RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 PDIA6Q15084 440 aa19.94■□□□□ 0.78
SMIM11A-206ENST00000489469 DZIP3Q86Y13 1208 aaKnown RBP19.94■□□□□ 0.78
SMIM11A-206ENST00000489469 NECTIN2Q92692 538 aa19.94■□□□□ 0.78
SMIM11A-206ENST00000489469 STK31Q9BXU1 1019 aa19.94■□□□□ 0.78
SMIM11A-206ENST00000489469 HYPKQ9NX55 129 aa19.94■□□□□ 0.78
SMIM11A-206ENST00000489469 NUP98P52948 1817 aa19.93■□□□□ 0.78
SMIM11A-206ENST00000489469 VAMP4O75379 141 aa19.93■□□□□ 0.78
SMIM11A-206ENST00000489469 GYS1P13807 737 aa19.93■□□□□ 0.78
SMIM11A-206ENST00000489469 POLD1P28340 1107 aa19.93■□□□□ 0.78
SMIM11A-206ENST00000489469 DSG3P32926 999 aa19.93■□□□□ 0.78
SMIM11A-206ENST00000489469 CHPF2Q9P2E5 772 aa19.93■□□□□ 0.78
SMIM11A-206ENST00000489469 CT47B1P0C2W7 299 aaPredicted RBP19.92■□□□□ 0.78
SMIM11A-206ENST00000489469 USPL1Q5W0Q7 1092 aa19.92■□□□□ 0.78
SMIM11A-206ENST00000489469 KIF6Q6ZMV9 814 aa19.92■□□□□ 0.78
SMIM11A-206ENST00000489469 ARXQ96QS3 562 aa19.92■□□□□ 0.78
SMIM11A-206ENST00000489469 TBC1D2BQ9UPU7 963 aa19.92■□□□□ 0.78
SMIM11A-206ENST00000489469 ZNF652Q9Y2D9 606 aa19.92■□□□□ 0.78
SMIM11A-206ENST00000489469 CLEC4GQ6UXB4 293 aa19.91■□□□□ 0.78
SMIM11A-206ENST00000489469 LRP10Q7Z4F1 713 aa19.91■□□□□ 0.78
SMIM11A-206ENST00000489469 ZNF428Q96B54 188 aa19.91■□□□□ 0.78
SMIM11A-206ENST00000489469 SRP68Q9UHB9 627 aaKnown RBP19.91■□□□□ 0.78
SMIM11A-206ENST00000489469 ERVV-1B6SEH8 477 aa19.9■□□□□ 0.78
SMIM11A-206ENST00000489469 PROSER3Q2NL68 480 aa19.9■□□□□ 0.78
SMIM11A-206ENST00000489469 CAMTA2O94983 1202 aa19.89■□□□□ 0.77
SMIM11A-206ENST00000489469 ANXA1P04083 346 aa19.89■□□□□ 0.77
SMIM11A-206ENST00000489469 MAP3K15Q6ZN16 1313 aa19.89■□□□□ 0.77
SMIM11A-206ENST00000489469 MSL1Q68DK7 614 aa19.88■□□□□ 0.77
SMIM11A-206ENST00000489469 COPS6Q7L5N1 327 aa19.88■□□□□ 0.77
SMIM11A-206ENST00000489469 SGIP1Q9BQI5 828 aa19.88■□□□□ 0.77
SMIM11A-206ENST00000489469 ABCB7O75027 752 aa19.87■□□□□ 0.77
SMIM11A-206ENST00000489469 PTGER2P43116 358 aa19.87■□□□□ 0.77
SMIM11A-206ENST00000489469 FKBP8Q14318 412 aa19.87■□□□□ 0.77
SMIM11A-206ENST00000489469 XAGE3Q8WTP9 111 aa19.87■□□□□ 0.77
SMIM11A-206ENST00000489469 BCL2L12Q9HB09 334 aa19.87■□□□□ 0.77
SMIM11A-206ENST00000489469 ANKRD36CQ5JPF3 1778 aa19.87■□□□□ 0.77
SMIM11A-206ENST00000489469 TTLL7Q6ZT98 887 aa19.86■□□□□ 0.77
SMIM11A-206ENST00000489469 ARFGEF2Q9Y6D5 1785 aa19.85■□□□□ 0.77
SMIM11A-206ENST00000489469 DDX58O95786 925 aaKnown RBP19.85■□□□□ 0.77
SMIM11A-206ENST00000489469 MMP10P09238 476 aa19.85■□□□□ 0.77
SMIM11A-206ENST00000489469 AIMP1Q12904 312 aaKnown RBP19.85■□□□□ 0.77
SMIM11A-206ENST00000489469 PARP3Q9Y6F1 533 aa19.85■□□□□ 0.77
SMIM11A-206ENST00000489469 AFDNP55196 1824 aaKnown RBP19.84■□□□□ 0.77
SMIM11A-206ENST00000489469 HSP90AB3PQ58FF7 597 aa19.84■□□□□ 0.77
SMIM11A-206ENST00000489469 GIGYF2Q6Y7W6 1299 aaKnown RBP19.84■□□□□ 0.77
SMIM11A-206ENST00000489469 PLBD2Q8NHP8 589 aa19.84■□□□□ 0.77
SMIM11A-206ENST00000489469 ZBTB3Q9H5J0 574 aa19.84■□□□□ 0.77
SMIM11A-206ENST00000489469 PPP1R1BQ9UD71 204 aaPredicted RBP19.84■□□□□ 0.77
SMIM11A-206ENST00000489469 TM4SF1P30408 202 aa19.83■□□□□ 0.77
SMIM11A-206ENST00000489469 ALDH1L2Q3SY69 923 aa19.83■□□□□ 0.77
SMIM11A-206ENST00000489469 ANKRD13DQ6ZTN6 518 aa19.83■□□□□ 0.77
SMIM11A-206ENST00000489469 ATP10DQ9P241 1426 aa19.83■□□□□ 0.76
SMIM11A-206ENST00000489469 CARMIL3Q8ND23 1372 aa19.83■□□□□ 0.76
SMIM11A-206ENST00000489469 NRXN2Q9P2S2 1712 aa19.82■□□□□ 0.76
SMIM11A-206ENST00000489469 NFIXQ14938 502 aa19.82■□□□□ 0.76
SMIM11A-206ENST00000489469 SETDB2Q96T68 719 aa19.82■□□□□ 0.76
SMIM11A-206ENST00000489469 PHAXQ9H814 394 aaKnown RBP19.82■□□□□ 0.76
SMIM11A-206ENST00000489469 TCERG1O14776 1098 aaKnown RBP19.81■□□□□ 0.76
SMIM11A-206ENST00000489469 HLFQ16534 295 aa19.81■□□□□ 0.76
SMIM11A-206ENST00000489469 TBC1D9BQ66K14 1250 aa19.81■□□□□ 0.76
SMIM11A-206ENST00000489469 KIF13BQ9NQT8 1826 aa19.81■□□□□ 0.76
SMIM11A-206ENST00000489469 POLRMTO00411 1230 aaKnown RBP19.8■□□□□ 0.76
SMIM11A-206ENST00000489469 FLIIQ13045 1269 aa19.8■□□□□ 0.76
SMIM11A-206ENST00000489469 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
SMIM11A-206ENST00000489469 NIP7Q9Y221 180 aaKnown RBP eCLIP19.8■□□□□ 0.76
SMIM11A-206ENST00000489469 DDR1Q08345 913 aa19.79■□□□□ 0.76
SMIM11A-206ENST00000489469 BICDL1Q6ZP65 573 aa19.79■□□□□ 0.76
SMIM11A-206ENST00000489469 SERPINB2P05120 415 aa19.78■□□□□ 0.76
SMIM11A-206ENST00000489469 TCIRG1Q13488 830 aa19.78■□□□□ 0.76
SMIM11A-206ENST00000489469 PARP10Q53GL7 1025 aa19.78■□□□□ 0.76
SMIM11A-206ENST00000489469 KSR2Q6VAB6 950 aa19.78■□□□□ 0.76
SMIM11A-206ENST00000489469 FKBP5Q13451 457 aaPredicted RBP19.77■□□□□ 0.76
SMIM11A-206ENST00000489469 POLA2Q14181 598 aa19.77■□□□□ 0.76
SMIM11A-206ENST00000489469 G2E3Q7L622 706 aa19.77■□□□□ 0.76
SMIM11A-206ENST00000489469 ZNF34Q8IZ26 560 aa19.77■□□□□ 0.76
SMIM11A-206ENST00000489469 MRPL50Q8N5N7 158 aaKnown RBP19.77■□□□□ 0.76
SMIM11A-206ENST00000489469 SSH1Q8WYL5 1049 aa19.77■□□□□ 0.76
SMIM11A-206ENST00000489469 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.76
SMIM11A-206ENST00000489469 SMC4Q9NTJ3 1288 aa19.77■□□□□ 0.76
SMIM11A-206ENST00000489469 IBTKQ9P2D0 1353 aaPredicted RBP19.77■□□□□ 0.76
SMIM11A-206ENST00000489469 NYXQ9GZU5 481 aa19.76■□□□□ 0.75
SMIM11A-206ENST00000489469 CD2APQ9Y5K6 639 aa19.76■□□□□ 0.75
SMIM11A-206ENST00000489469 PTPRCP08575 1304 aa19.76■□□□□ 0.75
SMIM11A-206ENST00000489469 PI4KAP2A4QPH2 592 aa19.75■□□□□ 0.75
SMIM11A-206ENST00000489469 BRPF1P55201 1214 aaPredicted RBP19.75■□□□□ 0.75
SMIM11A-206ENST00000489469 NEXNQ0ZGT2 675 aa19.75■□□□□ 0.75
SMIM11A-206ENST00000489469 TPTE2Q6XPS3 522 aa19.75■□□□□ 0.75
SMIM11A-206ENST00000489469 PPP1R42Q7Z4L9 355 aa19.75■□□□□ 0.75
SMIM11A-206ENST00000489469 NBPF5PQ86XG9 351 aaPredicted RBP19.75■□□□□ 0.75
SMIM11A-206ENST00000489469 PI4KAP1Q8N8J0 262 aa19.75■□□□□ 0.75
SMIM11A-206ENST00000489469 C10orf71Q711Q0 1435 aa19.75■□□□□ 0.75
SMIM11A-206ENST00000489469 RNF123Q5XPI4 1314 aa19.75■□□□□ 0.75
SMIM11A-206ENST00000489469 ADCY9O60503 1353 aa19.74■□□□□ 0.75
SMIM11A-206ENST00000489469 NPHP1O15259 732 aa19.74■□□□□ 0.75
SMIM11A-206ENST00000489469 GPTP24298 496 aa19.74■□□□□ 0.75
SMIM11A-206ENST00000489469 RARSP54136 660 aaKnown RBP19.74■□□□□ 0.75
SMIM11A-206ENST00000489469 TRIM28Q13263 835 aaKnown RBP19.74■□□□□ 0.75
SMIM11A-206ENST00000489469 CNBD1Q8NA66 436 aa19.74■□□□□ 0.75
SMIM11A-206ENST00000489469 METTL22Q9BUU2 404 aaPredicted RBP19.74■□□□□ 0.75
SMIM11A-206ENST00000489469 MAP3K2Q9Y2U5 619 aa19.74■□□□□ 0.75
SMIM11A-206ENST00000489469 KIF16BQ96L93 1317 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms