RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 H0YIN7 160 aa18.4■□□□□ 0.54
VTI1A-206ENST00000489142 HLFQ16534 295 aa18.4■□□□□ 0.54
VTI1A-206ENST00000489142 GPBP1L1Q9HC44 474 aaPredicted RBP18.4■□□□□ 0.54
VTI1A-206ENST00000489142 CCDC184Q52MB2 194 aa18.39■□□□□ 0.53
VTI1A-206ENST00000489142 TTLL7Q6ZT98 887 aa18.39■□□□□ 0.53
VTI1A-206ENST00000489142 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
VTI1A-206ENST00000489142 ZNF622Q969S3 477 aaKnown RBP eCLIP18.39■□□□□ 0.53
VTI1A-206ENST00000489142 NIP7Q9Y221 180 aaKnown RBP eCLIP18.39■□□□□ 0.53
VTI1A-206ENST00000489142 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
VTI1A-206ENST00000489142 CCDC88AQ3V6T2 1871 aa18.38■□□□□ 0.53
VTI1A-206ENST00000489142 EIF2S2P20042 333 aaKnown RBP18.38■□□□□ 0.53
VTI1A-206ENST00000489142 C1QTNF8P60827 252 aa18.38■□□□□ 0.53
VTI1A-206ENST00000489142 RASSF7Q02833 373 aa18.38■□□□□ 0.53
VTI1A-206ENST00000489142 KRT24Q2M2I5 525 aa18.38■□□□□ 0.53
VTI1A-206ENST00000489142 CLEC4GQ6UXB4 293 aa18.38■□□□□ 0.53
VTI1A-206ENST00000489142 TTLL6Q8N841 843 aa18.38■□□□□ 0.53
VTI1A-206ENST00000489142 NECTIN2Q92692 538 aa18.38■□□□□ 0.53
VTI1A-206ENST00000489142 BRIP1Q9BX63 1249 aa18.38■□□□□ 0.53
VTI1A-206ENST00000489142 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
VTI1A-206ENST00000489142 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
VTI1A-206ENST00000489142 ANXA1P04083 346 aa18.37■□□□□ 0.53
VTI1A-206ENST00000489142 PDE6BP35913 854 aa18.37■□□□□ 0.53
VTI1A-206ENST00000489142 ST5P78524 1137 aa18.37■□□□□ 0.53
VTI1A-206ENST00000489142 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
VTI1A-206ENST00000489142 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
VTI1A-206ENST00000489142 PROSER3Q2NL68 480 aa18.36■□□□□ 0.53
VTI1A-206ENST00000489142 SLX4Q8IY92 1834 aa18.36■□□□□ 0.53
VTI1A-206ENST00000489142 ZBTB3Q9H5J0 574 aa18.36■□□□□ 0.53
VTI1A-206ENST00000489142 TNRC6CQ9HCJ0 1690 aaKnown RBP18.35■□□□□ 0.53
VTI1A-206ENST00000489142 APAF1O14727 1248 aa18.35■□□□□ 0.53
VTI1A-206ENST00000489142 KIF6Q6ZMV9 814 aa18.35■□□□□ 0.53
VTI1A-206ENST00000489142 RNF181Q9P0P0 153 aa18.35■□□□□ 0.53
VTI1A-206ENST00000489142 ARFGEF2Q9Y6D5 1785 aa18.35■□□□□ 0.53
VTI1A-206ENST00000489142 MAP3K15Q6ZN16 1313 aa18.34■□□□□ 0.53
VTI1A-206ENST00000489142 CHL1O00533 1208 aa18.34■□□□□ 0.53
VTI1A-206ENST00000489142 TIAM2Q8IVF5 1701 aa18.33■□□□□ 0.52
VTI1A-206ENST00000489142 GPTP24298 496 aa18.33■□□□□ 0.52
VTI1A-206ENST00000489142 PRELPP51888 382 aa18.33■□□□□ 0.52
VTI1A-206ENST00000489142 BABAM1Q9NWV8 329 aa18.33■□□□□ 0.52
VTI1A-206ENST00000489142 C21orf2O43822 256 aa18.32■□□□□ 0.52
VTI1A-206ENST00000489142 PDIA6Q15084 440 aa18.32■□□□□ 0.52
VTI1A-206ENST00000489142 FER1L6Q2WGJ9 1857 aa18.31■□□□□ 0.52
VTI1A-206ENST00000489142 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
VTI1A-206ENST00000489142 ERVV-1B6SEH8 477 aa18.31■□□□□ 0.52
VTI1A-206ENST00000489142 SRGNP10124 158 aa18.31■□□□□ 0.52
VTI1A-206ENST00000489142 TPTE2Q6XPS3 522 aa18.31■□□□□ 0.52
VTI1A-206ENST00000489142 LRP10Q7Z4F1 713 aa18.31■□□□□ 0.52
VTI1A-206ENST00000489142 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
VTI1A-206ENST00000489142 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
VTI1A-206ENST00000489142 ANKRD36CQ5JPF3 1778 aa18.3■□□□□ 0.52
