RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 GRIN3BO60391 1043 aa16.65■□□□□ 0.26
PHF1-210ENST00000488767 ST5P78524 1137 aa16.65■□□□□ 0.26
PHF1-210ENST00000488767 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
PHF1-210ENST00000488767 MYH16Q9H6N6 1097 aa16.65■□□□□ 0.26
PHF1-210ENST00000488767 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
PHF1-210ENST00000488767 NBPF5PQ86XG9 351 aaPredicted RBP16.64■□□□□ 0.25
PHF1-210ENST00000488767 TSR2Q969E8 191 aaKnown RBP16.64■□□□□ 0.25
PHF1-210ENST00000488767 ZBTB3Q9H5J0 574 aa16.64■□□□□ 0.25
PHF1-210ENST00000488767 HYPKQ9NX55 129 aa16.64■□□□□ 0.25
PHF1-210ENST00000488767 CHPF2Q9P2E5 772 aa16.64■□□□□ 0.25
PHF1-210ENST00000488767 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
PHF1-210ENST00000488767 ELL2O00472 640 aaPredicted RBP16.63■□□□□ 0.25
PHF1-210ENST00000488767 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
PHF1-210ENST00000488767 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
PHF1-210ENST00000488767 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
PHF1-210ENST00000488767 AIMP1Q12904 312 aaKnown RBP16.62■□□□□ 0.25
PHF1-210ENST00000488767 PDIA6Q15084 440 aa16.62■□□□□ 0.25
PHF1-210ENST00000488767 HSP90AB3PQ58FF7 597 aa16.62■□□□□ 0.25
PHF1-210ENST00000488767 TPTE2Q6XPS3 522 aa16.62■□□□□ 0.25
PHF1-210ENST00000488767 STK31Q9BXU1 1019 aa16.62■□□□□ 0.25
PHF1-210ENST00000488767 NYXQ9GZU5 481 aa16.62■□□□□ 0.25
PHF1-210ENST00000488767 PDZRN3Q9UPQ7 1066 aa16.62■□□□□ 0.25
PHF1-210ENST00000488767 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
PHF1-210ENST00000488767 A0A0G2JLW4 131 aa16.61■□□□□ 0.25
PHF1-210ENST00000488767 PDE6BP35913 854 aa16.61■□□□□ 0.25
PHF1-210ENST00000488767 TTLL7Q6ZT98 887 aa16.61■□□□□ 0.25
PHF1-210ENST00000488767 COPS6Q7L5N1 327 aa16.61■□□□□ 0.25
PHF1-210ENST00000488767 BRIP1Q9BX63 1249 aa16.61■□□□□ 0.25
PHF1-210ENST00000488767 KIF13BQ9NQT8 1826 aa16.61■□□□□ 0.25
PHF1-210ENST00000488767 H0YIN7 160 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 ANXA1P04083 346 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 DPEP1P16444 411 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 HLFQ16534 295 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
PHF1-210ENST00000488767 GIGYF2Q6Y7W6 1299 aaKnown RBP16.6■□□□□ 0.25
PHF1-210ENST00000488767 MIER1Q8N108 512 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 C8orf58Q8NAV2 365 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 XAGE3Q8WTP9 111 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 FANCIQ9NVI1 1328 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 ATP10DQ9P241 1426 aa16.6■□□□□ 0.25
PHF1-210ENST00000488767 PRR5LQ6MZQ0 368 aa16.59■□□□□ 0.25
PHF1-210ENST00000488767 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
PHF1-210ENST00000488767 FAM177BA6PVY3 158 aa16.58■□□□□ 0.24
PHF1-210ENST00000488767 DDX58O95786 925 aaKnown RBP16.58■□□□□ 0.24
PHF1-210ENST00000488767 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
PHF1-210ENST00000488767 PPP1R42Q7Z4L9 355 aa16.58■□□□□ 0.24
PHF1-210ENST00000488767 C2CD5Q86YS7 1000 aa16.58■□□□□ 0.24
PHF1-210ENST00000488767 WWC3Q9ULE0 1092 aa16.58■□□□□ 0.24
PHF1-210ENST00000488767 ZNF521Q96K83 1311 aa16.58■□□□□ 0.24
PHF1-210ENST00000488767 NRXN2Q9P2S2 1712 aa16.58■□□□□ 0.24
PHF1-210ENST00000488767 YBX3P16989 372 aaKnown RBP eCLIP16.57■□□□□ 0.24
PHF1-210ENST00000488767 GPTP24298 496 aa16.57■□□□□ 0.24
PHF1-210ENST00000488767 DALRD3Q5D0E6 543 aaKnown RBP16.57■□□□□ 0.24
PHF1-210ENST00000488767 ANKRD13DQ6ZTN6 518 aa16.57■□□□□ 0.24
PHF1-210ENST00000488767 LRP10Q7Z4F1 713 aa16.57■□□□□ 0.24
PHF1-210ENST00000488767 PLBD2Q8NHP8 589 aa16.57■□□□□ 0.24
PHF1-210ENST00000488767 CHRNA5P30532 468 aa16.56■□□□□ 0.24
PHF1-210ENST00000488767 AFDNP55196 1824 aaKnown RBP16.56■□□□□ 0.24
PHF1-210ENST00000488767 IBTKQ9P2D0 1353 aaPredicted RBP16.55■□□□□ 0.24
PHF1-210ENST00000488767 E9PSI1 815 aa16.55■□□□□ 0.24
PHF1-210ENST00000488767 YY1P25490 414 aa16.55■□□□□ 0.24
PHF1-210ENST00000488767 RIC3Q7Z5B4 369 aa16.55■□□□□ 0.24
PHF1-210ENST00000488767 TSPYL6Q8N831 410 aa16.55■□□□□ 0.24
PHF1-210ENST00000488767 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
PHF1-210ENST00000488767 RNF123Q5XPI4 1314 aa16.54■□□□□ 0.24
PHF1-210ENST00000488767 EXOSC9Q06265 439 aaKnown RBP16.54■□□□□ 0.24
PHF1-210ENST00000488767 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
PHF1-210ENST00000488767 TTLL6Q8N841 843 aa16.54■□□□□ 0.24
PHF1-210ENST00000488767 ZNF622Q969S3 477 aaKnown RBP eCLIP16.54■□□□□ 0.244e-8■□□□□ 9.2
PHF1-210ENST00000488767 UTP14AQ9BVJ6 771 aaKnown RBP16.54■□□□□ 0.24
PHF1-210ENST00000488767 TCIRG1Q13488 830 aa16.53■□□□□ 0.24
PHF1-210ENST00000488767 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
PHF1-210ENST00000488767 NUP98P52948 1817 aa16.52■□□□□ 0.24
PHF1-210ENST00000488767 GOLGB1Q14789 3259 aaKnown RBP16.52■□□□□ 0.24
PHF1-210ENST00000488767 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
PHF1-210ENST00000488767 KCNA3P22001 575 aa16.52■□□□□ 0.24
PHF1-210ENST00000488767 CNKSR1Q969H4 720 aa16.52■□□□□ 0.24
PHF1-210ENST00000488767 MASTLQ96GX5 879 aa16.52■□□□□ 0.24
PHF1-210ENST00000488767 UBN2Q6ZU65 1347 aa16.51■□□□□ 0.23
PHF1-210ENST00000488767 KIAA1551Q9HCM1 1747 aa16.51■□□□□ 0.23
PHF1-210ENST00000488767 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
PHF1-210ENST00000488767 STYK1Q6J9G0 422 aa16.51■□□□□ 0.23
PHF1-210ENST00000488767 ARHGAP27Q6ZUM4 889 aa16.51■□□□□ 0.23
PHF1-210ENST00000488767 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
PHF1-210ENST00000488767 PHAXQ9H814 394 aaKnown RBP16.51■□□□□ 0.23
PHF1-210ENST00000488767 NPR1P16066 1061 aa16.5■□□□□ 0.23
PHF1-210ENST00000488767 NEXNQ0ZGT2 675 aa16.5■□□□□ 0.23
PHF1-210ENST00000488767 ERFEQ4G0M1 354 aa16.5■□□□□ 0.23
PHF1-210ENST00000488767 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
PHF1-210ENST00000488767 TRMT112Q9UI30 125 aaKnown RBP16.5■□□□□ 0.23
PHF1-210ENST00000488767 UTRNP46939 3433 aa16.5■□□□□ 0.23
PHF1-210ENST00000488767 TCERG1O14776 1098 aaKnown RBP16.49■□□□□ 0.23
PHF1-210ENST00000488767 VAMP4O75379 141 aa16.49■□□□□ 0.23
PHF1-210ENST00000488767 NTSR2O95665 410 aa16.49■□□□□ 0.23
PHF1-210ENST00000488767 SRGNP10124 158 aa16.49■□□□□ 0.23
PHF1-210ENST00000488767 HSP90B1P14625 803 aaKnown RBP16.49■□□□□ 0.23
PHF1-210ENST00000488767 NLRP10Q86W26 655 aa16.49■□□□□ 0.23
PHF1-210ENST00000488767 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms