RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 ZPR1O75312 459 aa18.15■□□□□ 0.5
CLDN11-209ENST00000489485 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
CLDN11-209ENST00000489485 BRPF1P55201 1214 aaPredicted RBP18.15■□□□□ 0.5
CLDN11-209ENST00000489485 RRP1P56182 461 aaKnown RBP18.15■□□□□ 0.5
CLDN11-209ENST00000489485 ANKRD13DQ6ZTN6 518 aa18.15■□□□□ 0.5
CLDN11-209ENST00000489485 COL23A1Q86Y22 540 aaPredicted RBP18.15■□□□□ 0.5
CLDN11-209ENST00000489485 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.49
CLDN11-209ENST00000489485 RIC3Q7Z5B4 369 aa18.14■□□□□ 0.49
CLDN11-209ENST00000489485 SRP68Q9UHB9 627 aaKnown RBP18.14■□□□□ 0.49
CLDN11-209ENST00000489485 NARFQ9UHQ1 456 aa18.14■□□□□ 0.49
CLDN11-209ENST00000489485 QSER1Q2KHR3 1735 aa18.13■□□□□ 0.49
CLDN11-209ENST00000489485 PTPRCP08575 1304 aa18.13■□□□□ 0.49
CLDN11-209ENST00000489485 PI4KAP2A4QPH2 592 aa18.13■□□□□ 0.49
CLDN11-209ENST00000489485 PI4KAP1Q8N8J0 262 aa18.13■□□□□ 0.49
CLDN11-209ENST00000489485 RNF123Q5XPI4 1314 aa18.13■□□□□ 0.49
CLDN11-209ENST00000489485 MAP3K15Q6ZN16 1313 aa18.13■□□□□ 0.49
CLDN11-209ENST00000489485 IPO8O15397 1037 aaKnown RBP18.12■□□□□ 0.49
CLDN11-209ENST00000489485 USPL1Q5W0Q7 1092 aa18.12■□□□□ 0.49
CLDN11-209ENST00000489485 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.12■□□□□ 0.49
CLDN11-209ENST00000489485 PLBD2Q8NHP8 589 aa18.12■□□□□ 0.49
CLDN11-209ENST00000489485 USP42Q9H9J4 1324 aaKnown RBP18.12■□□□□ 0.49
CLDN11-209ENST00000489485 F6X3S4 739 aa18.12■□□□□ 0.49
CLDN11-209ENST00000489485 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
CLDN11-209ENST00000489485 KSR2Q6VAB6 950 aa18.12■□□□□ 0.49
CLDN11-209ENST00000489485 MAP3K2Q9Y2U5 619 aa18.12■□□□□ 0.49
CLDN11-209ENST00000489485 PSDA5PKW4 1024 aaPredicted RBP18.11■□□□□ 0.49
CLDN11-209ENST00000489485 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
CLDN11-209ENST00000489485 ZKSCAN2Q63HK3 967 aa18.11■□□□□ 0.49
CLDN11-209ENST00000489485 PDGFDQ9GZP0 370 aaPredicted RBP18.11■□□□□ 0.49
CLDN11-209ENST00000489485 ARFGEF2Q9Y6D5 1785 aa18.11■□□□□ 0.49
CLDN11-209ENST00000489485 NUP98P52948 1817 aa18.1■□□□□ 0.49
CLDN11-209ENST00000489485 ERVV-1B6SEH8 477 aa18.1■□□□□ 0.49
CLDN11-209ENST00000489485 HLFQ16534 295 aa18.1■□□□□ 0.49
CLDN11-209ENST00000489485 ATF7IPQ6VMQ6 1270 aa18.1■□□□□ 0.49
CLDN11-209ENST00000489485 BCORQ6W2J9 1755 aa18.1■□□□□ 0.49
CLDN11-209ENST00000489485 ADCY9O60503 1353 aa18.1■□□□□ 0.49
CLDN11-209ENST00000489485 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
CLDN11-209ENST00000489485 ARHGAP45Q92619 1136 aa18.09■□□□□ 0.49
CLDN11-209ENST00000489485 CLUAP1Q96AJ1 413 aa18.09■□□□□ 0.49
CLDN11-209ENST00000489485 ZNF652Q9Y2D9 606 aa18.09■□□□□ 0.49
CLDN11-209ENST00000489485 SCN7AQ01118 1682 aa18.09■□□□□ 0.49
CLDN11-209ENST00000489485 GIGYF2Q6Y7W6 1299 aaKnown RBP18.09■□□□□ 0.49
CLDN11-209ENST00000489485 DNAAF4Q8WXU2 420 aa18.09■□□□□ 0.49
CLDN11-209ENST00000489485 API5Q9BZZ5 524 aaKnown RBP18.09■□□□□ 0.49
CLDN11-209ENST00000489485 GYS1P13807 737 aa18.08■□□□□ 0.49
CLDN11-209ENST00000489485 TRIM27P14373 513 aa18.08■□□□□ 0.49
CLDN11-209ENST00000489485 C20orf194Q5TEA3 1177 aa18.08■□□□□ 0.49
CLDN11-209ENST00000489485 TNNQ9UQP3 1299 aa18.08■□□□□ 0.49
CLDN11-209ENST00000489485 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
CLDN11-209ENST00000489485 BCL2L12Q9HB09 334 aa18.07■□□□□ 0.48
CLDN11-209ENST00000489485 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
CLDN11-209ENST00000489485 NEXNQ0ZGT2 675 aa18.07■□□□□ 0.48
CLDN11-209ENST00000489485 FKBP8Q14318 412 aa18.07■□□□□ 0.48
CLDN11-209ENST00000489485 BICDL1Q6ZP65 573 aa18.07■□□□□ 0.48
CLDN11-209ENST00000489485 FTSJ3Q8IY81 847 aaKnown RBP18.07■□□□□ 0.48
CLDN11-209ENST00000489485 MYD88Q99836 296 aa18.07■□□□□ 0.48
CLDN11-209ENST00000489485 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
CLDN11-209ENST00000489485 HSP90AB3PQ58FF7 597 aa18.06■□□□□ 0.48
CLDN11-209ENST00000489485 ATP5J2-PTCD1G3V325 749 aa18.05■□□□□ 0.48
CLDN11-209ENST00000489485 GPTP24298 496 aa18.05■□□□□ 0.48
CLDN11-209ENST00000489485 TCIRG1Q13488 830 aa18.05■□□□□ 0.48
CLDN11-209ENST00000489485 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
CLDN11-209ENST00000489485 ANKRD36CQ5JPF3 1778 aa18.05■□□□□ 0.48
CLDN11-209ENST00000489485 NEFLP07196 543 aa18.05■□□□□ 0.48
CLDN11-209ENST00000489485 TBC1D9BQ66K14 1250 aa18.05■□□□□ 0.48
CLDN11-209ENST00000489485 NLGN1Q8N2Q7 840 aa18.05■□□□□ 0.48
CLDN11-209ENST00000489485 PANK1Q8TE04 598 aa18.05■□□□□ 0.48
CLDN11-209ENST00000489485 NIP7Q9Y221 180 aaKnown RBP eCLIP18.05■□□□□ 0.48
CLDN11-209ENST00000489485 DZIP1LQ8IYY4 767 aaKnown RBP18.04■□□□□ 0.48
CLDN11-209ENST00000489485 SLC16A10Q8TF71 515 aa18.04■□□□□ 0.48
CLDN11-209ENST00000489485 RGL2O15211 777 aa18.03■□□□□ 0.48
CLDN11-209ENST00000489485 RLBP1P12271 317 aa18.03■□□□□ 0.48
CLDN11-209ENST00000489485 AFDNP55196 1824 aaKnown RBP18.03■□□□□ 0.48
CLDN11-209ENST00000489485 CWF19L2Q2TBE0 894 aaKnown RBP18.03■□□□□ 0.48
CLDN11-209ENST00000489485 SETDB2Q96T68 719 aa18.03■□□□□ 0.48
CLDN11-209ENST00000489485 CASZ1Q86V15 1759 aa18.03■□□□□ 0.48
CLDN11-209ENST00000489485 ZBTB7AO95365 584 aa18.03■□□□□ 0.48
CLDN11-209ENST00000489485 PDE3AQ14432 1141 aa18.03■□□□□ 0.48
CLDN11-209ENST00000489485 SRCIN1Q9C0H9 1055 aa18.03■□□□□ 0.48
CLDN11-209ENST00000489485 ATP10DQ9P241 1426 aa18.02■□□□□ 0.48
CLDN11-209ENST00000489485 ABCC4O15439 1325 aa18.02■□□□□ 0.48
CLDN11-209ENST00000489485 FAM177BA6PVY3 158 aa18.02■□□□□ 0.48
CLDN11-209ENST00000489485 MS4A1P11836 297 aa18.02■□□□□ 0.48
CLDN11-209ENST00000489485 BEND3Q5T5X7 828 aa18.02■□□□□ 0.48
CLDN11-209ENST00000489485 ZNF34Q8IZ26 560 aa18.02■□□□□ 0.48
CLDN11-209ENST00000489485 LINS1Q8NG48 757 aa18.02■□□□□ 0.48
CLDN11-209ENST00000489485 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
CLDN11-209ENST00000489485 NFIXQ14938 502 aa18.01■□□□□ 0.47
CLDN11-209ENST00000489485 CCT4P50991 539 aaKnown RBP18.01■□□□□ 0.47
CLDN11-209ENST00000489485 TMEM57Q8N5G2 664 aa18.01■□□□□ 0.47
CLDN11-209ENST00000489485 ISCA1Q9BUE6 129 aa18.01■□□□□ 0.47
CLDN11-209ENST00000489485 PXDNLA1KZ92 1463 aa18■□□□□ 0.47
CLDN11-209ENST00000489485 UBN2Q6ZU65 1347 aa18■□□□□ 0.47
CLDN11-209ENST00000489485 NEURL1BA8MQ27 555 aa18■□□□□ 0.47
CLDN11-209ENST00000489485 MTFR1LQ9H019 292 aa18■□□□□ 0.47
CLDN11-209ENST00000489485 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
CLDN11-209ENST00000489485 COG6Q9Y2V7 657 aa18■□□□□ 0.47
CLDN11-209ENST00000489485 MMP10P09238 476 aa17.99■□□□□ 0.47
CLDN11-209ENST00000489485 TM4SF1P30408 202 aa17.99■□□□□ 0.47
CLDN11-209ENST00000489485 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms