RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 TRPM2O94759 1503 aa11.11□□□□□ -0.63
SMC6-209ENST00000489535 TRIM66O15016 1216 aa11.11□□□□□ -0.63
SMC6-209ENST00000489535 ZNF784Q8NCA9 323 aaPredicted RBP11.11□□□□□ -0.63
SMC6-209ENST00000489535 IFT172Q9UG01 1749 aa11.11□□□□□ -0.63
SMC6-209ENST00000489535 ABCC3O15438 1527 aa11.1□□□□□ -0.63
SMC6-209ENST00000489535 GPR25O00155 361 aa11.1□□□□□ -0.63
SMC6-209ENST00000489535 LILRA1O75019 489 aa11.1□□□□□ -0.63
SMC6-209ENST00000489535 ADD1P35611 737 aaKnown RBP11.1□□□□□ -0.63
SMC6-209ENST00000489535 ZBTB33Q86T24 672 aa11.1□□□□□ -0.63
SMC6-209ENST00000489535 NEDD1Q8NHV4 660 aa11.1□□□□□ -0.63
SMC6-209ENST00000489535 ZC3H15Q8WU90 426 aaKnown RBP11.1□□□□□ -0.63
SMC6-209ENST00000489535 ACDQ96AP0 544 aa11.1□□□□□ -0.63
SMC6-209ENST00000489535 FKBPLQ9UIM3 349 aa11.1□□□□□ -0.63
SMC6-209ENST00000489535 AGLP35573 1532 aa11.09□□□□□ -0.63
SMC6-209ENST00000489535 POLR1AO95602 1720 aaPredicted RBP11.09□□□□□ -0.63
SMC6-209ENST00000489535 PTGIRP43119 386 aa11.09□□□□□ -0.63
SMC6-209ENST00000489535 TRIM22Q8IYM9 498 aa11.09□□□□□ -0.63
SMC6-209ENST00000489535 Q8N3U1 123 aa11.09□□□□□ -0.63
SMC6-209ENST00000489535 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
SMC6-209ENST00000489535 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
SMC6-209ENST00000489535 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
SMC6-209ENST00000489535 CCDC144AA2RUR9 1427 aa11.08□□□□□ -0.64
SMC6-209ENST00000489535 PLA2R1Q13018 1463 aa11.07□□□□□ -0.64
SMC6-209ENST00000489535 FER1L4A9Z1Z3 1794 aa11.07□□□□□ -0.64
SMC6-209ENST00000489535 PPLO60437 1756 aa11.06□□□□□ -0.64
SMC6-209ENST00000489535 RHOQP17081 205 aa11.06□□□□□ -0.64
SMC6-209ENST00000489535 DBN1Q16643 649 aa11.06□□□□□ -0.64
SMC6-209ENST00000489535 GGT6Q6P531 493 aa11.06□□□□□ -0.64
SMC6-209ENST00000489535 TRPM1Q7Z4N2 1603 aa11.06□□□□□ -0.64
SMC6-209ENST00000489535 BAG6P46379 1132 aa11.05□□□□□ -0.64
SMC6-209ENST00000489535 PRICKLE2Q7Z3G6 844 aa11.05□□□□□ -0.64
SMC6-209ENST00000489535 LRRC4BQ9NT99 713 aa11.05□□□□□ -0.64
SMC6-209ENST00000489535 PIK3C2BO00750 1634 aa11.05□□□□□ -0.64
SMC6-209ENST00000489535 ZC3H4Q9UPT8 1303 aaKnown RBP11.05□□□□□ -0.64
SMC6-209ENST00000489535 UGGT1Q9NYU2 1555 aa11.04□□□□□ -0.64
SMC6-209ENST00000489535 PTPRTO14522 1441 aa11.04□□□□□ -0.64
SMC6-209ENST00000489535 RNF144AP50876 292 aaPredicted RBP11.04□□□□□ -0.64
SMC6-209ENST00000489535 LRRN4Q8WUT4 740 aa11.04□□□□□ -0.64
SMC6-209ENST00000489535 L3MBTL2Q969R5 705 aa11.04□□□□□ -0.64
SMC6-209ENST00000489535 SYNMO15061 1565 aa11.03□□□□□ -0.64
SMC6-209ENST00000489535 KRBA1A5PL33 1030 aa11.03□□□□□ -0.64
SMC6-209ENST00000489535 ERVH48-1M5A8F1 160 aa11.03□□□□□ -0.64
SMC6-209ENST00000489535 CLK2P49760 499 aaKnown RBP11.03□□□□□ -0.64
SMC6-209ENST00000489535 NBPF20Q3BBV1 942 aa11.03□□□□□ -0.64
SMC6-209ENST00000489535 FOXR1Q6PIV2 292 aa11.03□□□□□ -0.64
SMC6-209ENST00000489535 ADAM32Q8TC27 787 aa11.03□□□□□ -0.64
SMC6-209ENST00000489535 NEURL4Q96JN8 1562 aa11.03□□□□□ -0.64
SMC6-209ENST00000489535 RAB15P59190 212 aa11.02□□□□□ -0.65
SMC6-209ENST00000489535 WASHC2CQ9Y4E1 1318 aa11.02□□□□□ -0.65
SMC6-209ENST00000489535 NPATQ14207 1427 aa11.01□□□□□ -0.65
SMC6-209ENST00000489535 PTK2Q05397 1052 aa11.01□□□□□ -0.65
SMC6-209ENST00000489535 GTPBP3Q969Y2 492 aaKnown RBP11.01□□□□□ -0.65
SMC6-209ENST00000489535 GPSM3Q9Y4H4 160 aa11.01□□□□□ -0.65
SMC6-209ENST00000489535 MADDQ8WXG6 1647 aa11.01□□□□□ -0.65
SMC6-209ENST00000489535 KIAA1210Q9ULL0 1709 aa11.01□□□□□ -0.65
SMC6-209ENST00000489535 OIP5O43482 229 aa11□□□□□ -0.65
SMC6-209ENST00000489535 SNRPNP63162 240 aaKnown RBP11□□□□□ -0.65
SMC6-209ENST00000489535 NR6A1Q15406 480 aa11□□□□□ -0.65
SMC6-209ENST00000489535 RIPOR1Q6ZS17 1223 aa11□□□□□ -0.65
SMC6-209ENST00000489535 C3P01024 1663 aa10.99□□□□□ -0.65
SMC6-209ENST00000489535 ARHGAP31Q2M1Z3 1444 aa10.99□□□□□ -0.65
SMC6-209ENST00000489535 CNTLNQ9NXG0 1405 aa10.99□□□□□ -0.65
SMC6-209ENST00000489535 ADGRB3O60242 1522 aa10.99□□□□□ -0.65
SMC6-209ENST00000489535 LAMC1P11047 1609 aa10.98□□□□□ -0.65
SMC6-209ENST00000489535 ESPNB1AK53 854 aa10.98□□□□□ -0.65
SMC6-209ENST00000489535 FURINP09958 794 aa10.98□□□□□ -0.65
SMC6-209ENST00000489535 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
SMC6-209ENST00000489535 AK7Q96M32 723 aa10.98□□□□□ -0.65
SMC6-209ENST00000489535 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
SMC6-209ENST00000489535 SPATA31E1Q6ZUB1 1445 aa10.98□□□□□ -0.65
SMC6-209ENST00000489535 LCE3BQ5TA77 95 aa10.97□□□□□ -0.65
SMC6-209ENST00000489535 DYRK1BQ9Y463 629 aa10.97□□□□□ -0.65
SMC6-209ENST00000489535 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
SMC6-209ENST00000489535 IQGAP1P46940 1657 aa10.96□□□□□ -0.65
SMC6-209ENST00000489535 RIMS1Q86UR5 1692 aaKnown RBP10.96□□□□□ -0.65
SMC6-209ENST00000489535 TMEM131LA2VDJ0 1609 aa10.96□□□□□ -0.65
SMC6-209ENST00000489535 NOS1P29475 1434 aa10.96□□□□□ -0.65
SMC6-209ENST00000489535 MX2P20592 715 aa10.96□□□□□ -0.65
SMC6-209ENST00000489535 MLECQ14165 292 aa10.96□□□□□ -0.65
SMC6-209ENST00000489535 NBPF8Q3BBV2 869 aa10.96□□□□□ -0.65
SMC6-209ENST00000489535 SPATA31D1Q6ZQQ2 1576 aa10.95□□□□□ -0.66
SMC6-209ENST00000489535 H7C1W4 665 aa10.95□□□□□ -0.66
SMC6-209ENST00000489535 COL8A1P27658 744 aa10.95□□□□□ -0.66
SMC6-209ENST00000489535 GPC1P35052 558 aa10.95□□□□□ -0.66
SMC6-209ENST00000489535 RGL3Q3MIN7 710 aa10.95□□□□□ -0.66
SMC6-209ENST00000489535 ZNF326Q5BKZ1 582 aaKnown RBP10.95□□□□□ -0.66
SMC6-209ENST00000489535 DCAF11Q8TEB1 546 aa10.95□□□□□ -0.66
SMC6-209ENST00000489535 TRERF1Q96PN7 1200 aa10.95□□□□□ -0.66
SMC6-209ENST00000489535 POLR3EQ9NVU0 708 aa10.95□□□□□ -0.66
SMC6-209ENST00000489535 ERVK-7P63135 1459 aa10.94□□□□□ -0.66
SMC6-209ENST00000489535 ARID4BQ4LE39 1312 aaPredicted RBP10.94□□□□□ -0.66
SMC6-209ENST00000489535 CYLDQ9NQC7 956 aa10.94□□□□□ -0.66
SMC6-209ENST00000489535 PRAG1Q86YV5 1406 aa10.93□□□□□ -0.66
SMC6-209ENST00000489535 KDM5AP29375 1690 aaKnown RBP10.93□□□□□ -0.66
SMC6-209ENST00000489535 SHISA8B8ZZ34 492 aa10.93□□□□□ -0.66
SMC6-209ENST00000489535 PDE4DQ08499 809 aa10.93□□□□□ -0.66
SMC6-209ENST00000489535 ALYREFQ86V81 257 aaKnown RBP10.93□□□□□ -0.66
SMC6-209ENST00000489535 GAS2L1Q99501 681 aaPredicted RBP10.93□□□□□ -0.66
SMC6-209ENST00000489535 NSFL1CQ9UNZ2 370 aaKnown RBP10.93□□□□□ -0.66
SMC6-209ENST00000489535 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms