RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 NEFMP07197 916 aa15.89■□□□□ 0.13
SFXN3-207ENST00000489434 PRELPP51888 382 aa15.89■□□□□ 0.13
SFXN3-207ENST00000489434 NBPF5PQ86XG9 351 aaPredicted RBP15.89■□□□□ 0.13
SFXN3-207ENST00000489434 JMYQ8N9B5 988 aa15.89■□□□□ 0.13
SFXN3-207ENST00000489434 TAOK3Q9H2K8 898 aa15.89■□□□□ 0.13
SFXN3-207ENST00000489434 MASTLQ96GX5 879 aa15.88■□□□□ 0.13
SFXN3-207ENST00000489434 USP16Q9Y5T5 823 aa15.88■□□□□ 0.13
SFXN3-207ENST00000489434 LTBP3Q9NS15 1303 aa15.88■□□□□ 0.13
SFXN3-207ENST00000489434 DICER1Q9UPY3 1922 aaKnown RBP15.88■□□□□ 0.13
SFXN3-207ENST00000489434 PCNTO95613 3336 aa15.88■□□□□ 0.13
SFXN3-207ENST00000489434 FER1L6Q2WGJ9 1857 aa15.87■□□□□ 0.13
SFXN3-207ENST00000489434 HTATSF1O43719 755 aaKnown RBP15.87■□□□□ 0.13
SFXN3-207ENST00000489434 SRGNP10124 158 aa15.87■□□□□ 0.13
SFXN3-207ENST00000489434 PPP2R1AP30153 589 aa15.87■□□□□ 0.13
SFXN3-207ENST00000489434 PRPF40BQ6NWY9 871 aaKnown RBP15.87■□□□□ 0.13
SFXN3-207ENST00000489434 MCM10Q7L590 875 aa15.87■□□□□ 0.13
SFXN3-207ENST00000489434 COL11A2P13942 1736 aaPredicted RBP15.87■□□□□ 0.13
SFXN3-207ENST00000489434 BCORQ6W2J9 1755 aa15.86■□□□□ 0.13
SFXN3-207ENST00000489434 RGL2O15211 777 aa15.86■□□□□ 0.13
SFXN3-207ENST00000489434 TPTE2Q6XPS3 522 aa15.86■□□□□ 0.13
SFXN3-207ENST00000489434 PIP4K2AP48426 406 aaPredicted RBP15.85■□□□□ 0.13
SFXN3-207ENST00000489434 TAF7Q15545 349 aaPredicted RBP15.85■□□□□ 0.13
SFXN3-207ENST00000489434 SLX4Q8IY92 1834 aa15.84■□□□□ 0.13
SFXN3-207ENST00000489434 CACNA1SQ13698 1873 aa15.84■□□□□ 0.13
SFXN3-207ENST00000489434 NPR1P16066 1061 aa15.84■□□□□ 0.13
SFXN3-207ENST00000489434 NIP7Q9Y221 180 aaKnown RBP eCLIP15.84■□□□□ 0.13
SFXN3-207ENST00000489434 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
SFXN3-207ENST00000489434 GTF2E1P29083 439 aaPredicted RBP15.83■□□□□ 0.12
SFXN3-207ENST00000489434 CCDC93Q567U6 631 aa15.83■□□□□ 0.12
SFXN3-207ENST00000489434 IQCA1LA6NCM1 817 aa15.82■□□□□ 0.12
SFXN3-207ENST00000489434 POTECB2RU33 542 aa15.82■□□□□ 0.12
SFXN3-207ENST00000489434 DCTN1Q14203 1278 aa15.82■□□□□ 0.12
SFXN3-207ENST00000489434 PNISRQ8TF01 805 aaKnown RBP15.82■□□□□ 0.12
SFXN3-207ENST00000489434 ARFGEF2Q9Y6D5 1785 aa15.82■□□□□ 0.12
SFXN3-207ENST00000489434 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
SFXN3-207ENST00000489434 NBPF26B4DH59 902 aa15.8■□□□□ 0.12
SFXN3-207ENST00000489434 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
SFXN3-207ENST00000489434 NBPF10Q6P3W6 841 aaKnown RBP15.8■□□□□ 0.12
SFXN3-207ENST00000489434 RTKN2Q8IZC4 609 aa15.8■□□□□ 0.12
SFXN3-207ENST00000489434 NBPF15Q8N660 670 aa15.8■□□□□ 0.12
SFXN3-207ENST00000489434 KLRG2A4D1S0 409 aaPredicted RBP15.79■□□□□ 0.12
SFXN3-207ENST00000489434 FAM177BA6PVY3 158 aa15.79■□□□□ 0.12
SFXN3-207ENST00000489434 ALDH1B1P30837 517 aa15.79■□□□□ 0.12
SFXN3-207ENST00000489434 C7orf43Q8WVR3 580 aa15.79■□□□□ 0.12
SFXN3-207ENST00000489434 NYXQ9GZU5 481 aa15.79■□□□□ 0.12
SFXN3-207ENST00000489434 PNNQ9H307 717 aaKnown RBP15.79■□□□□ 0.12
SFXN3-207ENST00000489434 FKBP4Q02790 459 aaKnown RBP eCLIP15.78■□□□□ 0.12
SFXN3-207ENST00000489434 COL13A1Q5TAT6 717 aaPredicted RBP15.78■□□□□ 0.12
SFXN3-207ENST00000489434 MIS18AQ9NYP9 233 aa15.78■□□□□ 0.12
SFXN3-207ENST00000489434 ERVV-1B6SEH8 477 aa15.77■□□□□ 0.12
SFXN3-207ENST00000489434 KIF6Q6ZMV9 814 aa15.77■□□□□ 0.12
SFXN3-207ENST00000489434 CREBZFQ9NS37 354 aa15.77■□□□□ 0.12
SFXN3-207ENST00000489434 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
SFXN3-207ENST00000489434 SCN4AP35499 1836 aa15.76■□□□□ 0.11
SFXN3-207ENST00000489434 HLFQ16534 295 aa15.76■□□□□ 0.11
SFXN3-207ENST00000489434 LDHDQ86WU2 507 aa15.76■□□□□ 0.11
SFXN3-207ENST00000489434 TNS4Q8IZW8 715 aa15.76■□□□□ 0.11
SFXN3-207ENST00000489434 NGEFQ8N5V2 710 aa15.76■□□□□ 0.11
SFXN3-207ENST00000489434 L3MBTL3Q96JM7 780 aaPredicted RBP15.76■□□□□ 0.11
SFXN3-207ENST00000489434 ZNF277Q9NRM2 450 aaPredicted RBP15.76■□□□□ 0.11
SFXN3-207ENST00000489434 LAMB4A4D0S4 1761 aa15.76■□□□□ 0.11
SFXN3-207ENST00000489434 HSPA1AP0DMV8 641 aaKnown RBP15.75■□□□□ 0.11
SFXN3-207ENST00000489434 HSPA1BP0DMV9 641 aaKnown RBP15.75■□□□□ 0.11
SFXN3-207ENST00000489434 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
SFXN3-207ENST00000489434 DLG5Q8TDM6 1919 aa15.74■□□□□ 0.11
SFXN3-207ENST00000489434 MAP3K15Q6ZN16 1313 aa15.74■□□□□ 0.11
SFXN3-207ENST00000489434 NFE2L2Q16236 605 aa15.74■□□□□ 0.11
SFXN3-207ENST00000489434 CC2D2BQ6DHV5 1058 aa15.74■□□□□ 0.11
SFXN3-207ENST00000489434 JDP2Q8WYK2 163 aa15.74■□□□□ 0.11
SFXN3-207ENST00000489434 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
SFXN3-207ENST00000489434 TAF1DQ9H5J8 278 aaPredicted RBP15.74■□□□□ 0.11
SFXN3-207ENST00000489434 HACL1Q9UJ83 578 aa15.74■□□□□ 0.11
SFXN3-207ENST00000489434 POTEIP0CG38 1075 aa15.73■□□□□ 0.11
SFXN3-207ENST00000489434 POTEJP0CG39 1038 aa15.73■□□□□ 0.11
SFXN3-207ENST00000489434 IARSP41252 1262 aaKnown RBP15.73■□□□□ 0.11
SFXN3-207ENST00000489434 EIF4A1P60842 406 aaKnown RBP15.73■□□□□ 0.11
SFXN3-207ENST00000489434 GRIPAP1Q4V328 841 aa15.73■□□□□ 0.11
SFXN3-207ENST00000489434 EAPPQ56P03 285 aaPredicted RBP15.73■□□□□ 0.11
SFXN3-207ENST00000489434 PNMA8AQ86V59 439 aaPredicted RBP15.73■□□□□ 0.11
SFXN3-207ENST00000489434 SYNE4Q8N205 404 aa15.73■□□□□ 0.11
SFXN3-207ENST00000489434 NUP98P52948 1817 aa15.73■□□□□ 0.11
SFXN3-207ENST00000489434 MYL6BP14649 208 aa15.72■□□□□ 0.11
SFXN3-207ENST00000489434 CRY2Q49AN0 593 aa15.72■□□□□ 0.11
SFXN3-207ENST00000489434 OLFM4Q6UX06 510 aa15.72■□□□□ 0.11
SFXN3-207ENST00000489434 NUTM1Q86Y26 1132 aa15.72■□□□□ 0.11
SFXN3-207ENST00000489434 MKRN1Q9UHC7 482 aaKnown RBP15.72■□□□□ 0.11
SFXN3-207ENST00000489434 CLEC11AQ9Y240 323 aa15.72■□□□□ 0.11
SFXN3-207ENST00000489434 KDM3BQ7LBC6 1761 aa15.72■□□□□ 0.11
SFXN3-207ENST00000489434 ERBB4Q15303 1308 aa15.71■□□□□ 0.11
SFXN3-207ENST00000489434 ZNF541Q9H0D2 1346 aa15.71■□□□□ 0.11
SFXN3-207ENST00000489434 GPTP24298 496 aa15.71■□□□□ 0.11
SFXN3-207ENST00000489434 GPC2Q8N158 579 aa15.71■□□□□ 0.11
SFXN3-207ENST00000489434 PLEKHF1Q96S99 279 aa15.71■□□□□ 0.11
SFXN3-207ENST00000489434 PSMD1Q99460 953 aa15.71■□□□□ 0.11
SFXN3-207ENST00000489434 TMX4Q9H1E5 349 aaPredicted RBP15.71■□□□□ 0.11
SFXN3-207ENST00000489434 IBTKQ9P2D0 1353 aaPredicted RBP15.71■□□□□ 0.11
SFXN3-207ENST00000489434 CAPN15O75808 1086 aa15.7■□□□□ 0.1
SFXN3-207ENST00000489434 EPHX2P34913 555 aa15.7■□□□□ 0.1
SFXN3-207ENST00000489434 EIF6P56537 245 aaKnown RBP15.7■□□□□ 0.1
SFXN3-207ENST00000489434 TTLL7Q6ZT98 887 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms