RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 HOXB7P09629 217 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 DDR1Q08345 913 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 HDGFL1Q5TGJ6 251 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 POTEHQ6S545 545 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 TTLL7Q6ZT98 887 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 FHDC1Q9C0D6 1143 aaPredicted RBP10.19□□□□□ -0.78
SSR1-210ENST00000489567 CHPF2Q9P2E5 772 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
SSR1-210ENST00000489567 SCN7AQ01118 1682 aa10.18□□□□□ -0.78
SSR1-210ENST00000489567 A0A087WZG4 1122 aa10.18□□□□□ -0.78
SSR1-210ENST00000489567 TM4SF1P30408 202 aa10.18□□□□□ -0.78
SSR1-210ENST00000489567 NFIXQ14938 502 aa10.18□□□□□ -0.78
SSR1-210ENST00000489567 CDCA7LQ96GN5 454 aa10.18□□□□□ -0.78
SSR1-210ENST00000489567 EXOSC9Q06265 439 aaKnown RBP10.17□□□□□ -0.78
SSR1-210ENST00000489567 HLFQ16534 295 aa10.17□□□□□ -0.78
SSR1-210ENST00000489567 TBC1D9BQ66K14 1250 aa10.17□□□□□ -0.78
SSR1-210ENST00000489567 DDX21Q9NR30 783 aaKnown RBP eCLIP10.17□□□□□ -0.78
SSR1-210ENST00000489567 U3KPZ7 1027 aaPredicted RBP10.17□□□□□ -0.78
SSR1-210ENST00000489567 BCORQ6W2J9 1755 aa10.17□□□□□ -0.78
SSR1-210ENST00000489567 TCERG1O14776 1098 aaKnown RBP10.17□□□□□ -0.78
SSR1-210ENST00000489567 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
SSR1-210ENST00000489567 GOLGA2Q08379 1002 aa10.17□□□□□ -0.78
SSR1-210ENST00000489567 TWISTNBQ3B726 338 aaPredicted RBP10.17□□□□□ -0.78
SSR1-210ENST00000489567 BICDL1Q6ZP65 573 aa10.17□□□□□ -0.78
SSR1-210ENST00000489567 NPM2Q86SE8 214 aaKnown RBP10.17□□□□□ -0.78
SSR1-210ENST00000489567 SYT17Q9BSW7 474 aa10.17□□□□□ -0.78
SSR1-210ENST00000489567 POLRMTO00411 1230 aaKnown RBP10.16□□□□□ -0.78
SSR1-210ENST00000489567 COPS6Q7L5N1 327 aa10.16□□□□□ -0.78
SSR1-210ENST00000489567 KLHL34Q8N239 644 aa10.16□□□□□ -0.78
SSR1-210ENST00000489567 XAGE3Q8WTP9 111 aa10.16□□□□□ -0.78
SSR1-210ENST00000489567 ZBTB3Q9H5J0 574 aa10.16□□□□□ -0.78
SSR1-210ENST00000489567 VAMP4O75379 141 aa10.15□□□□□ -0.78
SSR1-210ENST00000489567 HNRNPUQ00839 825 aaKnown RBP eCLIP10.15□□□□□ -0.78
SSR1-210ENST00000489567 SLFN5Q08AF3 891 aa10.15□□□□□ -0.78
SSR1-210ENST00000489567 AIMP1Q12904 312 aaKnown RBP10.15□□□□□ -0.78
SSR1-210ENST00000489567 NLGN2Q8NFZ4 835 aa10.15□□□□□ -0.78
SSR1-210ENST00000489567 MYH16Q9H6N6 1097 aa10.15□□□□□ -0.78
SSR1-210ENST00000489567 FOXD4L1Q9NU39 408 aa10.15□□□□□ -0.78
SSR1-210ENST00000489567 DBF4Q9UBU7 674 aaPredicted RBP10.15□□□□□ -0.78
SSR1-210ENST00000489567 MAP3K15Q6ZN16 1313 aa10.15□□□□□ -0.78
SSR1-210ENST00000489567 PHAXQ9H814 394 aaKnown RBP10.15□□□□□ -0.79
SSR1-210ENST00000489567 PARP3Q9Y6F1 533 aa10.15□□□□□ -0.79
SSR1-210ENST00000489567 GOLGB1Q14789 3259 aaKnown RBP10.14□□□□□ -0.79
SSR1-210ENST00000489567 ERVV-1B6SEH8 477 aa10.14□□□□□ -0.79
SSR1-210ENST00000489567 E9PSI1 815 aa10.14□□□□□ -0.79
SSR1-210ENST00000489567 CLEC4GQ6UXB4 293 aa10.14□□□□□ -0.79
SSR1-210ENST00000489567 KIF6Q6ZMV9 814 aa10.14□□□□□ -0.79
SSR1-210ENST00000489567 TRMT2AQ8IZ69 625 aaKnown RBP10.14□□□□□ -0.79
SSR1-210ENST00000489567 SERPINB2P05120 415 aa10.13□□□□□ -0.79
SSR1-210ENST00000489567 CCDC30Q5VVM6 783 aa10.13□□□□□ -0.79
SSR1-210ENST00000489567 C10orf71Q711Q0 1435 aa10.13□□□□□ -0.79
SSR1-210ENST00000489567 CARMIL3Q8ND23 1372 aa10.13□□□□□ -0.79
SSR1-210ENST00000489567 CCDC24Q8N4L8 307 aa10.13□□□□□ -0.79
SSR1-210ENST00000489567 SETDB2Q96T68 719 aa10.13□□□□□ -0.79
SSR1-210ENST00000489567 HYPKQ9NX55 129 aa10.13□□□□□ -0.79
SSR1-210ENST00000489567 NIP7Q9Y221 180 aaKnown RBP eCLIP10.13□□□□□ -0.79
SSR1-210ENST00000489567 ZNF652Q9Y2D9 606 aa10.13□□□□□ -0.79
SSR1-210ENST00000489567 CD2APQ9Y5K6 639 aa10.13□□□□□ -0.79
SSR1-210ENST00000489567 AFDNP55196 1824 aaKnown RBP10.12□□□□□ -0.79
SSR1-210ENST00000489567 UBN2Q6ZU65 1347 aa10.12□□□□□ -0.79
SSR1-210ENST00000489567 NRXN2Q9P2S2 1712 aa10.12□□□□□ -0.79
SSR1-210ENST00000489567 RGL2O15211 777 aa10.12□□□□□ -0.79
SSR1-210ENST00000489567 GPTP24298 496 aa10.12□□□□□ -0.79
SSR1-210ENST00000489567 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
SSR1-210ENST00000489567 G2E3Q7L622 706 aa10.12□□□□□ -0.79
SSR1-210ENST00000489567 UTRNP46939 3433 aa10.12□□□□□ -0.79
SSR1-210ENST00000489567 NUP98P52948 1817 aa10.11□□□□□ -0.79
SSR1-210ENST00000489567 ATP10DQ9P241 1426 aa10.11□□□□□ -0.79
SSR1-210ENST00000489567 ZNF34Q8IZ26 560 aa10.11□□□□□ -0.79
SSR1-210ENST00000489567 ZNF428Q96B54 188 aa10.11□□□□□ -0.79
SSR1-210ENST00000489567 KIAA1551Q9HCM1 1747 aa10.11□□□□□ -0.79
SSR1-210ENST00000489567 FAM177BA6PVY3 158 aa10.1□□□□□ -0.79
SSR1-210ENST00000489567 PRR5LQ6MZQ0 368 aa10.1□□□□□ -0.79
SSR1-210ENST00000489567 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
SSR1-210ENST00000489567 PLBD2Q8NHP8 589 aa10.1□□□□□ -0.79
SSR1-210ENST00000489567 WWC3Q9ULE0 1092 aa10.1□□□□□ -0.79
SSR1-210ENST00000489567 KIF13BQ9NQT8 1826 aa10.1□□□□□ -0.79
SSR1-210ENST00000489567 PXDNLA1KZ92 1463 aa10.1□□□□□ -0.79
SSR1-210ENST00000489567 A0A0G2JLW4 131 aa10.1□□□□□ -0.79
SSR1-210ENST00000489567 STK31Q9BXU1 1019 aa10.1□□□□□ -0.79
SSR1-210ENST00000489567 DPEP1P16444 411 aa10.09□□□□□ -0.79
SSR1-210ENST00000489567 KCNA3P22001 575 aa10.09□□□□□ -0.79
SSR1-210ENST00000489567 CHRNA5P30532 468 aa10.09□□□□□ -0.79
SSR1-210ENST00000489567 TCIRG1Q13488 830 aa10.09□□□□□ -0.79
SSR1-210ENST00000489567 SUSD4Q5VX71 490 aa10.09□□□□□ -0.79
SSR1-210ENST00000489567 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
SSR1-210ENST00000489567 CNBD1Q8NA66 436 aa10.09□□□□□ -0.79
SSR1-210ENST00000489567 N4BP2Q86UW6 1770 aaPredicted RBP10.09□□□□□ -0.79
SSR1-210ENST00000489567 ATP5J2-PTCD1G3V325 749 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 NUTM1Q86Y26 1132 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 CHMP4AQ9BY43 222 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 ZBED9Q6R2W3 1325 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 ADCY9O60503 1353 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 ARFGEF2Q9Y6D5 1785 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 ANKRD31Q8N7Z5 1873 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 TGFB2P61812 414 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 FLIIQ13045 1269 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 RIC3Q7Z5B4 369 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 NLRP10Q86W26 655 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 SYNE4Q8N205 404 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms