RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 TIE1P35590 1138 aa9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 FLIIQ13045 1269 aa9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 FKBP5Q13451 457 aaPredicted RBP9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 FAM196AQ6ZSG2 479 aa9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 G2E3Q7L622 706 aa9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 CCDC125Q86Z20 511 aa9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 PPP4R2Q9NY27 417 aa9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 TNNQ9UQP3 1299 aa9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 COG6Q9Y2V7 657 aa9.6□□□□□ -0.87
APOBEC3A-203ENST00000488758 CACNA1FO60840 1977 aa9.59□□□□□ -0.87
APOBEC3A-203ENST00000488758 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
APOBEC3A-203ENST00000488758 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
APOBEC3A-203ENST00000488758 MYL6BP14649 208 aa9.59□□□□□ -0.87
APOBEC3A-203ENST00000488758 CHMP4BQ9H444 224 aaKnown RBP9.59□□□□□ -0.87
APOBEC3A-203ENST00000488758 PHAXQ9H814 394 aaKnown RBP9.59□□□□□ -0.87
APOBEC3A-203ENST00000488758 ERBB4Q15303 1308 aa9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 KCPQ6ZWJ8 1503 aa9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 DDX58O95786 925 aaKnown RBP9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 ANXA1P04083 346 aa9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 RLBP1P12271 317 aa9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 ATP6V1AP38606 617 aa9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 MVPQ14764 893 aaKnown RBP9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 ITPRIPQ8IWB1 547 aa9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 DNAJC10Q8IXB1 793 aa9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 TMEM57Q8N5G2 664 aa9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 DDX19BQ9UMR2 479 aa9.58□□□□□ -0.88
APOBEC3A-203ENST00000488758 PAPPAQ13219 1627 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 LOC102724428A0A0B4J2F2 783 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 A1BGP04217 495 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 SIK1P57059 783 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 AIMP1Q12904 312 aaKnown RBP9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 AAMPQ13685 434 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 PDIA6Q15084 440 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 SLC4A10Q6U841 1118 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 ZNF467Q7Z7K2 595 aaPredicted RBP9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 BCL11BQ9C0K0 894 aaPredicted RBP9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 PCDHB8Q9UN66 801 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 PALLDQ8WX93 1383 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 UBR2Q8IWV8 1755 aa9.57□□□□□ -0.88
APOBEC3A-203ENST00000488758 ABCC4O15439 1325 aa9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 C5P01031 1676 aa9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 TTLL13PA6NNM8 815 aa9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 F6X3S4 739 aa9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 PIP4K2AP48426 406 aaPredicted RBP9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 CCT4P50991 539 aaKnown RBP9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 PROSER3Q2NL68 480 aa9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 COPS6Q7L5N1 327 aa9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 NPM2Q86SE8 214 aaKnown RBP9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 PELP1Q8IZL8 1130 aaKnown RBP9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 CCDC136Q96JN2 1154 aa9.56□□□□□ -0.88
APOBEC3A-203ENST00000488758 PI4KAP2A4QPH2 592 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 NBPF26B4DH59 902 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 TRIM37O94972 964 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 CYP19A1P11511 503 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 SF3B2Q13435 895 aaKnown RBP9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 NBPF14Q5TI25 921 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 INTS3Q68E01 1043 aaKnown RBP9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 NBPF10Q6P3W6 841 aaKnown RBP9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 KSR2Q6VAB6 950 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 RIC3Q7Z5B4 369 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 NBPF15Q8N660 670 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 PI4KAP1Q8N8J0 262 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 XAGE3Q8WTP9 111 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 DNAAF4Q8WXU2 420 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 SLC4A9Q96Q91 983 aa9.55□□□□□ -0.88
APOBEC3A-203ENST00000488758 ANKRD13DQ6ZTN6 518 aa9.54□□□□□ -0.88
APOBEC3A-203ENST00000488758 ARXQ96QS3 562 aa9.54□□□□□ -0.88
APOBEC3A-203ENST00000488758 MAP3K2Q9Y2U5 619 aa9.54□□□□□ -0.88
APOBEC3A-203ENST00000488758 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
APOBEC3A-203ENST00000488758 LAMB4A4D0S4 1761 aa9.54□□□□□ -0.88
APOBEC3A-203ENST00000488758 NHSQ6T4R5 1651 aa9.54□□□□□ -0.88
APOBEC3A-203ENST00000488758 ZBTB7BO15156 539 aaPredicted RBP9.53□□□□□ -0.88
APOBEC3A-203ENST00000488758 HMGB2P26583 209 aaKnown RBP9.53□□□□□ -0.88
APOBEC3A-203ENST00000488758 NEXNQ0ZGT2 675 aa9.53□□□□□ -0.88
APOBEC3A-203ENST00000488758 B4GALNT3Q6L9W6 998 aa9.53□□□□□ -0.88
APOBEC3A-203ENST00000488758 PLBD2Q8NHP8 589 aa9.53□□□□□ -0.88
APOBEC3A-203ENST00000488758 SRCIN1Q9C0H9 1055 aa9.53□□□□□ -0.88
APOBEC3A-203ENST00000488758 CCNL1Q9UK58 526 aaPredicted RBP9.53□□□□□ -0.88
APOBEC3A-203ENST00000488758 BTAF1O14981 1849 aa9.52□□□□□ -0.89
APOBEC3A-203ENST00000488758 SBF2Q86WG5 1849 aa9.52□□□□□ -0.89
APOBEC3A-203ENST00000488758 IL6STP40189 918 aaPredicted RBP9.52□□□□□ -0.89
APOBEC3A-203ENST00000488758 CRKLP46109 303 aaKnown RBP9.52□□□□□ -0.89
APOBEC3A-203ENST00000488758 ITPK1Q13572 414 aa9.52□□□□□ -0.89
APOBEC3A-203ENST00000488758 KIF6Q6ZMV9 814 aa9.52□□□□□ -0.89
APOBEC3A-203ENST00000488758 LRP10Q7Z4F1 713 aa9.52□□□□□ -0.89
APOBEC3A-203ENST00000488758 TMEM106CQ9BVX2 250 aa9.52□□□□□ -0.89
APOBEC3A-203ENST00000488758 CCDC87Q9NVE4 849 aa9.52□□□□□ -0.89
APOBEC3A-203ENST00000488758 ADCY9O60503 1353 aa9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 TNS1Q9HBL0 1735 aaKnown RBP9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 ALDH1L1O75891 902 aa9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 APBA3O96018 575 aa9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 BEND3Q5T5X7 828 aa9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 INTS5Q6P9B9 1019 aaKnown RBP9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 TTLL7Q6ZT98 887 aa9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 SLC39A7Q92504 469 aa9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 METTL22Q9BUU2 404 aaPredicted RBP9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 ZBTB40Q9NUA8 1239 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms