RNA–Protein interactions for RNA: ENST00000488254.6

NOLC1-207, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NOLC1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-207ENST00000488254 HLFQ16534 295 aa12.87□□□□□ -0.35
NOLC1-207ENST00000488254 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
NOLC1-207ENST00000488254 ARHGAP45Q92619 1136 aa12.87□□□□□ -0.35
NOLC1-207ENST00000488254 API5Q9BZZ5 524 aaKnown RBP12.87□□□□□ -0.35
NOLC1-207ENST00000488254 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
NOLC1-207ENST00000488254 MVPQ14764 893 aaKnown RBP12.86□□□□□ -0.35
NOLC1-207ENST00000488254 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
NOLC1-207ENST00000488254 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
NOLC1-207ENST00000488254 DNAAF4Q8WXU2 420 aa12.86□□□□□ -0.35
NOLC1-207ENST00000488254 EIF5P55010 431 aaKnown RBP12.85□□□□□ -0.35
NOLC1-207ENST00000488254 ILDR2Q71H61 639 aa12.85□□□□□ -0.35
NOLC1-207ENST00000488254 MYD88Q99836 296 aa12.85□□□□□ -0.35
NOLC1-207ENST00000488254 PLSCR1O15162 318 aa12.84□□□□□ -0.35
NOLC1-207ENST00000488254 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
NOLC1-207ENST00000488254 SRP68Q9UHB9 627 aaKnown RBP12.84□□□□□ -0.35
NOLC1-207ENST00000488254 IL6STP40189 918 aaPredicted RBP12.84□□□□□ -0.35
NOLC1-207ENST00000488254 ZNF827Q17R98 1081 aa12.84□□□□□ -0.35
NOLC1-207ENST00000488254 CCDC136Q96JN2 1154 aa12.84□□□□□ -0.35
NOLC1-207ENST00000488254 MEIS3Q99687 375 aa12.84□□□□□ -0.35
NOLC1-207ENST00000488254 IGKV5-2P06315 115 aa12.83□□□□□ -0.35
NOLC1-207ENST00000488254 GPTP24298 496 aa12.83□□□□□ -0.35
NOLC1-207ENST00000488254 BEND3Q5T5X7 828 aa12.83□□□□□ -0.35
NOLC1-207ENST00000488254 AK7Q96M32 723 aa12.83□□□□□ -0.35
NOLC1-207ENST00000488254 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.35
NOLC1-207ENST00000488254 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
NOLC1-207ENST00000488254 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
NOLC1-207ENST00000488254 NPM2Q86SE8 214 aaKnown RBP12.83□□□□□ -0.36
NOLC1-207ENST00000488254 CAMKK2Q96RR4 588 aa12.83□□□□□ -0.36
NOLC1-207ENST00000488254 NOP58Q9Y2X3 529 aaKnown RBP12.83□□□□□ -0.36
NOLC1-207ENST00000488254 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
NOLC1-207ENST00000488254 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
NOLC1-207ENST00000488254 PLBD2Q8NHP8 589 aa12.82□□□□□ -0.36
NOLC1-207ENST00000488254 ANO8Q9HCE9 1232 aaPredicted RBP12.82□□□□□ -0.36
NOLC1-207ENST00000488254 COL15A1P39059 1388 aa12.82□□□□□ -0.36
NOLC1-207ENST00000488254 ARFGEF2Q9Y6D5 1785 aa12.82□□□□□ -0.36
NOLC1-207ENST00000488254 FAM177BA6PVY3 158 aa12.82□□□□□ -0.36
NOLC1-207ENST00000488254 ZBTB7BO15156 539 aaPredicted RBP12.82□□□□□ -0.36
NOLC1-207ENST00000488254 SLC27A3Q5K4L6 730 aa12.82□□□□□ -0.36
NOLC1-207ENST00000488254 INTS3Q68E01 1043 aaKnown RBP12.82□□□□□ -0.36
NOLC1-207ENST00000488254 KIF6Q6ZMV9 814 aa12.82□□□□□ -0.36
NOLC1-207ENST00000488254 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
NOLC1-207ENST00000488254 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
NOLC1-207ENST00000488254 CNTNAP4Q9C0A0 1308 aa12.82□□□□□ -0.36
NOLC1-207ENST00000488254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.81□□□□□ -0.36
NOLC1-207ENST00000488254 NBPF7P0C2Y1 421 aaPredicted RBP12.81□□□□□ -0.36
NOLC1-207ENST00000488254 METTL22Q9BUU2 404 aaPredicted RBP12.81□□□□□ -0.36
NOLC1-207ENST00000488254 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
NOLC1-207ENST00000488254 RPS6KA4O75676 772 aa12.81□□□□□ -0.36
NOLC1-207ENST00000488254 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
NOLC1-207ENST00000488254 SYNE4Q8N205 404 aa12.81□□□□□ -0.36
NOLC1-207ENST00000488254 MAP3K15Q6ZN16 1313 aa12.81□□□□□ -0.36
NOLC1-207ENST00000488254 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
NOLC1-207ENST00000488254 USPL1Q5W0Q7 1092 aa12.8□□□□□ -0.36
NOLC1-207ENST00000488254 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
NOLC1-207ENST00000488254 USP44Q9H0E7 712 aa12.8□□□□□ -0.36
NOLC1-207ENST00000488254 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
NOLC1-207ENST00000488254 PCDHB15Q9Y5E8 787 aa12.8□□□□□ -0.36
NOLC1-207ENST00000488254 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
NOLC1-207ENST00000488254 RC3H1Q5TC82 1133 aaKnown RBP12.8□□□□□ -0.36
NOLC1-207ENST00000488254 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
NOLC1-207ENST00000488254 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
NOLC1-207ENST00000488254 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
NOLC1-207ENST00000488254 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
NOLC1-207ENST00000488254 MS4A1P11836 297 aa12.79□□□□□ -0.36
NOLC1-207ENST00000488254 BAG6P46379 1132 aa12.79□□□□□ -0.36
NOLC1-207ENST00000488254 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
NOLC1-207ENST00000488254 ZBTB40Q9NUA8 1239 aa12.79□□□□□ -0.36
NOLC1-207ENST00000488254 RREB1Q92766 1687 aa12.79□□□□□ -0.36
NOLC1-207ENST00000488254 NUP98P52948 1817 aa12.79□□□□□ -0.36
NOLC1-207ENST00000488254 UBR3Q6ZT12 1888 aa12.79□□□□□ -0.36
NOLC1-207ENST00000488254 NEXNQ0ZGT2 675 aa12.78□□□□□ -0.36
NOLC1-207ENST00000488254 TRAPPC3LQ5T215 181 aa12.78□□□□□ -0.36
NOLC1-207ENST00000488254 GIGYF2Q6Y7W6 1299 aaKnown RBP12.78□□□□□ -0.36
NOLC1-207ENST00000488254 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.36
NOLC1-207ENST00000488254 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
NOLC1-207ENST00000488254 AFDNP55196 1824 aaKnown RBP12.78□□□□□ -0.36
NOLC1-207ENST00000488254 RFC4P35249 363 aa12.78□□□□□ -0.36
NOLC1-207ENST00000488254 LINS1Q8NG48 757 aa12.78□□□□□ -0.36
NOLC1-207ENST00000488254 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
NOLC1-207ENST00000488254 C9orf78Q9NZ63 289 aaPredicted RBP12.78□□□□□ -0.36
NOLC1-207ENST00000488254 UBN2Q6ZU65 1347 aa12.77□□□□□ -0.36
NOLC1-207ENST00000488254 TCIRG1Q13488 830 aa12.77□□□□□ -0.37
NOLC1-207ENST00000488254 UBE3BQ7Z3V4 1068 aa12.77□□□□□ -0.37
NOLC1-207ENST00000488254 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
NOLC1-207ENST00000488254 DEKP35659 375 aaKnown RBP12.77□□□□□ -0.37
NOLC1-207ENST00000488254 GCKRQ14397 625 aa12.77□□□□□ -0.37
NOLC1-207ENST00000488254 COL23A1Q86Y22 540 aaPredicted RBP12.77□□□□□ -0.37
NOLC1-207ENST00000488254 FAM89AQ96GI7 184 aa12.77□□□□□ -0.37
NOLC1-207ENST00000488254 LRRFIP2Q9Y608 721 aaKnown RBP12.77□□□□□ -0.37
NOLC1-207ENST00000488254 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
NOLC1-207ENST00000488254 A0A087WZG4 1122 aa12.76□□□□□ -0.37
NOLC1-207ENST00000488254 ZPR1O75312 459 aa12.76□□□□□ -0.37
NOLC1-207ENST00000488254 IGHDP01880 384 aa12.76□□□□□ -0.37
NOLC1-207ENST00000488254 TBC1D9BQ66K14 1250 aa12.76□□□□□ -0.37
NOLC1-207ENST00000488254 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
NOLC1-207ENST00000488254 IPO9Q96P70 1041 aaKnown RBP12.76□□□□□ -0.37
NOLC1-207ENST00000488254 C4AP0C0L4 1744 aa12.76□□□□□ -0.37
NOLC1-207ENST00000488254 MSL1Q68DK7 614 aa12.76□□□□□ -0.37
NOLC1-207ENST00000488254 NIP7Q9Y221 180 aaKnown RBP eCLIP12.76□□□□□ -0.37
NOLC1-207ENST00000488254 GRM8O00222 908 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms