388 aa18.17■□□□□ 0.5
COL9A1-208ENST00000489611 TSHZ3Q63HK5 1081 aa18.16■□□□□ 0.5
COL9A1-208ENST00000489611 INTS4Q96HW7 963 aaKnown RBP18.16■□□□□ 0.5
COL9A1-208ENST00000489611 FSD2A1L4K1 749 aa18.15■□□□□ 0.5
COL9A1-208ENST00000489611 NEK4P51957 841 aa18.15■□□□□ 0.5
COL9A1-208ENST00000489611 ECHDC1Q9NTX5 307 aa18.15■□□□□ 0.5
COL9A1-208ENST00000489611 CYP2E1P05181 493 aaPredicted RBP18.15■□□□□ 0.5
COL9A1-208ENST00000489611 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
COL9A1-208ENST00000489611 METTL22Q9BUU2 404 aaPredicted RBP18.15■□□□□ 0.5
COL9A1-208ENST00000489611 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
COL9A1-208ENST00000489611 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
COL9A1-208ENST00000489611 HIP1O00291 1037 aa18.14■□□□□ 0.49
COL9A1-208ENST00000489611 SGSM2O43147 1006 aa18.14■□□□□ 0.49
COL9A1-208ENST00000489611 IFIT2P09913 472 aaKnown RBP18.14■□□□□ 0.49
COL9A1-208ENST00000489611 HSPA4P34932 840 aa18.14■□□□□ 0.49
COL9A1-208ENST00000489611 PLCH1Q4KWH8 1693 aa18.13■□□□□ 0.49
COL9A1-208ENST00000489611 CWF19L2Q2TBE0 894 aaKnown RBP18.13■□□□□ 0.49
COL9A1-208ENST00000489611 KIAA1211Q6ZU35 1233 aa18.13■□□□□ 0.49
COL9A1-208ENST00000489611 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
COL9A1-208ENST00000489611 RAD50Q92878 1312 aa18.13■□□□□ 0.49
COL9A1-208ENST00000489611 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
COL9A1-208ENST00000489611 CABP4P57796 275 aa18.13■□□□□ 0.49
COL9A1-208ENST00000489611 G3BP1Q13283 466 aaKnown RBP eCLIP18.13■□□□□ 0.49
COL9A1-208ENST00000489611 UNC5CLQ8IV45 518 aa18.13■□□□□ 0.49
COL9A1-208ENST00000489611 ZNF496Q96IT1 587 aaPredicted RBP18.13■□□□□ 0.49
COL9A1-208ENST00000489611 NEURL1BA8MQ27 555 aa18.12■□□□□ 0.49
COL9A1-208ENST00000489611 CUL4AQ13619 759 aa18.12■□□□□ 0.49
COL9A1-208ENST00000489611 GCKRQ14397 625 aa18.12■□□□□ 0.49
COL9A1-208ENST00000489611 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
COL9A1-208ENST00000489611 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
COL9A1-208ENST00000489611 BAG4O95429 457 aaKnown RBP18.11■□□□□ 0.49
COL9A1-208ENST00000489611 MRE11P49959 708 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 EVI5LQ96CN4 794 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 SLIT2O94813 1529 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 ERVV-2B6SEH9 535 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 IGKV5-2P06315 115 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 SSFA2P28290 1259 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 AIMP1Q12904 312 aaKnown RBP18.11■□□□□ 0.49
COL9A1-208ENST00000489611 XAGE3Q8WTP9 111 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 SUCLG2Q96I99 432 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
COL9A1-208ENST00000489611 DISP2A7MBM2 1401 aa18.1■□□□□ 0.49
COL9A1-208ENST00000489611 COPS6Q7L5N1 327 aa18.1■□□□□ 0.49
COL9A1-208ENST00000489611 TMX3Q96JJ7 454 aa18.1■□□□□ 0.49
COL9A1-208ENST00000489611 BICC1Q9H694 974 aaKnown RBP18.1■□□□□ 0.49
COL9A1-208ENST00000489611 SPATA31A1Q5TZJ5 1347 aa18.1■□□□□ 0.49
COL9A1-208ENST00000489611 LRP6O75581 1613 aa18.1■□□□□ 0.49
COL9A1-208ENST00000489611 KLHL40Q2TBA0 621 aa18.1■□□□□ 0.49
COL9A1-208ENST00000489611 DIAPH3Q9NSV4 1193 aa18.1■□□□□ 0.49
COL9A1-208ENST00000489611 CCDC9Q9Y3X0 531 aaKnown RBP18.1■□□□□ 0.49
COL9A1-208ENST00000489611 SPATA31A6Q5VVP1 1343 aa18.09■□□□□ 0.49
COL9A1-208ENST00000489611 ARFGEF2Q9Y6D5 1785 aa18.09■□□□□ 0.49
COL9A1-208ENST00000489611 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
COL9A1-208ENST00000489611 UBR2Q8IWV8 1755 aa18.09■□□□□ 0.49
COL9A1-208ENST00000489611 LRP10Q7Z4F1 713 aa18.09■□□□□ 0.49
COL9A1-208ENST00000489611 KAZALD1Q96I82 304 aa18.09■□□□□ 0.49
COL9A1-208ENST00000489611 AFDNP55196 1824 aaKnown RBP18.09■□□□□ 0.49
COL9A1-208ENST00000489611 MYL6BP14649 208 aa18.08■□□□□ 0.49
COL9A1-208ENST00000489611 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.49
COL9A1-208ENST00000489611 PLBD2Q8NHP8 589 aa18.08■□□□□ 0.49
COL9A1-208ENST00000489611 COPRSQ9NQ92 184 aa18.08■□□□□ 0.48
COL9A1-208ENST00000489611 SPATA31A5Q5VU36 1347 aa18.07■□□□□ 0.48
COL9A1-208ENST00000489611 SPATA31A7Q8IWB4 1347 aa18.07■□□□□ 0.48
COL9A1-208ENST00000489611 AACSQ86V21 672 aa18.07■□□□□ 0.48
COL9A1-208ENST00000489611 LSG1Q9H089 658 aaKnown RBP18.07■□□□□ 0.48
COL9A1-208ENST00000489611 PALD1Q9ULE6 856 aa18.07■□□□□ 0.48
COL9A1-208ENST00000489611 PAPPAQ13219 1627 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms