RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 C8orf86Q6ZUL3 223 aa7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 RAB44Q7Z6P3 723 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 SLC30A3Q99726 388 aa7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 MDFIQ99750 246 aa7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 NEUROD4Q9HD90 331 aa7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 ZNF358Q9NW07 568 aa7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 SCHIP1Q9P0W5 487 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 ZNF232Q9UNY5 417 aa7.9□□□□□ -1.14
HMGB1P36-201ENST00000487709 DYRK3O43781 588 aa7.89□□□□□ -1.15
HMGB1P36-201ENST00000487709 SIN3BO75182 1162 aa7.89□□□□□ -1.15
HMGB1P36-201ENST00000487709 ALBP02768 609 aa7.89□□□□□ -1.15
HMGB1P36-201ENST00000487709 GTF2IP78347 998 aa7.89□□□□□ -1.15
HMGB1P36-201ENST00000487709 SFSWAPQ12872 951 aaKnown RBP7.89□□□□□ -1.15
HMGB1P36-201ENST00000487709 KRTAP9-6A0A140TA67 174 aa7.88□□□□□ -1.15
HMGB1P36-201ENST00000487709 ADARB2-AS1A8MUL3 147 aa7.88□□□□□ -1.15
HMGB1P36-201ENST00000487709 SKIP12755 728 aa7.88□□□□□ -1.15
HMGB1P36-201ENST00000487709 NOS2P35228 1153 aa7.88□□□□□ -1.15
HMGB1P36-201ENST00000487709 SOX11P35716 441 aa7.88□□□□□ -1.15
HMGB1P36-201ENST00000487709 SLC9A9Q8IVB4 645 aa7.88□□□□□ -1.15
HMGB1P36-201ENST00000487709 NOD1Q9Y239 953 aa7.88□□□□□ -1.15
HMGB1P36-201ENST00000487709 STARD13Q9Y3M8 1113 aa7.88□□□□□ -1.15
HMGB1P36-201ENST00000487709 EML1O00423 815 aa7.87□□□□□ -1.15
HMGB1P36-201ENST00000487709 ADH7P40394 386 aa7.87□□□□□ -1.15
HMGB1P36-201ENST00000487709 TRIM28Q13263 835 aaKnown RBP7.87□□□□□ -1.15
HMGB1P36-201ENST00000487709 COL9A3Q14050 684 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P36-201ENST00000487709 TEAD4Q15561 434 aa7.87□□□□□ -1.15
HMGB1P36-201ENST00000487709 GRIK4Q16099 956 aa7.87□□□□□ -1.15
HMGB1P36-201ENST00000487709 SH3PXD2AQ5TCZ1 1133 aa7.87□□□□□ -1.15
HMGB1P36-201ENST00000487709 SPEM2Q0P670 501 aa7.86□□□□□ -1.15
HMGB1P36-201ENST00000487709 TNS4Q8IZW8 715 aa7.86□□□□□ -1.15
HMGB1P36-201ENST00000487709 MICALL1Q8N3F8 863 aa7.86□□□□□ -1.15
HMGB1P36-201ENST00000487709 RHPN1Q8TCX5 695 aa7.86□□□□□ -1.15
HMGB1P36-201ENST00000487709 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
HMGB1P36-201ENST00000487709 NEUROD1Q13562 356 aa7.85□□□□□ -1.15
HMGB1P36-201ENST00000487709 NCOA4Q13772 614 aa7.85□□□□□ -1.15
HMGB1P36-201ENST00000487709 PRSS36Q5K4E3 855 aa7.85□□□□□ -1.15
HMGB1P36-201ENST00000487709 TNFRSF25Q93038 417 aa7.85□□□□□ -1.15
HMGB1P36-201ENST00000487709 SERTM1A2A2V5 107 aa7.84□□□□□ -1.15
HMGB1P36-201ENST00000487709 NID1P14543 1247 aa7.84□□□□□ -1.15
HMGB1P36-201ENST00000487709 EPHA4P54764 986 aa7.84□□□□□ -1.15
HMGB1P36-201ENST00000487709 TBC1D8BQ0IIM8 1120 aa7.84□□□□□ -1.15
HMGB1P36-201ENST00000487709 DEPDC4Q8N2C3 294 aa7.84□□□□□ -1.15
HMGB1P36-201ENST00000487709 HSH2DQ96JZ2 352 aa7.84□□□□□ -1.15
HMGB1P36-201ENST00000487709 CEP63Q96MT8 703 aa7.84□□□□□ -1.15
HMGB1P36-201ENST00000487709 ZFP64Q9NPA5 681 aa7.84□□□□□ -1.15
HMGB1P36-201ENST00000487709 TMEM132AQ24JP5 1023 aa7.83□□□□□ -1.16
HMGB1P36-201ENST00000487709 TRAPPC3LQ5T215 181 aa7.83□□□□□ -1.16
HMGB1P36-201ENST00000487709 ARTNQ5T4W7 220 aa7.83□□□□□ -1.16
HMGB1P36-201ENST00000487709 BRD7Q9NPI1 651 aa7.83□□□□□ -1.16
HMGB1P36-201ENST00000487709 PRDM6Q9NQX0 595 aa7.83□□□□□ -1.16
HMGB1P36-201ENST00000487709 C7orf43Q8WVR3 580 aa7.82□□□□□ -1.16
HMGB1P36-201ENST00000487709 GPC6Q9Y625 555 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P36-201ENST00000487709 MCM6Q14566 821 aa7.81□□□□□ -1.16
HMGB1P36-201ENST00000487709 NBPF11Q86T75 865 aa7.81□□□□□ -1.16
HMGB1P36-201ENST00000487709 HCN4Q9Y3Q4 1203 aa7.81□□□□□ -1.16
HMGB1P36-201ENST00000487709 SFI1A8K8P3 1242 aa7.8□□□□□ -1.16
HMGB1P36-201ENST00000487709 USP17L5A8MUK1 530 aa7.8□□□□□ -1.16
HMGB1P36-201ENST00000487709 C20orf204Q6ZNR8 217 aa7.8□□□□□ -1.16
HMGB1P36-201ENST00000487709 TPCN2Q8NHX9 752 aa7.8□□□□□ -1.16
HMGB1P36-201ENST00000487709 BHMTQ93088 406 aa7.8□□□□□ -1.16
HMGB1P36-201ENST00000487709 IGFLR1Q9H665 355 aa7.8□□□□□ -1.16
HMGB1P36-201ENST00000487709 LZTS3O60299 673 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P36-201ENST00000487709 LILRB5O75023 590 aa7.79□□□□□ -1.16
HMGB1P36-201ENST00000487709 PSMA6P60900 246 aaKnown RBP7.79□□□□□ -1.16
HMGB1P36-201ENST00000487709 MBTPS1Q14703 1052 aa7.79□□□□□ -1.16
HMGB1P36-201ENST00000487709 UBE2OQ9C0C9 1292 aaKnown RBP7.79□□□□□ -1.16
HMGB1P36-201ENST00000487709 PHACTR1Q9C0D0 580 aa7.79□□□□□ -1.16
HMGB1P36-201ENST00000487709 TSPAN10Q9H1Z9 355 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P36-201ENST00000487709 KIAA1024Q9UPX6 916 aa7.79□□□□□ -1.16
HMGB1P36-201ENST00000487709 KCNH4Q9UQ05 1017 aa7.79□□□□□ -1.16
HMGB1P36-201ENST00000487709 A0A0A0MRY4 1105 aa7.78□□□□□ -1.16
HMGB1P36-201ENST00000487709 C9orf172C9J069 976 aa7.78□□□□□ -1.16
HMGB1P36-201ENST00000487709 SELPP16109 830 aa7.78□□□□□ -1.16
HMGB1P36-201ENST00000487709 TYRO3Q06418 890 aa7.78□□□□□ -1.16
HMGB1P36-201ENST00000487709 NFATC2IPQ8NCF5 419 aa7.78□□□□□ -1.16
HMGB1P36-201ENST00000487709 ZNF280CQ8ND82 737 aa7.78□□□□□ -1.16
HMGB1P36-201ENST00000487709 CHMP3Q9Y3E7 222 aa7.78□□□□□ -1.16
HMGB1P36-201ENST00000487709 ADGRE1Q14246 886 aa7.77□□□□□ -1.17
HMGB1P36-201ENST00000487709 SHISA2Q6UWI4 295 aa7.77□□□□□ -1.17
HMGB1P36-201ENST00000487709 KRTAP1-3Q8IUG1 177 aa7.77□□□□□ -1.17
HMGB1P36-201ENST00000487709 NUDT8Q8WV74 236 aa7.77□□□□□ -1.17
HMGB1P36-201ENST00000487709 ALG2Q9H553 416 aa7.77□□□□□ -1.17
HMGB1P36-201ENST00000487709 JPH1Q9HDC5 661 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P36-201ENST00000487709 ANKIB1Q9P2G1 1089 aa7.77□□□□□ -1.17
HMGB1P36-201ENST00000487709 SLC6A14Q9UN76 642 aa7.77□□□□□ -1.17
HMGB1P36-201ENST00000487709 COG6Q9Y2V7 657 aa7.77□□□□□ -1.17
HMGB1P36-201ENST00000487709 ELNP15502 786 aa7.76□□□□□ -1.17
HMGB1P36-201ENST00000487709 RAC1P63000 192 aa7.76□□□□□ -1.17
HMGB1P36-201ENST00000487709 C1orf53Q5VUE5 145 aa7.76□□□□□ -1.17
HMGB1P36-201ENST00000487709 TXNRD3Q86VQ6 643 aa7.76□□□□□ -1.17
HMGB1P36-201ENST00000487709 TRIM50Q86XT4 487 aa7.76□□□□□ -1.17
HMGB1P36-201ENST00000487709 SUSD3Q96L08 255 aa7.76□□□□□ -1.17
HMGB1P36-201ENST00000487709 H2AFB1P0C5Y9 115 aa7.75□□□□□ -1.17
HMGB1P36-201ENST00000487709 H2AFB2P0C5Z0 115 aa7.75□□□□□ -1.17
HMGB1P36-201ENST00000487709 KCNQ4P56696 695 aa7.75□□□□□ -1.17
HMGB1P36-201ENST00000487709 CCDC102BQ68D86 513 aa7.75□□□□□ -1.17
HMGB1P36-201ENST00000487709 TP53INP1Q96A56 240 aa7.75□□□□□ -1.17
HMGB1P36-201ENST00000487709 CLDN10P78369 228 aa7.74□□□□□ -1.17
HMGB1P36-201ENST00000487709 LRP8Q14114 963 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms