RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CNTNAP3BQ96NU0 1288 aa8.22□□□□□ -1.09
LINC00888-204ENST00000487386 TRERF1Q96PN7 1200 aa8.22□□□□□ -1.09
LINC00888-204ENST00000487386 CNTNAP3Q9BZ76 1288 aa8.22□□□□□ -1.09
LINC00888-204ENST00000487386 HCN2Q9UL51 889 aa8.22□□□□□ -1.09
LINC00888-204ENST00000487386 RTN1Q16799 776 aa8.21□□□□□ -1.1
LINC00888-204ENST00000487386 COL26A1Q96A83 441 aa8.21□□□□□ -1.1
LINC00888-204ENST00000487386 ATXN7L1Q9ULK2 861 aaPredicted RBP8.21□□□□□ -1.1
LINC00888-204ENST00000487386 ATXN7O15265 892 aaPredicted RBP8.2□□□□□ -1.1
LINC00888-204ENST00000487386 TNP2Q05952 138 aa8.2□□□□□ -1.1
LINC00888-204ENST00000487386 LRRC69Q6ZNQ3 347 aa8.2□□□□□ -1.1
LINC00888-204ENST00000487386 ABHD17AQ96GS6 310 aa8.2□□□□□ -1.1
LINC00888-204ENST00000487386 MYO19Q96H55 970 aa8.2□□□□□ -1.1
LINC00888-204ENST00000487386 NGLY1Q96IV0 654 aa8.2□□□□□ -1.1
LINC00888-204ENST00000487386 SUSD3Q96L08 255 aa8.2□□□□□ -1.1
LINC00888-204ENST00000487386 QTRT2Q9H974 415 aaKnown RBP8.2□□□□□ -1.1
LINC00888-204ENST00000487386 MBIPQ9NS73 344 aa8.2□□□□□ -1.1
LINC00888-204ENST00000487386 PHF24Q9UPV7 400 aa8.2□□□□□ -1.1
LINC00888-204ENST00000487386 FAM157BP0CG42 384 aa8.19□□□□□ -1.1
LINC00888-204ENST00000487386 SLURP2P0DP57 97 aa8.19□□□□□ -1.1
LINC00888-204ENST00000487386 ZNF280CQ8ND82 737 aa8.19□□□□□ -1.1
LINC00888-204ENST00000487386 ANKIB1Q9P2G1 1089 aa8.19□□□□□ -1.1
LINC00888-204ENST00000487386 EFSO43281 561 aa8.18□□□□□ -1.1
LINC00888-204ENST00000487386 MAPTP10636 758 aaKnown RBP8.18□□□□□ -1.1
LINC00888-204ENST00000487386 ATP2B4P23634 1241 aa8.18□□□□□ -1.1
LINC00888-204ENST00000487386 SRSF11Q05519 484 aaKnown RBP8.18□□□□□ -1.1
LINC00888-204ENST00000487386 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
LINC00888-204ENST00000487386 HSH2DQ96JZ2 352 aa8.18□□□□□ -1.1
LINC00888-204ENST00000487386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC00888-204ENST00000487386 BCS1LQ9Y276 419 aa8.18□□□□□ -1.1
LINC00888-204ENST00000487386 USTQ9Y2C2 406 aa8.18□□□□□ -1.1
LINC00888-204ENST00000487386 GJA3Q9Y6H8 435 aa8.18□□□□□ -1.1
LINC00888-204ENST00000487386 CARNS1A5YM72 827 aa8.17□□□□□ -1.1
LINC00888-204ENST00000487386 SSFA2P28290 1259 aa8.17□□□□□ -1.1
LINC00888-204ENST00000487386 INSM1Q01101 510 aaPredicted RBP8.17□□□□□ -1.1
LINC00888-204ENST00000487386 CAPN12Q6ZSI9 719 aa8.17□□□□□ -1.1
LINC00888-204ENST00000487386 NEUROD4Q9HD90 331 aa8.17□□□□□ -1.1
LINC00888-204ENST00000487386 LRFN2Q9ULH4 789 aa8.17□□□□□ -1.1
LINC00888-204ENST00000487386 C2CD2LO14523 706 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 IGF1RP08069 1367 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 MX2P20592 715 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 FGFR3P22607 806 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 CTBSQ01459 385 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 LAMC2Q13753 1193 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 HIF1AQ16665 826 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 COX20Q5RI15 118 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 FAM182BQ5T319 152 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 IER5Q5VY09 327 aa8.16□□□□□ -1.1
LINC00888-204ENST00000487386 DMGDHQ9UI17 866 aaKnown RBP8.16□□□□□ -1.1
LINC00888-204ENST00000487386 DCDC2BA2VCK2 349 aa8.15□□□□□ -1.1
LINC00888-204ENST00000487386 KHNYNO15037 678 aaKnown RBP8.15□□□□□ -1.1
LINC00888-204ENST00000487386 PTCD1O75127 700 aaKnown RBP8.15□□□□□ -1.1
LINC00888-204ENST00000487386 ADAMTS2O95450 1211 aa8.15□□□□□ -1.1
LINC00888-204ENST00000487386 C11orf91Q3C1V1 193 aa8.15□□□□□ -1.1
LINC00888-204ENST00000487386 PHLDB3Q6NSJ2 640 aa8.15□□□□□ -1.1
LINC00888-204ENST00000487386 STRN4Q9NRL3 753 aa8.15□□□□□ -1.1
LINC00888-204ENST00000487386 KLK14Q9P0G3 267 aa8.15□□□□□ -1.1
LINC00888-204ENST00000487386 LOC100996750A0A140TA64 210 aa8.14□□□□□ -1.11
LINC00888-204ENST00000487386 TGFBR3LH3BV60 316 aa8.14□□□□□ -1.11
LINC00888-204ENST00000487386 TYRO3Q06418 890 aa8.14□□□□□ -1.11
LINC00888-204ENST00000487386 DGKZQ13574 1117 aa8.14□□□□□ -1.11
LINC00888-204ENST00000487386 BTLAQ7Z6A9 289 aa8.14□□□□□ -1.11
LINC00888-204ENST00000487386 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
LINC00888-204ENST00000487386 RETREG2Q8NC44 543 aa8.14□□□□□ -1.11
LINC00888-204ENST00000487386 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
LINC00888-204ENST00000487386 SAP130Q9H0E3 1048 aa8.14□□□□□ -1.11
LINC00888-204ENST00000487386 MAP2K3P46734 347 aa8.13□□□□□ -1.11
LINC00888-204ENST00000487386 KCNQ4P56696 695 aa8.13□□□□□ -1.11
LINC00888-204ENST00000487386 MKNK1Q9BUB5 465 aa8.13□□□□□ -1.11
LINC00888-204ENST00000487386 MARK1Q9P0L2 795 aa8.13□□□□□ -1.11
LINC00888-204ENST00000487386 NSFL1CQ9UNZ2 370 aaKnown RBP8.13□□□□□ -1.11
LINC00888-204ENST00000487386 CD33P20138 364 aa8.12□□□□□ -1.11
LINC00888-204ENST00000487386 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
LINC00888-204ENST00000487386 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
LINC00888-204ENST00000487386 C16orf46Q6P387 395 aa8.12□□□□□ -1.11
LINC00888-204ENST00000487386 WHAMMQ8TF30 809 aa8.12□□□□□ -1.11
LINC00888-204ENST00000487386 CEP63Q96MT8 703 aa8.12□□□□□ -1.11
LINC00888-204ENST00000487386 TNFRSF10BO14763 440 aa8.11□□□□□ -1.11
LINC00888-204ENST00000487386 BMP4P12644 408 aa8.11□□□□□ -1.11
LINC00888-204ENST00000487386 SCNN1AP37088 669 aa8.11□□□□□ -1.11
LINC00888-204ENST00000487386 NAA30Q147X3 362 aaPredicted RBP8.11□□□□□ -1.11
LINC00888-204ENST00000487386 LYPD4Q6UWN0 246 aa8.11□□□□□ -1.11
LINC00888-204ENST00000487386 ACDQ96AP0 544 aa8.11□□□□□ -1.11
LINC00888-204ENST00000487386 BRD7Q9NPI1 651 aa8.11□□□□□ -1.11
LINC00888-204ENST00000487386 SEPT3Q9UH03 358 aa8.11□□□□□ -1.11
LINC00888-204ENST00000487386 INPP5BP32019 993 aa8.1□□□□□ -1.11
LINC00888-204ENST00000487386 GRIN2CQ14957 1233 aa8.1□□□□□ -1.11
LINC00888-204ENST00000487386 FAM26DQ5JW98 314 aa8.1□□□□□ -1.11
LINC00888-204ENST00000487386 IFT43Q96FT9 208 aa8.1□□□□□ -1.11
LINC00888-204ENST00000487386 KCNH4Q9UQ05 1017 aa8.1□□□□□ -1.11
LINC00888-204ENST00000487386 OPLAHO14841 1288 aa8.09□□□□□ -1.11
LINC00888-204ENST00000487386 MICAL2O94851 1124 aa8.09□□□□□ -1.11
LINC00888-204ENST00000487386 CELA2BP08218 269 aaPredicted RBP8.09□□□□□ -1.11
LINC00888-204ENST00000487386 GRNP28799 593 aaKnown RBP8.09□□□□□ -1.11
LINC00888-204ENST00000487386 PDE4CQ08493 712 aa8.09□□□□□ -1.11
LINC00888-204ENST00000487386 ARHGEF15O94989 841 aa8.08□□□□□ -1.12
LINC00888-204ENST00000487386 ARAFP10398 606 aa8.08□□□□□ -1.12
LINC00888-204ENST00000487386 BRD2P25440 801 aaKnown RBP8.08□□□□□ -1.12
LINC00888-204ENST00000487386 IDH3AP50213 366 aa8.08□□□□□ -1.12
LINC00888-204ENST00000487386 ETFBKMTQ8IXQ9 262 aa8.08□□□□□ -1.12
LINC00888-204ENST00000487386 OXCT2Q9BYC2 517 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms