RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.88
MCF2L2-212ENST00000488149 RTEL1-TNFRSF6BF6WH68 1400 aa9.52□□□□□ -0.88
MCF2L2-212ENST00000488149 BTBD11A6QL63 1104 aa9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 GNAT3A8MTJ3 354 aa9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 EBAG9O00559 213 aa9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 MYL6BP14649 208 aa9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 AFAP1Q8N556 730 aa9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 PYM1Q9BRP8 204 aaKnown RBP9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 RPRD2Q5VT52 1461 aaKnown RBP9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 GSTTP1A0A1W2PQM5 241 aa9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 TATP17735 454 aaPredicted RBP9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 TDRD12Q587J7 1177 aaKnown RBP9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 PCDHB15Q9Y5E8 787 aa9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 SPG7Q9UQ90 795 aa9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 OPA1O60313 960 aa9.52□□□□□ -0.89
MCF2L2-212ENST00000488149 PTPN23Q9H3S7 1636 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 MPHOSPH8Q99549 860 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 PIP4K2BP78356 416 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 MICALL1Q8N3F8 863 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 LARP6Q9BRS8 491 aaKnown RBP9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 ECHDC1Q9NTX5 307 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 AKAP2Q9Y2D5 859 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 GOLGA8BA8MQT2 603 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 RRS1Q15050 365 aaKnown RBP9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 IDH1O75874 414 aaKnown RBP9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 LIG1P18858 919 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 POTEJP0CG39 1038 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 SDSP20132 328 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 ARHGAP45Q92619 1136 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 TYRO3Q06418 890 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 CTAGE1Q96RT6 745 aa9.51□□□□□ -0.89
MCF2L2-212ENST00000488149 CCT2P78371 535 aaKnown RBP9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 GABPB1Q06547 395 aaPredicted RBP9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 TMEM132AQ24JP5 1023 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 FAM114A1Q8IWE2 563 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 DNA2P51530 1060 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 SLC52A1Q9NWF4 448 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 DACT1Q9NYF0 836 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 F13A1P00488 732 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 MTIF2P46199 727 aaKnown RBP9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 SSRP1Q08945 709 aaKnown RBP9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 CTAGE9A4FU28 777 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 NBPF11Q86T75 865 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 KCNG4Q8TDN1 519 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 DESP17661 470 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 CNKSR2Q8WXI2 1034 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 RAB34Q9BZG1 259 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 ZNF213O14771 459 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 SYT1P21579 422 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 LARP1Q6PKG0 1096 aaKnown RBP9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 SLC12A7Q9Y666 1083 aa9.5□□□□□ -0.89
MCF2L2-212ENST00000488149 GOLIM4O00461 696 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 SYKP43405 635 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 CABP4P57796 275 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 MCM10Q7L590 875 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 C10orf67Q8IYJ2 551 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 NEK1Q96PY6 1258 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 OTUD6BQ8N6M0 293 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 N4BP3O15049 544 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 IFIT1P09914 478 aaKnown RBP9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 PTGS1P23219 599 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 SSR1P43307 286 aaKnown RBP9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 MYRIPQ8NFW9 859 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 ERO1AQ96HE7 468 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 INTS4Q96HW7 963 aaKnown RBP9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 DNAJC25Q9H1X3 360 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 LRP2BPQ9P2M1 347 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 NAPBQ9H115 298 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 NSD2O96028 1365 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 IGSF3O75054 1194 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 CYLC1P35663 651 aaPredicted RBP9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 ATP2B2Q01814 1243 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 WWC2Q6AWC2 1192 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 NSRP1Q9H0G5 558 aaKnown RBP9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 C6orf163Q5TEZ5 329 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 VPS18Q9P253 973 aa9.49□□□□□ -0.89
MCF2L2-212ENST00000488149 FAM177BA6PVY3 158 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 F6X3S4 739 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 MRPS27Q92552 414 aaKnown RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 ORC3Q9UBD5 711 aaPredicted RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 MATR3P43243 847 aaKnown RBP eCLIP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 UBE4AQ14139 1066 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 IFI16Q16666 785 aaKnown RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 AOPEPQ8N6M6 819 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 ATRIPQ8WXE1 791 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 A0A1B0GUL7 405 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 TMCO5BA8MYB1 307 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 SPAG1Q07617 926 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 TXNDC2Q86VQ3 553 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 CTCFLQ8NI51 663 aaPredicted RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 ESYT1Q9BSJ8 1104 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 USP16Q9Y5T5 823 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 STAMBPO95630 424 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 ISM2Q6H9L7 571 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 ANKS4BQ8N8V4 417 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 MIS18AQ9NYP9 233 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms