RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 NFATC2IPQ8NCF5 419 aa6.7□□□□□ -1.34
KDM3A-213ENST00000488971 NOP53Q9NZM5 478 aaKnown RBP6.7□□□□□ -1.34
KDM3A-213ENST00000488971 PRR12Q9ULL5 1215 aa6.7□□□□□ -1.34
KDM3A-213ENST00000488971 HOXB4P17483 251 aaPredicted RBP6.69□□□□□ -1.34
KDM3A-213ENST00000488971 KANK4Q5T7N3 995 aaPredicted RBP6.69□□□□□ -1.34
KDM3A-213ENST00000488971 CHSY3Q70JA7 882 aa6.69□□□□□ -1.34
KDM3A-213ENST00000488971 SND1Q7KZF4 910 aaKnown RBP eCLIP6.69□□□□□ -1.34
KDM3A-213ENST00000488971 FOXD4L4Q8WXT5 416 aaPredicted RBP6.69□□□□□ -1.34
KDM3A-213ENST00000488971 SLC4A9Q96Q91 983 aa6.69□□□□□ -1.34
KDM3A-213ENST00000488971 GNEQ9Y223 722 aaKnown RBP6.69□□□□□ -1.34
KDM3A-213ENST00000488971 IVNS1ABPQ9Y6Y0 642 aa6.69□□□□□ -1.34
KDM3A-213ENST00000488971 C1QTNF9BB2RNN3 333 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 TMEM229AB2RXF0 380 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 BACH1O14867 736 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 SKIP12755 728 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 DGKGP49619 791 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 PSME1Q06323 249 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 EML3Q32P44 896 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 CDCA8Q53HL2 280 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 FAM182BQ5T319 152 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 B4GALNT3Q6L9W6 998 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 ZIC5Q96T25 663 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 ZDHHC3Q9NYG2 299 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 PARP3Q9Y6F1 533 aa6.68□□□□□ -1.34
KDM3A-213ENST00000488971 PIK3CDO00329 1044 aa6.67□□□□□ -1.34
KDM3A-213ENST00000488971 PCBP4P57723 403 aaKnown RBP6.67□□□□□ -1.34
KDM3A-213ENST00000488971 MTFR1Q15390 333 aa6.67□□□□□ -1.34
KDM3A-213ENST00000488971 CCDC27Q2M243 656 aa6.67□□□□□ -1.34
KDM3A-213ENST00000488971 XP32Q5T750 250 aa6.67□□□□□ -1.34
KDM3A-213ENST00000488971 AVENQ9NQS1 362 aaPredicted RBP6.67□□□□□ -1.34
KDM3A-213ENST00000488971 IQSEC3Q9UPP2 1182 aaPredicted RBP6.67□□□□□ -1.34
KDM3A-213ENST00000488971 NOD1Q9Y239 953 aa6.67□□□□□ -1.34
KDM3A-213ENST00000488971 USP3Q9Y6I4 520 aa6.67□□□□□ -1.34
KDM3A-213ENST00000488971 FAM157BP0CG42 384 aa6.66□□□□□ -1.34
KDM3A-213ENST00000488971 CD163Q86VB7 1156 aa6.66□□□□□ -1.34
KDM3A-213ENST00000488971 FCHSD1Q86WN1 690 aa6.66□□□□□ -1.34
KDM3A-213ENST00000488971 PLEKHM2Q8IWE5 1019 aa6.66□□□□□ -1.34
KDM3A-213ENST00000488971 NEUROD4Q9HD90 331 aa6.66□□□□□ -1.34
KDM3A-213ENST00000488971 MARK1Q9P0L2 795 aa6.66□□□□□ -1.34
KDM3A-213ENST00000488971 KLF15Q9UIH9 416 aa6.66□□□□□ -1.34
KDM3A-213ENST00000488971 AMOTL2Q9Y2J4 779 aa6.66□□□□□ -1.34
KDM3A-213ENST00000488971 PCDHGA11Q9Y5H2 935 aa6.66□□□□□ -1.34
KDM3A-213ENST00000488971 GTF2IP78347 998 aa6.65□□□□□ -1.34
KDM3A-213ENST00000488971 ZNF295-AS1Q8N0V1 137 aa6.65□□□□□ -1.34
KDM3A-213ENST00000488971 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
KDM3A-213ENST00000488971 HCN2Q9UL51 889 aa6.65□□□□□ -1.34
KDM3A-213ENST00000488971 ZMIZ1Q9ULJ6 1067 aa6.65□□□□□ -1.34
KDM3A-213ENST00000488971 USP17L3A6NCW0 530 aa6.64□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L4A6NCW7 530 aa6.64□□□□□ -1.35
KDM3A-213ENST00000488971 ALAS2P22557 587 aa6.64□□□□□ -1.35
KDM3A-213ENST00000488971 TXLNAP40222 546 aa6.64□□□□□ -1.35
KDM3A-213ENST00000488971 CHRNA4P43681 627 aa6.64□□□□□ -1.35
KDM3A-213ENST00000488971 RBM25P49756 843 aaKnown RBP6.64□□□□□ -1.35
KDM3A-213ENST00000488971 TMEM164Q5U3C3 297 aa6.64□□□□□ -1.35
KDM3A-213ENST00000488971 ZNF468Q5VIY5 522 aaPredicted RBP6.64□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L2Q6R6M4 530 aa6.64□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L1Q7RTZ2 530 aa6.64□□□□□ -1.35
KDM3A-213ENST00000488971 ZNF358Q9NW07 568 aa6.64□□□□□ -1.35
KDM3A-213ENST00000488971 FAM196BA6NMK8 535 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L5A8MUK1 530 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 LZTS3O60299 673 aaPredicted RBP6.63□□□□□ -1.35
KDM3A-213ENST00000488971 LAMC2Q13753 1193 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 NCOA4Q13772 614 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 SAMD5Q5TGI4 173 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 LRRC69Q6ZNQ3 347 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 STK32AQ8WU08 396 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 L3MBTL2Q969R5 705 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 ZNF428Q96B54 188 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 PLVAPQ9BX97 442 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 STRN4Q9NRL3 753 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 SCHIP1Q9P0W5 487 aaPredicted RBP6.63□□□□□ -1.35
KDM3A-213ENST00000488971 ZNF232Q9UNY5 417 aa6.63□□□□□ -1.35
KDM3A-213ENST00000488971 NOS2P35228 1153 aa6.62□□□□□ -1.35
KDM3A-213ENST00000488971 SYT9Q86SS6 491 aa6.62□□□□□ -1.35
KDM3A-213ENST00000488971 NOVA2Q9UNW9 492 aaKnown RBP6.62□□□□□ -1.35
KDM3A-213ENST00000488971 ELOA3CA0A087WX78 387 aaPredicted RBP6.61□□□□□ -1.35
KDM3A-213ENST00000488971 ELOA3DA6NLF2 546 aaPredicted RBP6.61□□□□□ -1.35
KDM3A-213ENST00000488971 EFSO43281 561 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 DOC2BQ14184 412 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 TEAD4Q15561 434 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 ELOA3BQ3SY89 546 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 PHLDB3Q6NSJ2 640 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 TXNDC2Q86VQ3 553 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 SLC9A9Q8IVB4 645 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 ELOA3Q8NG57 546 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 CCER1Q8TC90 406 aaPredicted RBP6.61□□□□□ -1.35
KDM3A-213ENST00000488971 ZDHHC1Q8WTX9 485 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 TRIM11Q96F44 468 aa6.61□□□□□ -1.35
KDM3A-213ENST00000488971 SPDYE3A6NKU9 549 aa6.6□□□□□ -1.35
KDM3A-213ENST00000488971 E9PSI1 815 aa6.6□□□□□ -1.35
KDM3A-213ENST00000488971 GATA4P43694 442 aa6.6□□□□□ -1.35
KDM3A-213ENST00000488971 TNS4Q8IZW8 715 aa6.6□□□□□ -1.35
KDM3A-213ENST00000488971 Q8N3U1 123 aa6.6□□□□□ -1.35
KDM3A-213ENST00000488971 SERTM1A2A2V5 107 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L15C9J2P7 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L10C9JJH3 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L13C9JLJ4 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L12C9JPN9 530 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms