RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 SH3PXD2AQ5TCZ1 1133 aa8.82□□□□□ -1
CCDC66-221ENST00000487739 LRRC69Q6ZNQ3 347 aa8.82□□□□□ -1
CCDC66-221ENST00000487739 TSEN2Q8NCE0 465 aaKnown RBP8.82□□□□□ -1
CCDC66-221ENST00000487739 RHPN1Q8TCX5 695 aa8.82□□□□□ -1
CCDC66-221ENST00000487739 MARK1Q9P0L2 795 aa8.82□□□□□ -1
CCDC66-221ENST00000487739 HCN2Q9UL51 889 aa8.82□□□□□ -1
CCDC66-221ENST00000487739 SFI1A8K8P3 1242 aa8.81□□□□□ -1
CCDC66-221ENST00000487739 HIRAP54198 1017 aaPredicted RBP8.81□□□□□ -1
CCDC66-221ENST00000487739 PRR12Q9ULL5 1215 aa8.81□□□□□ -1
CCDC66-221ENST00000487739 PIK3R2O00459 728 aa8.8□□□□□ -1
CCDC66-221ENST00000487739 DKK1O94907 266 aa8.8□□□□□ -1
CCDC66-221ENST00000487739 SEC13P55735 322 aa8.8□□□□□ -1
CCDC66-221ENST00000487739 ZNF468Q5VIY5 522 aaPredicted RBP8.8□□□□□ -1
CCDC66-221ENST00000487739 C1orf53Q5VUE5 145 aa8.8□□□□□ -1
CCDC66-221ENST00000487739 LARP1Q6PKG0 1096 aaKnown RBP8.8□□□□□ -1
CCDC66-221ENST00000487739 POTEAQ6S8J7 498 aa8.8□□□□□ -1
CCDC66-221ENST00000487739 PPP1R12CQ9BZL4 782 aa8.8□□□□□ -1
CCDC66-221ENST00000487739 STRN4Q9NRL3 753 aa8.8□□□□□ -1
CCDC66-221ENST00000487739 PPP1R12BO60237 982 aaPredicted RBP8.79□□□□□ -1
CCDC66-221ENST00000487739 ALYREFQ86V81 257 aaKnown RBP8.79□□□□□ -1
CCDC66-221ENST00000487739 C7orf43Q8WVR3 580 aa8.79□□□□□ -1
CCDC66-221ENST00000487739 BTBD6Q96KE9 485 aa8.79□□□□□ -1
CCDC66-221ENST00000487739 PLA2G4EQ3MJ16 856 aa8.78□□□□□ -1
CCDC66-221ENST00000487739 FCHSD1Q86WN1 690 aa8.78□□□□□ -1
CCDC66-221ENST00000487739 PHACTR1Q9C0D0 580 aa8.78□□□□□ -1
CCDC66-221ENST00000487739 ANKIB1Q9P2G1 1089 aa8.78□□□□□ -1
CCDC66-221ENST00000487739 KLF15Q9UIH9 416 aa8.78□□□□□ -1
CCDC66-221ENST00000487739 HCN4Q9Y3Q4 1203 aa8.78□□□□□ -1
CCDC66-221ENST00000487739 HOXB4P17483 251 aaPredicted RBP8.77□□□□□ -1.01
CCDC66-221ENST00000487739 PCBP4P57723 403 aaKnown RBP8.77□□□□□ -1.01
CCDC66-221ENST00000487739 GAS2L2Q8NHY3 880 aa8.77□□□□□ -1.01
CCDC66-221ENST00000487739 GNB5O14775 395 aa8.76□□□□□ -1.01
CCDC66-221ENST00000487739 C21orf2O43822 256 aa8.76□□□□□ -1.01
CCDC66-221ENST00000487739 DGKGP49619 791 aa8.76□□□□□ -1.01
CCDC66-221ENST00000487739 LINC00114Q6XXX2 140 aa8.76□□□□□ -1.01
CCDC66-221ENST00000487739 CHSY3Q70JA7 882 aa8.76□□□□□ -1.01
CCDC66-221ENST00000487739 STAG2Q8N3U4 1231 aa8.76□□□□□ -1.01
CCDC66-221ENST00000487739 ATAD2Q6PL18 1390 aa8.75□□□□□ -1.01
CCDC66-221ENST00000487739 MSTNO14793 375 aa8.75□□□□□ -1.01
CCDC66-221ENST00000487739 PTK7Q13308 1070 aa8.75□□□□□ -1.01
CCDC66-221ENST00000487739 CRTC2Q53ET0 693 aaPredicted RBP8.75□□□□□ -1.01
CCDC66-221ENST00000487739 KANK4Q5T7N3 995 aaPredicted RBP8.75□□□□□ -1.01
CCDC66-221ENST00000487739 SCG3Q8WXD2 468 aaKnown RBP8.75□□□□□ -1.01
CCDC66-221ENST00000487739 HSH2DQ96JZ2 352 aa8.75□□□□□ -1.01
CCDC66-221ENST00000487739 FAM196BA6NMK8 535 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L15C9J2P7 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L10C9JJH3 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L13C9JLJ4 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L12C9JPN9 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L11C9JVI0 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L21D6R901 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L18D6R9N7 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L22D6RA61 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L17D6RBQ6 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L19D6RCP7 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L20D6RJB6 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 LMOD1P29536 600 aaPredicted RBP8.74□□□□□ -1.01
CCDC66-221ENST00000487739 USP17L24Q0WX57 530 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 DPYDQ12882 1025 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 GRIN2CQ14957 1233 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 HIF1AQ16665 826 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 SYT9Q86SS6 491 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 CEP63Q96MT8 703 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 C2orf49Q9BVC5 232 aaPredicted RBP8.74□□□□□ -1.01
CCDC66-221ENST00000487739 VRTNQ9H8Y1 702 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 BRD7Q9NPI1 651 aa8.74□□□□□ -1.01
CCDC66-221ENST00000487739 NOP53Q9NZM5 478 aaKnown RBP8.74□□□□□ -1.01
CCDC66-221ENST00000487739 COL8A1P27658 744 aa8.73□□□□□ -1.01
CCDC66-221ENST00000487739 SFSWAPQ12872 951 aaKnown RBP8.73□□□□□ -1.01
CCDC66-221ENST00000487739 NEUROD1Q13562 356 aa8.73□□□□□ -1.01
CCDC66-221ENST00000487739 ALDH16A1Q8IZ83 802 aa8.73□□□□□ -1.01
CCDC66-221ENST00000487739 CHMP7Q8WUX9 453 aaPredicted RBP8.73□□□□□ -1.01
CCDC66-221ENST00000487739 SUSD3Q96L08 255 aa8.73□□□□□ -1.01
CCDC66-221ENST00000487739 HINFPQ9BQA5 517 aa8.73□□□□□ -1.01
CCDC66-221ENST00000487739 ELOA3CA0A087WX78 387 aaPredicted RBP8.72□□□□□ -1.01
CCDC66-221ENST00000487739 ELOA3DA6NLF2 546 aaPredicted RBP8.72□□□□□ -1.01
CCDC66-221ENST00000487739 SIN3BO75182 1162 aa8.72□□□□□ -1.01
CCDC66-221ENST00000487739 ITGB2P05107 769 aa8.72□□□□□ -1.01
CCDC66-221ENST00000487739 ALAS2P22557 587 aa8.72□□□□□ -1.01
CCDC66-221ENST00000487739 TYRO3Q06418 890 aa8.72□□□□□ -1.01
CCDC66-221ENST00000487739 SUZ12Q15022 739 aaKnown RBP8.72□□□□□ -1.01
CCDC66-221ENST00000487739 ELOA3BQ3SY89 546 aa8.72□□□□□ -1.01
CCDC66-221ENST00000487739 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
CCDC66-221ENST00000487739 ELOA3Q8NG57 546 aa8.72□□□□□ -1.01
CCDC66-221ENST00000487739 SPOCK3Q9BQ16 436 aa8.72□□□□□ -1.01
CCDC66-221ENST00000487739 SUV39H2Q9H5I1 410 aa8.72□□□□□ -1.01
CCDC66-221ENST00000487739 KRBA1A5PL33 1030 aa8.71□□□□□ -1.02
CCDC66-221ENST00000487739 KCNQ4P56696 695 aa8.71□□□□□ -1.02
CCDC66-221ENST00000487739 SPEM2Q0P670 501 aa8.71□□□□□ -1.02
CCDC66-221ENST00000487739 ZNF280CQ8ND82 737 aa8.71□□□□□ -1.02
CCDC66-221ENST00000487739 NGLY1Q96IV0 654 aa8.71□□□□□ -1.02
CCDC66-221ENST00000487739 IGFBP4P22692 258 aa8.7□□□□□ -1.02
CCDC66-221ENST00000487739 SLC30A3Q99726 388 aa8.7□□□□□ -1.02
CCDC66-221ENST00000487739 KCNH4Q9UQ05 1017 aa8.7□□□□□ -1.02
CCDC66-221ENST00000487739 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
CCDC66-221ENST00000487739 RTN1Q16799 776 aa8.69□□□□□ -1.02
CCDC66-221ENST00000487739 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
CCDC66-221ENST00000487739 MDFIQ99750 246 aa8.69□□□□□ -1.02
CCDC66-221ENST00000487739 ZNF777Q9ULD5 760 aaPredicted RBP8.69□□□□□ -1.02
CCDC66-221ENST00000487739 PROCP04070 461 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms