RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 TTC31Q49AM3 519 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-209ENST00000487676 RALYLQ86SE5 291 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-209ENST00000487676 DDX41Q9UJV9 622 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-209ENST00000487676 ZFP91Q96JP5 570 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-209ENST00000487676 KIF5CO60282 957 aa17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 CYP2E1P05181 493 aaPredicted RBP17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 SAFBQ15424 915 aaKnown RBP eCLIP17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 AOPEPQ8N6M6 819 aa17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 SLC3A2P08195 630 aaKnown RBP17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 KIF4BQ2VIQ3 1234 aa17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 VPS53Q5VIR6 699 aa17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 MIS18AQ9NYP9 233 aa17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 ABCC4O15439 1325 aa17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 EPB41L2O43491 1005 aaKnown RBP17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 NCBP1Q09161 790 aaKnown RBP17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 RASSF8Q8NHQ8 419 aa17.79■□□□□ 0.44
HLA-DQB1-209ENST00000487676 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 ATP8B2P98198 1209 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 CRACR2AQ9BSW2 395 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 CLSTN2Q9H4D0 955 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 A0A1B0GUL7 405 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 CDR1P51861 262 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 RSPH14Q9UHP6 348 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 KIF24Q5T7B8 1368 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 FLIIQ13045 1269 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 MAP9Q49MG5 647 aa17.78■□□□□ 0.44
HLA-DQB1-209ENST00000487676 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.44
HLA-DQB1-209ENST00000487676 TRAPPC8Q9Y2L5 1435 aa17.77■□□□□ 0.44
HLA-DQB1-209ENST00000487676 MCM6Q14566 821 aa17.77■□□□□ 0.44
HLA-DQB1-209ENST00000487676 KIAA0556O60303 1618 aa17.77■□□□□ 0.44
HLA-DQB1-209ENST00000487676 GIMAP7Q8NHV1 300 aa17.77■□□□□ 0.44
HLA-DQB1-209ENST00000487676 DNAAF4Q8WXU2 420 aa17.77■□□□□ 0.44
HLA-DQB1-209ENST00000487676 ECHDC1Q9NTX5 307 aa17.77■□□□□ 0.44
HLA-DQB1-209ENST00000487676 PTPRTO14522 1441 aa17.77■□□□□ 0.44
HLA-DQB1-209ENST00000487676 ATP10BO94823 1461 aa17.77■□□□□ 0.43
HLA-DQB1-209ENST00000487676 SHTN1A0MZ66 631 aa17.77■□□□□ 0.43
HLA-DQB1-209ENST00000487676 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.43
HLA-DQB1-209ENST00000487676 EVI5LQ96CN4 794 aa17.76■□□□□ 0.43
HLA-DQB1-209ENST00000487676 BRPF1P55201 1214 aaPredicted RBP17.76■□□□□ 0.43
HLA-DQB1-209ENST00000487676 SMARCC1Q92922 1105 aaPredicted RBP17.76■□□□□ 0.43
HLA-DQB1-209ENST00000487676 USP16Q9Y5T5 823 aa17.76■□□□□ 0.43
HLA-DQB1-209ENST00000487676 BIN1O00499 593 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 EVCP57679 992 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 CTNNA3Q9UI47 895 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 NLRP1Q9C000 1473 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 MCM3P25205 808 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 LMOD2Q6P5Q4 547 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 CCDC12Q8WUD4 166 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 ZDHHC9Q9Y397 364 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 MNAT1P51948 309 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 ZSCAN26Q16670 478 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 GOLGA1Q92805 767 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 PHACTR3Q96KR7 559 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 SIL1Q9H173 461 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 HSPA4P34932 840 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 TOMM22Q9NS69 142 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 PALD1Q9ULE6 856 aa17.75■□□□□ 0.43
HLA-DQB1-209ENST00000487676 RGS12O14924 1447 aa17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 RAD50Q92878 1312 aa17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 ERCC6LQ2NKX8 1250 aa17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 ZSWIM4Q9H7M6 989 aa17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 AKAP17AQ02040 695 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 PPP1R42Q7Z4L9 355 aa17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 PCMTD1Q96MG8 357 aaPredicted RBP17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 SNX14Q9Y5W7 946 aa17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 TMX1Q9H3N1 280 aa17.74■□□□□ 0.43
HLA-DQB1-209ENST00000487676 SSH2Q76I76 1423 aa17.73■□□□□ 0.43
HLA-DQB1-209ENST00000487676 HMG20BQ9P0W2 317 aa17.73■□□□□ 0.43
HLA-DQB1-209ENST00000487676 KDM5AP29375 1690 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-209ENST00000487676 UBASH3AP57075 661 aa17.73■□□□□ 0.43
HLA-DQB1-209ENST00000487676 RBM8AQ9Y5S9 174 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-209ENST00000487676 ELP1O95163 1332 aa17.73■□□□□ 0.43
HLA-DQB1-209ENST00000487676 VPS18Q9P253 973 aa17.73■□□□□ 0.43
HLA-DQB1-209ENST00000487676 RTEL1-TNFRSF6BF6WH68 1400 aa17.73■□□□□ 0.43
HLA-DQB1-209ENST00000487676 SYCP2Q9BX26 1530 aa17.73■□□□□ 0.43
HLA-DQB1-209ENST00000487676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 MSH6P52701 1360 aa17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 NFXL1Q6ZNB6 911 aa17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 LRRC8AQ8IWT6 810 aa17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 ZNF710Q8N1W2 664 aa17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 IFNKQ9P0W0 207 aa17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 IMPACTQ9P2X3 320 aa17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 ANKRD7Q92527 254 aa17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 MRPS27Q92552 414 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 SLC52A1Q9NWF4 448 aa17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 MORC2Q9Y6X9 1032 aaPredicted RBP17.72■□□□□ 0.43
HLA-DQB1-209ENST00000487676 C1orf141Q5JVX7 400 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 TMEM87AQ8NBN3 555 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 CCDC148Q8NFR7 591 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 BRF1Q92994 677 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 OAS2P29728 719 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 PIP4K2AP48426 406 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 GUCY1B3Q02153 619 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 HSP90AB3PQ58FF7 597 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 FAM173BQ6P4H8 233 aa17.71■□□□□ 0.43
HLA-DQB1-209ENST00000487676 NEUROD6Q96NK8 337 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms