RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PSMA6P60900 246 aaKnown RBP7.88□□□□□ -1.15
XRN1-213ENST00000489241 LAMC2Q13753 1193 aa7.88□□□□□ -1.15
XRN1-213ENST00000489241 TBCELQ5QJ74 424 aa7.88□□□□□ -1.15
XRN1-213ENST00000489241 ALYREFQ86V81 257 aaKnown RBP7.88□□□□□ -1.15
XRN1-213ENST00000489241 LARGE2Q8N3Y3 721 aa7.88□□□□□ -1.15
XRN1-213ENST00000489241 OGFOD1Q8N543 542 aa7.88□□□□□ -1.15
XRN1-213ENST00000489241 SERTM1A2A2V5 107 aa7.87□□□□□ -1.15
XRN1-213ENST00000489241 PALM3A6NDB9 673 aaPredicted RBP7.87□□□□□ -1.15
XRN1-213ENST00000489241 M0R2N6 131 aa7.87□□□□□ -1.15
XRN1-213ENST00000489241 PIK3R2O00459 728 aa7.87□□□□□ -1.15
XRN1-213ENST00000489241 EFSO43281 561 aa7.87□□□□□ -1.15
XRN1-213ENST00000489241 HOXB4P17483 251 aaPredicted RBP7.87□□□□□ -1.15
XRN1-213ENST00000489241 SUZ12Q15022 739 aaKnown RBP7.87□□□□□ -1.15
XRN1-213ENST00000489241 SIX5Q8N196 739 aa7.87□□□□□ -1.15
XRN1-213ENST00000489241 MARK1Q9P0L2 795 aa7.87□□□□□ -1.15
XRN1-213ENST00000489241 MKRN1Q9UHC7 482 aaKnown RBP7.87□□□□□ -1.15
XRN1-213ENST00000489241 ZNF468Q5VIY5 522 aaPredicted RBP7.86□□□□□ -1.15
XRN1-213ENST00000489241 BTBD6Q96KE9 485 aa7.86□□□□□ -1.15
XRN1-213ENST00000489241 TSPAN10Q9H1Z9 355 aaPredicted RBP7.86□□□□□ -1.15
XRN1-213ENST00000489241 CHMP3Q9Y3E7 222 aa7.86□□□□□ -1.15
XRN1-213ENST00000489241 MSTNO14793 375 aa7.85□□□□□ -1.15
XRN1-213ENST00000489241 ITGB2P05107 769 aa7.85□□□□□ -1.15
XRN1-213ENST00000489241 RFX1P22670 979 aa7.85□□□□□ -1.15
XRN1-213ENST00000489241 LMOD1P29536 600 aaPredicted RBP7.85□□□□□ -1.15
XRN1-213ENST00000489241 DGKGP49619 791 aa7.85□□□□□ -1.15
XRN1-213ENST00000489241 HIRAP54198 1017 aaPredicted RBP7.85□□□□□ -1.15
XRN1-213ENST00000489241 SH3PXD2AQ5TCZ1 1133 aa7.85□□□□□ -1.15
XRN1-213ENST00000489241 LRRC69Q6ZNQ3 347 aa7.85□□□□□ -1.15
XRN1-213ENST00000489241 FCHSD1Q86WN1 690 aa7.85□□□□□ -1.15
XRN1-213ENST00000489241 RHPN1Q8TCX5 695 aa7.85□□□□□ -1.15
XRN1-213ENST00000489241 ZNF594Q96JF6 807 aaPredicted RBP7.85□□□□□ -1.15
XRN1-213ENST00000489241 SPOCK3Q9BQ16 436 aa7.85□□□□□ -1.15
XRN1-213ENST00000489241 GNB5O14775 395 aa7.84□□□□□ -1.15
XRN1-213ENST00000489241 POTEAQ6S8J7 498 aa7.84□□□□□ -1.15
XRN1-213ENST00000489241 LINC00114Q6XXX2 140 aa7.84□□□□□ -1.15
XRN1-213ENST00000489241 CHSY3Q70JA7 882 aa7.84□□□□□ -1.15
XRN1-213ENST00000489241 STRN4Q9NRL3 753 aa7.84□□□□□ -1.15
XRN1-213ENST00000489241 KLF15Q9UIH9 416 aa7.84□□□□□ -1.15
XRN1-213ENST00000489241 PRR12Q9ULL5 1215 aa7.84□□□□□ -1.15
XRN1-213ENST00000489241 RBM19Q9Y4C8 960 aaKnown RBP7.84□□□□□ -1.15
XRN1-213ENST00000489241 DKK1O94907 266 aa7.83□□□□□ -1.16
XRN1-213ENST00000489241 PDIA4P13667 645 aaKnown RBP7.83□□□□□ -1.16
XRN1-213ENST00000489241 COL8A1P27658 744 aa7.83□□□□□ -1.16
XRN1-213ENST00000489241 CFAP70Q5T0N1 1121 aa7.83□□□□□ -1.16
XRN1-213ENST00000489241 C1orf53Q5VUE5 145 aa7.83□□□□□ -1.16
XRN1-213ENST00000489241 TSEN2Q8NCE0 465 aaKnown RBP7.83□□□□□ -1.16
XRN1-213ENST00000489241 C7orf43Q8WVR3 580 aa7.83□□□□□ -1.16
XRN1-213ENST00000489241 NEUROD4Q9HD90 331 aa7.83□□□□□ -1.16
XRN1-213ENST00000489241 MAFBQ9Y5Q3 323 aaPredicted RBP7.83□□□□□ -1.16
XRN1-213ENST00000489241 ACIN1Q9UKV3 1341 aaKnown RBP7.82□□□□□ -1.16
XRN1-213ENST00000489241 LOC100996750A0A140TA64 210 aa7.82□□□□□ -1.16
XRN1-213ENST00000489241 PROCP04070 461 aa7.82□□□□□ -1.16
XRN1-213ENST00000489241 PCBP4P57723 403 aaKnown RBP7.82□□□□□ -1.16
XRN1-213ENST00000489241 GRIN2CQ14957 1233 aa7.82□□□□□ -1.16
XRN1-213ENST00000489241 KRTAP4-6Q9BYQ5 205 aa7.82□□□□□ -1.16
XRN1-213ENST00000489241 KRBA1A5PL33 1030 aa7.81□□□□□ -1.16
XRN1-213ENST00000489241 SFI1A8K8P3 1242 aa7.81□□□□□ -1.16
XRN1-213ENST00000489241 PPP1R15AO75807 674 aaPredicted RBP7.81□□□□□ -1.16
XRN1-213ENST00000489241 RASA1P20936 1047 aa7.81□□□□□ -1.16
XRN1-213ENST00000489241 PHACTR1Q9C0D0 580 aa7.81□□□□□ -1.16
XRN1-213ENST00000489241 SUV39H2Q9H5I1 410 aa7.81□□□□□ -1.16
XRN1-213ENST00000489241 VRTNQ9H8Y1 702 aa7.81□□□□□ -1.16
XRN1-213ENST00000489241 NOP53Q9NZM5 478 aaKnown RBP7.81□□□□□ -1.16
XRN1-213ENST00000489241 PPP1R12BO60237 982 aaPredicted RBP7.8□□□□□ -1.16
XRN1-213ENST00000489241 PBXIP1Q96AQ6 731 aa7.8□□□□□ -1.16
XRN1-213ENST00000489241 ANKIB1Q9P2G1 1089 aa7.8□□□□□ -1.16
XRN1-213ENST00000489241 SIN3BO75182 1162 aa7.79□□□□□ -1.16
XRN1-213ENST00000489241 SEC13P55735 322 aa7.79□□□□□ -1.16
XRN1-213ENST00000489241 SYT9Q86SS6 491 aa7.79□□□□□ -1.16
XRN1-213ENST00000489241 STAG2Q8N3U4 1231 aa7.79□□□□□ -1.16
XRN1-213ENST00000489241 HSH2DQ96JZ2 352 aa7.79□□□□□ -1.16
XRN1-213ENST00000489241 HCN4Q9Y3Q4 1203 aa7.79□□□□□ -1.16
XRN1-213ENST00000489241 ELOA3CA0A087WX78 387 aaPredicted RBP7.78□□□□□ -1.16
XRN1-213ENST00000489241 ELOA3DA6NLF2 546 aaPredicted RBP7.78□□□□□ -1.16
XRN1-213ENST00000489241 C21orf2O43822 256 aa7.78□□□□□ -1.16
XRN1-213ENST00000489241 TYRO3Q06418 890 aa7.78□□□□□ -1.16
XRN1-213ENST00000489241 SFSWAPQ12872 951 aaKnown RBP7.78□□□□□ -1.16
XRN1-213ENST00000489241 ELOA3BQ3SY89 546 aa7.78□□□□□ -1.16
XRN1-213ENST00000489241 LARP1Q6PKG0 1096 aaKnown RBP7.78□□□□□ -1.16
XRN1-213ENST00000489241 ELOA3Q8NG57 546 aa7.78□□□□□ -1.16
XRN1-213ENST00000489241 GAS2L2Q8NHY3 880 aa7.78□□□□□ -1.16
XRN1-213ENST00000489241 BRD7Q9NPI1 651 aa7.78□□□□□ -1.16
XRN1-213ENST00000489241 KANK4Q5T7N3 995 aaPredicted RBP7.77□□□□□ -1.17
XRN1-213ENST00000489241 SUSD3Q96L08 255 aa7.77□□□□□ -1.17
XRN1-213ENST00000489241 CEP63Q96MT8 703 aa7.77□□□□□ -1.17
XRN1-213ENST00000489241 MDFIQ99750 246 aa7.77□□□□□ -1.17
XRN1-213ENST00000489241 C2orf49Q9BVC5 232 aaPredicted RBP7.77□□□□□ -1.17
XRN1-213ENST00000489241 ATAD2Q6PL18 1390 aa7.76□□□□□ -1.17
XRN1-213ENST00000489241 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.76□□□□□ -1.17
XRN1-213ENST00000489241 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
XRN1-213ENST00000489241 ALAS2P22557 587 aa7.76□□□□□ -1.17
XRN1-213ENST00000489241 KCNQ4P56696 695 aa7.76□□□□□ -1.17
XRN1-213ENST00000489241 SPEM2Q0P670 501 aa7.76□□□□□ -1.17
XRN1-213ENST00000489241 NEUROD1Q13562 356 aa7.76□□□□□ -1.17
XRN1-213ENST00000489241 HIF1AQ16665 826 aa7.76□□□□□ -1.17
XRN1-213ENST00000489241 CRTC2Q53ET0 693 aaPredicted RBP7.76□□□□□ -1.17
XRN1-213ENST00000489241 ALDH16A1Q8IZ83 802 aa7.76□□□□□ -1.17
XRN1-213ENST00000489241 SCG3Q8WXD2 468 aaKnown RBP7.76□□□□□ -1.17
XRN1-213ENST00000489241 TNFRSF25Q93038 417 aa7.76□□□□□ -1.17
XRN1-213ENST00000489241 SLC30A3Q99726 388 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms