RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ZNF330Q9Y3S2 320 aaPredicted RBP5.77□□□□□ -1.49
PRPF4-203ENST00000488937 NCANO14594 1321 aa5.76□□□□□ -1.49
PRPF4-203ENST00000488937 PRRG2O14669 202 aa5.76□□□□□ -1.49
PRPF4-203ENST00000488937 TRAK2O60296 914 aa5.76□□□□□ -1.49
PRPF4-203ENST00000488937 USP17L8P0C7I0 530 aa5.76□□□□□ -1.49
PRPF4-203ENST00000488937 PDIA4P13667 645 aaKnown RBP5.76□□□□□ -1.49
PRPF4-203ENST00000488937 RAC1P63000 192 aa5.76□□□□□ -1.49
PRPF4-203ENST00000488937 TMEM214Q6NUQ4 689 aaKnown RBP5.76□□□□□ -1.49
PRPF4-203ENST00000488937 IL27Q8NEV9 243 aa5.76□□□□□ -1.49
PRPF4-203ENST00000488937 CNKSR1Q969H4 720 aa5.76□□□□□ -1.49
PRPF4-203ENST00000488937 DCDC2BA2VCK2 349 aa5.75□□□□□ -1.49
PRPF4-203ENST00000488937 SPINK2P20155 84 aa5.75□□□□□ -1.49
PRPF4-203ENST00000488937 ESCO1Q5FWF5 840 aa5.75□□□□□ -1.49
PRPF4-203ENST00000488937 EPS8L1Q8TE68 723 aa5.75□□□□□ -1.49
PRPF4-203ENST00000488937 DBX1A6NMT0 343 aa5.74□□□□□ -1.49
PRPF4-203ENST00000488937 SIN3BO75182 1162 aa5.74□□□□□ -1.49
PRPF4-203ENST00000488937 MYCP01106 439 aaPredicted RBP5.74□□□□□ -1.49
PRPF4-203ENST00000488937 C1orf216Q8TAB5 229 aa5.74□□□□□ -1.49
PRPF4-203ENST00000488937 WFDC12Q8WWY7 111 aa5.74□□□□□ -1.49
PRPF4-203ENST00000488937 OSBPL3Q9H4L5 887 aa5.74□□□□□ -1.49
PRPF4-203ENST00000488937 PCDHB11Q9Y5F2 797 aa5.74□□□□□ -1.49
PRPF4-203ENST00000488937 KHNYNO15037 678 aaKnown RBP5.73□□□□□ -1.49
PRPF4-203ENST00000488937 FBXO31Q5XUX0 539 aaPredicted RBP5.73□□□□□ -1.49
PRPF4-203ENST00000488937 SYT9Q86SS6 491 aa5.73□□□□□ -1.49
PRPF4-203ENST00000488937 ASIC4Q96FT7 647 aa5.73□□□□□ -1.49
PRPF4-203ENST00000488937 HMX1Q9NP08 348 aaPredicted RBP5.73□□□□□ -1.49
PRPF4-203ENST00000488937 HRH3Q9Y5N1 445 aa5.73□□□□□ -1.49
PRPF4-203ENST00000488937 WNT11O96014 354 aa5.72□□□□□ -1.49
PRPF4-203ENST00000488937 SCTRP47872 440 aa5.72□□□□□ -1.49
PRPF4-203ENST00000488937 C20orf204Q6ZNR8 217 aa5.72□□□□□ -1.49
PRPF4-203ENST00000488937 TBC1D9Q6ZT07 1266 aa5.72□□□□□ -1.49
PRPF4-203ENST00000488937 PROCA1Q8NCQ7 364 aaPredicted RBP5.72□□□□□ -1.49
PRPF4-203ENST00000488937 RHBDD1Q8TEB9 315 aa5.72□□□□□ -1.49
PRPF4-203ENST00000488937 RAB6BQ9NRW1 208 aa5.72□□□□□ -1.49
PRPF4-203ENST00000488937 ARID3CA6NKF2 412 aa5.71□□□□□ -1.5
PRPF4-203ENST00000488937 APBB1O00213 710 aa5.71□□□□□ -1.5
PRPF4-203ENST00000488937 TGFB1P01137 390 aa5.71□□□□□ -1.5
PRPF4-203ENST00000488937 IL2RAP01589 272 aa5.71□□□□□ -1.5
PRPF4-203ENST00000488937 IREB2P48200 963 aaKnown RBP5.71□□□□□ -1.5
PRPF4-203ENST00000488937 INTS5Q6P9B9 1019 aaKnown RBP5.71□□□□□ -1.5
PRPF4-203ENST00000488937 TNFRSF25Q93038 417 aa5.71□□□□□ -1.5
PRPF4-203ENST00000488937 XAGE2Q96GT9 111 aa5.71□□□□□ -1.5
PRPF4-203ENST00000488937 ZIC5Q96T25 663 aa5.71□□□□□ -1.5
PRPF4-203ENST00000488937 FHDC1Q9C0D6 1143 aaPredicted RBP5.71□□□□□ -1.5
PRPF4-203ENST00000488937 FAM157BP0CG42 384 aa5.7□□□□□ -1.5
PRPF4-203ENST00000488937 NOS3P29474 1203 aa5.7□□□□□ -1.5
PRPF4-203ENST00000488937 DTX1Q86Y01 620 aa5.7□□□□□ -1.5
PRPF4-203ENST00000488937 MEGF10Q96KG7 1140 aa5.7□□□□□ -1.5
PRPF4-203ENST00000488937 PCMTD1Q96MG8 357 aaPredicted RBP5.7□□□□□ -1.5
PRPF4-203ENST00000488937 GSC2O15499 205 aa5.69□□□□□ -1.5
PRPF4-203ENST00000488937 LILRB5O75023 590 aa5.69□□□□□ -1.5
PRPF4-203ENST00000488937 FBXO45P0C2W1 286 aa5.69□□□□□ -1.5
PRPF4-203ENST00000488937 ZNF865P0CJ78 1059 aaPredicted RBP5.69□□□□□ -1.5
PRPF4-203ENST00000488937 FMR1NBQ8N0W7 255 aaPredicted RBP5.69□□□□□ -1.5
PRPF4-203ENST00000488937 MARK1Q9P0L2 795 aa5.69□□□□□ -1.5
PRPF4-203ENST00000488937 LOC105371045A0A1W2PR82 267 aa5.68□□□□□ -1.5
PRPF4-203ENST00000488937 PTCD1O75127 700 aaKnown RBP5.68□□□□□ -1.5
PRPF4-203ENST00000488937 GRIK1P39086 918 aa5.68□□□□□ -1.5
PRPF4-203ENST00000488937 NR1H3Q13133 447 aa5.68□□□□□ -1.5
PRPF4-203ENST00000488937 PPARGC1BQ86YN6 1023 aaKnown RBP5.68□□□□□ -1.5
PRPF4-203ENST00000488937 ATP4AP20648 1035 aa5.67□□□□□ -1.5
PRPF4-203ENST00000488937 RFC5P40937 340 aa5.67□□□□□ -1.5
PRPF4-203ENST00000488937 FLIIQ13045 1269 aa5.67□□□□□ -1.5
PRPF4-203ENST00000488937 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
PRPF4-203ENST00000488937 TMEM259Q4ZIN3 620 aa5.67□□□□□ -1.5
PRPF4-203ENST00000488937 TRAIPQ9BWF2 469 aa5.67□□□□□ -1.5
PRPF4-203ENST00000488937 TRIM34Q9BYJ4 488 aa5.67□□□□□ -1.5
PRPF4-203ENST00000488937 A6NJR5 290 aa5.66□□□□□ -1.5
PRPF4-203ENST00000488937 B8ZZF3 427 aa5.66□□□□□ -1.5
PRPF4-203ENST00000488937 TLR1Q15399 786 aa5.66□□□□□ -1.5
PRPF4-203ENST00000488937 NBPF1Q3BBV0 1214 aa5.66□□□□□ -1.5
PRPF4-203ENST00000488937 LILRA6Q6PI73 481 aa5.66□□□□□ -1.5
PRPF4-203ENST00000488937 STRN4Q9NRL3 753 aa5.66□□□□□ -1.5
PRPF4-203ENST00000488937 A0A1W2PNR3 127 aa5.65□□□□□ -1.5
PRPF4-203ENST00000488937 EFSO43281 561 aa5.65□□□□□ -1.5
PRPF4-203ENST00000488937 IGLV1-40P01703 118 aa5.65□□□□□ -1.5
PRPF4-203ENST00000488937 ADH7P40394 386 aa5.65□□□□□ -1.5
PRPF4-203ENST00000488937 PLA2G4AP47712 749 aa5.65□□□□□ -1.5
PRPF4-203ENST00000488937 DZIP1LQ8IYY4 767 aaKnown RBP5.65□□□□□ -1.5
PRPF4-203ENST00000488937 CCDC82Q8N4S0 544 aa5.65□□□□□ -1.5
PRPF4-203ENST00000488937 RGS22Q8NE09 1264 aa5.65□□□□□ -1.5
PRPF4-203ENST00000488937 JAG2Q9Y219 1238 aa5.65□□□□□ -1.5
PRPF4-203ENST00000488937 GJA3Q9Y6H8 435 aa5.65□□□□□ -1.5
PRPF4-203ENST00000488937 TATP17735 454 aaPredicted RBP5.64□□□□□ -1.51
PRPF4-203ENST00000488937 ILDR2Q71H61 639 aa5.64□□□□□ -1.51
PRPF4-203ENST00000488937 SIRT1Q96EB6 747 aa5.64□□□□□ -1.51
PRPF4-203ENST00000488937 NIFKQ9BYG3 293 aaKnown RBP5.64□□□□□ -1.51
PRPF4-203ENST00000488937 SOCS7O14512 581 aa5.63□□□□□ -1.51
PRPF4-203ENST00000488937 BUD31P41223 144 aaPredicted RBP5.63□□□□□ -1.51
PRPF4-203ENST00000488937 USP4Q13107 963 aa5.63□□□□□ -1.51
PRPF4-203ENST00000488937 ARSJQ5FYB0 599 aaPredicted RBP5.63□□□□□ -1.51
PRPF4-203ENST00000488937 SAMD5Q5TGI4 173 aa5.63□□□□□ -1.51
PRPF4-203ENST00000488937 ABI1Q8IZP0 508 aa5.63□□□□□ -1.51
PRPF4-203ENST00000488937 ZNF124Q15973 351 aa5.62□□□□□ -1.51
PRPF4-203ENST00000488937 ZDHHC13Q8IUH4 622 aa5.62□□□□□ -1.51
PRPF4-203ENST00000488937 BANK1Q8NDB2 785 aa5.62□□□□□ -1.51
PRPF4-203ENST00000488937 AIDAQ96BJ3 306 aa5.62□□□□□ -1.51
PRPF4-203ENST00000488937 JUNBP17275 347 aaPredicted RBP5.61□□□□□ -1.51
PRPF4-203ENST00000488937 ITGB5P18084 799 aa5.61□□□□□ -1.51
PRPF4-203ENST00000488937 KRTAP1-1Q07627 177 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms