RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ANKIB1Q9P2G1 1089 aa8.18□□□□□ -1.1
ITGB1-214ENST00000488427 PTCD1O75127 700 aaKnown RBP8.17□□□□□ -1.1
ITGB1-214ENST00000488427 NLRP8Q86W28 1048 aa8.17□□□□□ -1.1
ITGB1-214ENST00000488427 NUCKS1Q9H1E3 243 aaKnown RBP8.17□□□□□ -1.1
ITGB1-214ENST00000488427 CRISPLD1Q9H336 500 aa8.17□□□□□ -1.1
ITGB1-214ENST00000488427 MBIPQ9NS73 344 aa8.17□□□□□ -1.1
ITGB1-214ENST00000488427 EML1O00423 815 aa8.16□□□□□ -1.1
ITGB1-214ENST00000488427 RHPN1Q8TCX5 695 aa8.16□□□□□ -1.1
ITGB1-214ENST00000488427 COL26A1Q96A83 441 aa8.16□□□□□ -1.1
ITGB1-214ENST00000488427 ZNF837Q96EG3 531 aaPredicted RBP8.16□□□□□ -1.1
ITGB1-214ENST00000488427 C2orf49Q9BVC5 232 aaPredicted RBP8.16□□□□□ -1.1
ITGB1-214ENST00000488427 GPAMQ9HCL2 828 aa8.16□□□□□ -1.1
ITGB1-214ENST00000488427 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.1
ITGB1-214ENST00000488427 PRMT3O60678 531 aa8.15□□□□□ -1.1
ITGB1-214ENST00000488427 ATP2B4P23634 1241 aa8.15□□□□□ -1.1
ITGB1-214ENST00000488427 TBCELQ5QJ74 424 aa8.15□□□□□ -1.1
ITGB1-214ENST00000488427 POTEAQ6S8J7 498 aa8.15□□□□□ -1.1
ITGB1-214ENST00000488427 ZNF295-AS1Q8N0V1 137 aa8.15□□□□□ -1.1
ITGB1-214ENST00000488427 PODNQ7Z5L7 613 aa8.14□□□□□ -1.11
ITGB1-214ENST00000488427 CXXC1Q9P0U4 656 aaPredicted RBP8.14□□□□□ -1.11
ITGB1-214ENST00000488427 NSFL1CQ9UNZ2 370 aaKnown RBP8.14□□□□□ -1.11
ITGB1-214ENST00000488427 IGF1RP08069 1367 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 GPR25O00155 361 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 C21orf2O43822 256 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 FAM69CQ0P6D2 419 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 RTN1Q16799 776 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 NEDD1Q8NHV4 660 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 ZDHHC1Q8WTX9 485 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 PHACTR1Q9C0D0 580 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 PARP3Q9Y6F1 533 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 USP3Q9Y6I4 520 aa8.13□□□□□ -1.11
ITGB1-214ENST00000488427 ATP4AP20648 1035 aa8.12□□□□□ -1.11
ITGB1-214ENST00000488427 ALDH16A1Q8IZ83 802 aa8.12□□□□□ -1.11
ITGB1-214ENST00000488427 BEND7Q8N7W2 519 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-214ENST00000488427 PRIMPOLQ96LW4 560 aa8.12□□□□□ -1.11
ITGB1-214ENST00000488427 RUBCNLQ9H714 662 aa8.12□□□□□ -1.11
ITGB1-214ENST00000488427 A0A1W2PNR3 127 aa8.11□□□□□ -1.11
ITGB1-214ENST00000488427 MSTNO14793 375 aa8.11□□□□□ -1.11
ITGB1-214ENST00000488427 BCRP11274 1271 aa8.11□□□□□ -1.11
ITGB1-214ENST00000488427 DBN1Q16643 649 aa8.11□□□□□ -1.11
ITGB1-214ENST00000488427 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
ITGB1-214ENST00000488427 NGLY1Q96IV0 654 aa8.11□□□□□ -1.11
ITGB1-214ENST00000488427 CFHR5Q9BXR6 569 aa8.11□□□□□ -1.11
ITGB1-214ENST00000488427 HCN4Q9Y3Q4 1203 aa8.11□□□□□ -1.11
ITGB1-214ENST00000488427 CNTNAP5Q8WYK1 1306 aa8.1□□□□□ -1.11
ITGB1-214ENST00000488427 TMEM88BA6NKF7 163 aa8.1□□□□□ -1.11
ITGB1-214ENST00000488427 TXLNAP40222 546 aa8.1□□□□□ -1.11
ITGB1-214ENST00000488427 OCLNQ16625 522 aa8.1□□□□□ -1.11
ITGB1-214ENST00000488427 PLA2G4EQ3MJ16 856 aa8.1□□□□□ -1.11
ITGB1-214ENST00000488427 RETREG2Q8NC44 543 aa8.1□□□□□ -1.11
ITGB1-214ENST00000488427 ATXN7L1Q9ULK2 861 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-214ENST00000488427 PCDHGC4Q9Y5F7 938 aa8.1□□□□□ -1.11
ITGB1-214ENST00000488427 PATL2C9JE40 543 aaKnown RBP8.09□□□□□ -1.11
ITGB1-214ENST00000488427 IER5Q5VY09 327 aa8.09□□□□□ -1.11
ITGB1-214ENST00000488427 GTPBP3Q969Y2 492 aaKnown RBP8.09□□□□□ -1.11
ITGB1-214ENST00000488427 MYO19Q96H55 970 aa8.09□□□□□ -1.11
ITGB1-214ENST00000488427 DCAF5Q96JK2 942 aa8.09□□□□□ -1.11
ITGB1-214ENST00000488427 ZIC5Q96T25 663 aa8.09□□□□□ -1.11
ITGB1-214ENST00000488427 ATXN7O15265 892 aaPredicted RBP8.08□□□□□ -1.12
ITGB1-214ENST00000488427 EPB42P16452 691 aa8.08□□□□□ -1.12
ITGB1-214ENST00000488427 FKBP5Q13451 457 aaPredicted RBP8.08□□□□□ -1.12
ITGB1-214ENST00000488427 LAMC2Q13753 1193 aa8.08□□□□□ -1.12
ITGB1-214ENST00000488427 LGR5O75473 907 aa8.07□□□□□ -1.12
ITGB1-214ENST00000488427 FAM157BP0CG42 384 aa8.07□□□□□ -1.12
ITGB1-214ENST00000488427 MX2P20592 715 aa8.07□□□□□ -1.12
ITGB1-214ENST00000488427 NEUROD1Q13562 356 aa8.07□□□□□ -1.12
ITGB1-214ENST00000488427 C16orf46Q6P387 395 aa8.07□□□□□ -1.12
ITGB1-214ENST00000488427 ACDQ96AP0 544 aa8.07□□□□□ -1.12
ITGB1-214ENST00000488427 LRRC4BQ9NT99 713 aa8.07□□□□□ -1.12
ITGB1-214ENST00000488427 FAM13BQ9NYF5 915 aa8.07□□□□□ -1.12
ITGB1-214ENST00000488427 TGFBR3LH3BV60 316 aa8.06□□□□□ -1.12
ITGB1-214ENST00000488427 SSFA2P28290 1259 aa8.06□□□□□ -1.12
ITGB1-214ENST00000488427 C11orf91Q3C1V1 193 aa8.06□□□□□ -1.12
ITGB1-214ENST00000488427 LRRC69Q6ZNQ3 347 aa8.06□□□□□ -1.12
ITGB1-214ENST00000488427 SPOCK3Q9BQ16 436 aa8.06□□□□□ -1.12
ITGB1-214ENST00000488427 ZCCHC2Q9C0B9 1178 aaKnown RBP8.06□□□□□ -1.12
ITGB1-214ENST00000488427 BRD2P25440 801 aaKnown RBP8.05□□□□□ -1.12
ITGB1-214ENST00000488427 ARID4AP29374 1257 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-214ENST00000488427 MAP2K3P46734 347 aa8.05□□□□□ -1.12
ITGB1-214ENST00000488427 SH3PXD2AQ5TCZ1 1133 aa8.05□□□□□ -1.12
ITGB1-214ENST00000488427 ABTB2Q8N961 1025 aa8.05□□□□□ -1.12
ITGB1-214ENST00000488427 GALNT6Q8NCL4 622 aa8.05□□□□□ -1.12
ITGB1-214ENST00000488427 SUSD3Q96L08 255 aa8.05□□□□□ -1.12
ITGB1-214ENST00000488427 ADAM23O75077 832 aa8.04□□□□□ -1.12
ITGB1-214ENST00000488427 CEP63Q96MT8 703 aa8.04□□□□□ -1.12
ITGB1-214ENST00000488427 MKNK1Q9BUB5 465 aa8.04□□□□□ -1.12
ITGB1-214ENST00000488427 KHNYNO15037 678 aaKnown RBP8.03□□□□□ -1.12
ITGB1-214ENST00000488427 OIP5O43482 229 aa8.03□□□□□ -1.12
ITGB1-214ENST00000488427 BRD1O95696 1058 aa8.03□□□□□ -1.12
ITGB1-214ENST00000488427 FGFR3P22607 806 aa8.03□□□□□ -1.12
ITGB1-214ENST00000488427 DGKZQ13574 1117 aa8.03□□□□□ -1.12
ITGB1-214ENST00000488427 CCER1Q8TC90 406 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-214ENST00000488427 QTRT2Q9H974 415 aaKnown RBP8.03□□□□□ -1.12
ITGB1-214ENST00000488427 EFCC1Q9HA90 598 aa8.03□□□□□ -1.12
ITGB1-214ENST00000488427 PDIA4P13667 645 aaKnown RBP8.02□□□□□ -1.13
ITGB1-214ENST00000488427 FAM182BQ5T319 152 aa8.02□□□□□ -1.13
ITGB1-214ENST00000488427 C11orf16Q9NQ32 467 aa8.02□□□□□ -1.13
ITGB1-214ENST00000488427 MARK1Q9P0L2 795 aa8.02□□□□□ -1.13
ITGB1-214ENST00000488427 DCDC2BA2VCK2 349 aa8.01□□□□□ -1.13
ITGB1-214ENST00000488427 PROCP04070 461 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 1734.3 ms