VTI1A-206ENST00000489142 UBN2Q6ZU65 1347 aa18.3■□□□□ 0.52
VTI1A-206ENST00000489142 NFKBIEO00221 500 aa18.3■□□□□ 0.52
VTI1A-206ENST00000489142 RGL2O15211 777 aa18.3■□□□□ 0.52
VTI1A-206ENST00000489142 PRPF40BQ6NWY9 871 aaKnown RBP18.3■□□□□ 0.52
VTI1A-206ENST00000489142 PDZRN3Q9UPQ7 1066 aa18.3■□□□□ 0.52
VTI1A-206ENST00000489142 KIF3CO14782 793 aa18.29■□□□□ 0.52
VTI1A-206ENST00000489142 GTF2E1P29083 439 aaPredicted RBP18.29■□□□□ 0.52
VTI1A-206ENST00000489142 AIMP1Q12904 312 aaKnown RBP18.29■□□□□ 0.52
VTI1A-206ENST00000489142 STYK1Q6J9G0 422 aa18.29■□□□□ 0.52
VTI1A-206ENST00000489142 MASTLQ96GX5 879 aa18.29■□□□□ 0.52
VTI1A-206ENST00000489142 NMRK2Q9NPI5 230 aa18.29■□□□□ 0.52
VTI1A-206ENST00000489142 MBIPQ9NS73 344 aa18.29■□□□□ 0.52
VTI1A-206ENST00000489142 ERFEQ4G0M1 354 aa18.28■□□□□ 0.52
VTI1A-206ENST00000489142 SUSD4Q5VX71 490 aa18.28■□□□□ 0.52
VTI1A-206ENST00000489142 CNKSR1Q969H4 720 aa18.28■□□□□ 0.52
VTI1A-206ENST00000489142 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
VTI1A-206ENST00000489142 COPS6Q7L5N1 327 aa18.27■□□□□ 0.52
VTI1A-206ENST00000489142 XAGE3Q8WTP9 111 aa18.27■□□□□ 0.52
VTI1A-206ENST00000489142 ZNF428Q96B54 188 aa18.27■□□□□ 0.52
VTI1A-206ENST00000489142 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
VTI1A-206ENST00000489142 DICER1Q9UPY3 1922 aaKnown RBP18.26■□□□□ 0.51
VTI1A-206ENST00000489142 ANP32CO43423 234 aa18.26■□□□□ 0.51
VTI1A-206ENST00000489142 LMNB1P20700 586 aa18.26■□□□□ 0.51
VTI1A-206ENST00000489142 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
VTI1A-206ENST00000489142 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
VTI1A-206ENST00000489142 GIGYF2Q6Y7W6 1299 aaKnown RBP18.26■□□□□ 0.51
VTI1A-206ENST00000489142 ZNF34Q8IZ26 560 aa18.26■□□□□ 0.51
VTI1A-206ENST00000489142 MRS2Q9HD23 443 aa18.26■□□□□ 0.51
VTI1A-206ENST00000489142 NPR1P16066 1061 aa18.25■□□□□ 0.51
VTI1A-206ENST00000489142 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
VTI1A-206ENST00000489142 NYXQ9GZU5 481 aa18.25■□□□□ 0.51
VTI1A-206ENST00000489142 KLRG2A4D1S0 409 aaPredicted RBP18.24■□□□□ 0.51
VTI1A-206ENST00000489142 NTSR2O95665 410 aa18.24■□□□□ 0.51
VTI1A-206ENST00000489142 ZNF853P0CG23 659 aa18.24■□□□□ 0.51
VTI1A-206ENST00000489142 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
VTI1A-206ENST00000489142 LAMB2P55268 1798 aa18.23■□□□□ 0.51
VTI1A-206ENST00000489142 ELL2O00472 640 aaPredicted RBP18.23■□□□□ 0.51
VTI1A-206ENST00000489142 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
VTI1A-206ENST00000489142 IFT57Q9NWB7 429 aa18.23■□□□□ 0.51
VTI1A-206ENST00000489142 IBTKQ9P2D0 1353 aaPredicted RBP18.22■□□□□ 0.51
VTI1A-206ENST00000489142 SLC51AQ86UW1 340 aa18.22■□□□□ 0.51
VTI1A-206ENST00000489142 TAOK3Q9H2K8 898 aa18.22■□□□□ 0.51
VTI1A-206ENST00000489142 KDM2BQ8NHM5 1336 aa18.22■□□□□ 0.51
VTI1A-206ENST00000489142 GNAI1P63096 354 aa18.21■□□□□ 0.51
VTI1A-206ENST00000489142 RRAGCQ9HB90 399 aa18.21■□□□□ 0.51
VTI1A-206ENST00000489142 HOXB7P09629 217 aa18.2■□□□□ 0.5
VTI1A-206ENST00000489142 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
VTI1A-206ENST00000489142 PPP1R42Q7Z4L9 355 aa18.2■□□□□ 0.5
VTI1A-206ENST00000489142 SYNE4Q8N205 404 aa18.2■□□□□ 0.5
VTI1A-206ENST00000489142 C8orf58Q8NAV2 365 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms