RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 HYPKQ9NX55 129 aa14.87□□□□□ -0.03
TMEM39B-208ENST00000487305 CHD2O14647 1828 aaKnown RBP14.87□□□□□ -0.03
TMEM39B-208ENST00000487305 DDX58O95786 925 aaKnown RBP14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 PDCP20941 246 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 AK2P54819 239 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 ANKRD1Q15327 319 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 KSR2Q6VAB6 950 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 ALDH8A1Q9H2A2 487 aaPredicted RBP14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 ZSWIM6Q9HCJ5 1215 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 CYP46A1Q9Y6A2 500 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 FER1L4A9Z1Z3 1794 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 PLEKHG2Q9H7P9 1386 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 HEG1Q9ULI3 1381 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 UTYO14607 1347 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 BTBD11A6QL63 1104 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 F13A1P00488 732 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 NBPF7P0C2Y1 421 aaPredicted RBP14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 CHPF2Q9P2E5 772 aa14.86□□□□□ -0.03
TMEM39B-208ENST00000487305 PTMAP06454 111 aaKnown RBP14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 IFIT2P09913 472 aaKnown RBP14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 KCNA6P17658 529 aa14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 SYT1P21579 422 aa14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 KIAA2012Q0VF49 1180 aa14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 ADCY9O60503 1353 aa14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 CCDC171Q6TFL3 1326 aa14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 DYNC1I1O14576 645 aa14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 RNF20Q5VTR2 975 aa14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 TICAM2Q86XR7 235 aa14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 C9orf78Q9NZ63 289 aaPredicted RBP14.85□□□□□ -0.03
TMEM39B-208ENST00000487305 EIF2S2P20042 333 aaKnown RBP14.84□□□□□ -0.03
TMEM39B-208ENST00000487305 C1orf141Q5JVX7 400 aa14.84□□□□□ -0.03
TMEM39B-208ENST00000487305 RUFY3Q7L099 469 aa14.84□□□□□ -0.03
TMEM39B-208ENST00000487305 LINS1Q8NG48 757 aa14.84□□□□□ -0.03
TMEM39B-208ENST00000487305 PDRG1Q9NUG6 133 aa14.84□□□□□ -0.03
TMEM39B-208ENST00000487305 FOXD4L5Q5VV16 416 aaPredicted RBP14.83□□□□□ -0.03
TMEM39B-208ENST00000487305 SASS6Q6UVJ0 657 aa14.83□□□□□ -0.03
TMEM39B-208ENST00000487305 CWC27Q6UX04 472 aaKnown RBP14.83□□□□□ -0.03
TMEM39B-208ENST00000487305 FOXD4L4Q8WXT5 416 aaPredicted RBP14.83□□□□□ -0.03
TMEM39B-208ENST00000487305 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.03
TMEM39B-208ENST00000487305 CASTP20810 708 aaKnown RBP14.83□□□□□ -0.04
TMEM39B-208ENST00000487305 HMGN5P82970 282 aaKnown RBP14.83□□□□□ -0.04
TMEM39B-208ENST00000487305 NBPF6Q5VWK0 638 aa14.83□□□□□ -0.04
TMEM39B-208ENST00000487305 ZNF530Q6P9A1 599 aaPredicted RBP14.83□□□□□ -0.04
TMEM39B-208ENST00000487305 NBPF4Q96M43 638 aa14.83□□□□□ -0.04
TMEM39B-208ENST00000487305 HMG20BQ9P0W2 317 aa14.83□□□□□ -0.04
TMEM39B-208ENST00000487305 ELP1O95163 1332 aa14.82□□□□□ -0.04
TMEM39B-208ENST00000487305 RNMTO43148 476 aaKnown RBP14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 GIGYF1O75420 1035 aaPredicted RBP14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 CEBPAP49715 358 aaPredicted RBP14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 NECTIN1Q15223 517 aa14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 NOL8Q76FK4 1167 aaKnown RBP14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 RASEFQ8IZ41 740 aa14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 PRIMPOLQ96LW4 560 aa14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 IL25Q9H293 177 aa14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 TSGA10IPQ3SY00 556 aa14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 RFX7Q2KHR2 1363 aa14.81□□□□□ -0.04
TMEM39B-208ENST00000487305 CAMTA1Q9Y6Y1 1673 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 GADD45BO75293 160 aaPredicted RBP14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 G3BP1Q13283 466 aaKnown RBP eCLIP14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 RNF214Q8ND24 703 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 JAKMIP1Q96N16 626 aaKnown RBP14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 LGR6Q9HBX8 967 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 USP25Q9UHP3 1055 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 TCHHQ07283 1943 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 SLIT3O75094 1523 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 GRM8O00222 908 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 PSME1Q06323 249 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 KRT32Q14532 448 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 DDX21Q9NR30 783 aaKnown RBP eCLIP14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 MAP3K2Q9Y2U5 619 aa14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 R3HCC1Q9Y3T6 440 aaKnown RBP14.8□□□□□ -0.04
TMEM39B-208ENST00000487305 ADAMTS7Q9UKP4 1686 aa14.79□□□□□ -0.04
TMEM39B-208ENST00000487305 GOLGA6L6A8MZA4 724 aa14.79□□□□□ -0.04
TMEM39B-208ENST00000487305 NUTM2GQ5VZR2 741 aa14.79□□□□□ -0.04
TMEM39B-208ENST00000487305 PIBF1Q8WXW3 757 aa14.79□□□□□ -0.04
TMEM39B-208ENST00000487305 MTMR6Q9Y217 621 aa14.79□□□□□ -0.04
TMEM39B-208ENST00000487305 CNPY2Q9Y2B0 182 aa14.79□□□□□ -0.04
TMEM39B-208ENST00000487305 KDM4AO75164 1064 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 GJB2P29033 226 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 KRT85P78386 507 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 C14orf37Q86TY3 774 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 SCAND2PQ9GZW5 306 aaPredicted RBP14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 COL15A1P39059 1388 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 CAVIN2O95810 425 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 CCDC192P0DO97 292 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 XPCQ01831 940 aaPredicted RBP14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 LARP1Q6PKG0 1096 aaKnown RBP14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 AACSQ86V21 672 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 SPG7Q9UQ90 795 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 MRC1P22897 1456 aa14.78□□□□□ -0.04
TMEM39B-208ENST00000487305 SIPA1L3O60292 1781 aaPredicted RBP14.77□□□□□ -0.04
TMEM39B-208ENST00000487305 MST1RQ04912 1400 aa14.77□□□□□ -0.04
TMEM39B-208ENST00000487305 MAP4K4O95819 1239 aaPredicted RBP14.77□□□□□ -0.04
TMEM39B-208ENST00000487305 NEXNQ0ZGT2 675 aa14.77□□□□□ -0.04
TMEM39B-208ENST00000487305 CREB3L3Q68CJ9 461 aa14.77□□□□□ -0.04
TMEM39B-208ENST00000487305 PRPF40BQ6NWY9 871 aaKnown RBP14.77□□□□□ -0.04
TMEM39B-208ENST00000487305 ARHGEF25Q86VW2 580 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms