RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 RRAGCQ9HB90 399 aa17.64■□□□□ 0.41
LMO4-203ENST00000489303 ZNF219Q9P2Y4 722 aaPredicted RBP17.64■□□□□ 0.41
LMO4-203ENST00000489303 ZNF652Q9Y2D9 606 aa17.64■□□□□ 0.41
LMO4-203ENST00000489303 LAS1LQ9Y4W2 734 aaKnown RBP17.64■□□□□ 0.41
LMO4-203ENST00000489303 TTLL6Q8N841 843 aa17.63■□□□□ 0.41
LMO4-203ENST00000489303 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
LMO4-203ENST00000489303 TRIM35Q9UPQ4 493 aa17.63■□□□□ 0.41
LMO4-203ENST00000489303 NBPF26B4DH59 902 aa17.62■□□□□ 0.41
LMO4-203ENST00000489303 NFKBIEO00221 500 aa17.62■□□□□ 0.41
LMO4-203ENST00000489303 APAF1O14727 1248 aa17.62■□□□□ 0.41
LMO4-203ENST00000489303 NPHP1O15259 732 aa17.62■□□□□ 0.41
LMO4-203ENST00000489303 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
LMO4-203ENST00000489303 NBPF10Q6P3W6 841 aaKnown RBP17.62■□□□□ 0.41
LMO4-203ENST00000489303 CLEC4GQ6UXB4 293 aa17.62■□□□□ 0.41
LMO4-203ENST00000489303 NBPF15Q8N660 670 aa17.62■□□□□ 0.41
LMO4-203ENST00000489303 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
LMO4-203ENST00000489303 CCDC88AQ3V6T2 1871 aa17.62■□□□□ 0.41
LMO4-203ENST00000489303 H0YIN7 160 aa17.61■□□□□ 0.41
LMO4-203ENST00000489303 ZNF622Q969S3 477 aaKnown RBP eCLIP17.61■□□□□ 0.41
LMO4-203ENST00000489303 BCORQ6W2J9 1755 aa17.61■□□□□ 0.41
LMO4-203ENST00000489303 CHL1O00533 1208 aa17.6■□□□□ 0.41
LMO4-203ENST00000489303 RGL2O15211 777 aa17.6■□□□□ 0.41
LMO4-203ENST00000489303 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
LMO4-203ENST00000489303 DNAJC5GQ8N7S2 189 aa17.6■□□□□ 0.41
LMO4-203ENST00000489303 ERBB4Q15303 1308 aa17.6■□□□□ 0.41
LMO4-203ENST00000489303 KDM3BQ7LBC6 1761 aa17.6■□□□□ 0.41
LMO4-203ENST00000489303 C21orf2O43822 256 aa17.59■□□□□ 0.41
LMO4-203ENST00000489303 MYL6BP14649 208 aa17.59■□□□□ 0.41
LMO4-203ENST00000489303 EIF2S2P20042 333 aaKnown RBP17.59■□□□□ 0.41
LMO4-203ENST00000489303 CCDC184Q52MB2 194 aa17.59■□□□□ 0.41
LMO4-203ENST00000489303 KIF6Q6ZMV9 814 aa17.59■□□□□ 0.41
LMO4-203ENST00000489303 LMNB1P20700 586 aa17.58■□□□□ 0.4
LMO4-203ENST00000489303 RBM46Q8TBY0 533 aaKnown RBP17.58■□□□□ 0.4
LMO4-203ENST00000489303 CFAP44Q96MT7 982 aa17.58■□□□□ 0.4
LMO4-203ENST00000489303 BRIP1Q9BX63 1249 aa17.58■□□□□ 0.4
LMO4-203ENST00000489303 CACNA1SQ13698 1873 aa17.58■□□□□ 0.4
LMO4-203ENST00000489303 TIAM2Q8IVF5 1701 aa17.58■□□□□ 0.4
LMO4-203ENST00000489303 KDM2BQ8NHM5 1336 aa17.57■□□□□ 0.4
LMO4-203ENST00000489303 APLP1P51693 650 aa17.57■□□□□ 0.4
LMO4-203ENST00000489303 ST5P78524 1137 aa17.57■□□□□ 0.4
LMO4-203ENST00000489303 CNBD1Q8NA66 436 aa17.57■□□□□ 0.4
LMO4-203ENST00000489303 PDZRN3Q9UPQ7 1066 aa17.57■□□□□ 0.4
LMO4-203ENST00000489303 SLX4Q8IY92 1834 aa17.56■□□□□ 0.4
LMO4-203ENST00000489303 WDR90Q96KV7 1748 aa17.56■□□□□ 0.4
LMO4-203ENST00000489303 TNRC6CQ9HCJ0 1690 aaKnown RBP17.56■□□□□ 0.4
LMO4-203ENST00000489303 PDE6BP35913 854 aa17.56■□□□□ 0.4
LMO4-203ENST00000489303 GNAI1P63096 354 aa17.56■□□□□ 0.4
LMO4-203ENST00000489303 NBPF5PQ86XG9 351 aaPredicted RBP17.56■□□□□ 0.4
LMO4-203ENST00000489303 ERVV-1B6SEH8 477 aa17.55■□□□□ 0.4
LMO4-203ENST00000489303 C16orf71Q8IYS4 520 aaPredicted RBP17.55■□□□□ 0.4
LMO4-203ENST00000489303 IFT57Q9NWB7 429 aa17.55■□□□□ 0.4
LMO4-203ENST00000489303 NIP7Q9Y221 180 aaKnown RBP eCLIP17.55■□□□□ 0.4
LMO4-203ENST00000489303 LAMB4A4D0S4 1761 aa17.55■□□□□ 0.4
LMO4-203ENST00000489303 MAP3K15Q6ZN16 1313 aa17.54■□□□□ 0.4
LMO4-203ENST00000489303 GLTPD2A6NH11 291 aa17.54■□□□□ 0.4
LMO4-203ENST00000489303 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
LMO4-203ENST00000489303 POTECB2RU33 542 aa17.54■□□□□ 0.4
LMO4-203ENST00000489303 HOXB7P09629 217 aa17.54■□□□□ 0.4
LMO4-203ENST00000489303 HLFQ16534 295 aa17.54■□□□□ 0.4
LMO4-203ENST00000489303 TPTE2Q6XPS3 522 aa17.54■□□□□ 0.4
LMO4-203ENST00000489303 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
LMO4-203ENST00000489303 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
LMO4-203ENST00000489303 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
LMO4-203ENST00000489303 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
LMO4-203ENST00000489303 SRGNP10124 158 aa17.52■□□□□ 0.4
LMO4-203ENST00000489303 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
LMO4-203ENST00000489303 TTLL7Q6ZT98 887 aa17.52■□□□□ 0.4
LMO4-203ENST00000489303 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
LMO4-203ENST00000489303 ZBTB3Q9H5J0 574 aa17.52■□□□□ 0.4
LMO4-203ENST00000489303 ZNF853P0CG23 659 aa17.51■□□□□ 0.39
LMO4-203ENST00000489303 CCDC27Q2M243 656 aa17.51■□□□□ 0.39
LMO4-203ENST00000489303 IFFO2Q5TF58 517 aa17.51■□□□□ 0.39
LMO4-203ENST00000489303 PRPF40BQ6NWY9 871 aaKnown RBP17.51■□□□□ 0.39
LMO4-203ENST00000489303 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
LMO4-203ENST00000489303 FSTL1Q12841 308 aa17.5■□□□□ 0.39
LMO4-203ENST00000489303 PDIA6Q15084 440 aa17.5■□□□□ 0.39
LMO4-203ENST00000489303 KRT24Q2M2I5 525 aa17.5■□□□□ 0.39
LMO4-203ENST00000489303 DUSP27Q5VZP5 1158 aa17.5■□□□□ 0.39
LMO4-203ENST00000489303 NYXQ9GZU5 481 aa17.5■□□□□ 0.39
LMO4-203ENST00000489303 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
LMO4-203ENST00000489303 ZC3H4Q9UPT8 1303 aaKnown RBP17.49■□□□□ 0.39
LMO4-203ENST00000489303 ERFEQ4G0M1 354 aa17.49■□□□□ 0.39
LMO4-203ENST00000489303 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
LMO4-203ENST00000489303 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
LMO4-203ENST00000489303 GIGYF2Q6Y7W6 1299 aaKnown RBP17.49■□□□□ 0.39
LMO4-203ENST00000489303 SLC51AQ86UW1 340 aa17.49■□□□□ 0.39
LMO4-203ENST00000489303 MASTLQ96GX5 879 aa17.49■□□□□ 0.39
LMO4-203ENST00000489303 DICER1Q9UPY3 1922 aaKnown RBP17.49■□□□□ 0.39
LMO4-203ENST00000489303 ARFGEF2Q9Y6D5 1785 aa17.48■□□□□ 0.39
LMO4-203ENST00000489303 ANXA1P04083 346 aa17.48■□□□□ 0.39
LMO4-203ENST00000489303 VEGFAP15692 232 aaPredicted RBP17.48■□□□□ 0.39
LMO4-203ENST00000489303 AIMP1Q12904 312 aaKnown RBP17.48■□□□□ 0.39
LMO4-203ENST00000489303 PROSER3Q2NL68 480 aa17.48■□□□□ 0.39
LMO4-203ENST00000489303 COPS6Q7L5N1 327 aa17.48■□□□□ 0.39
LMO4-203ENST00000489303 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
LMO4-203ENST00000489303 C7orf43Q8WVR3 580 aa17.48■□□□□ 0.39
LMO4-203ENST00000489303 CNKSR1Q969H4 720 aa17.48■□□□□ 0.39
LMO4-203ENST00000489303 DBF4Q9UBU7 674 aaPredicted RBP17.48■□□□□ 0.39
LMO4-203ENST00000489303 POTEIP0CG38 1075 aa17.47■□□□□ 0.39
LMO4-203ENST00000489303 POTEJP0CG39 1038 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms