RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 GPC2Q8N158 579 aa17.09■□□□□ 0.33
ATPAF1-205ENST00000487193 PUS7Q96PZ0 661 aaKnown RBP17.09■□□□□ 0.33
ATPAF1-205ENST00000487193 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
ATPAF1-205ENST00000487193 FKBP4Q02790 459 aaKnown RBP eCLIP17.08■□□□□ 0.32
ATPAF1-205ENST00000487193 TBC1D9BQ66K14 1250 aa17.08■□□□□ 0.32
ATPAF1-205ENST00000487193 STYK1Q6J9G0 422 aa17.08■□□□□ 0.32
ATPAF1-205ENST00000487193 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
ATPAF1-205ENST00000487193 CARD11Q9BXL7 1154 aa17.08■□□□□ 0.32
ATPAF1-205ENST00000487193 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
ATPAF1-205ENST00000487193 FZD9O00144 591 aa17.07■□□□□ 0.32
ATPAF1-205ENST00000487193 NPHP1O15259 732 aa17.07■□□□□ 0.32
ATPAF1-205ENST00000487193 EPS15P42566 896 aa17.07■□□□□ 0.32
ATPAF1-205ENST00000487193 MTHFSP49914 203 aa17.07■□□□□ 0.32
ATPAF1-205ENST00000487193 CCDC93Q567U6 631 aa17.07■□□□□ 0.32
ATPAF1-205ENST00000487193 CYP19A1P11511 503 aaPredicted RBP17.06■□□□□ 0.32
ATPAF1-205ENST00000487193 FXR1P51114 621 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATPAF1-205ENST00000487193 OLFM4Q6UX06 510 aa17.06■□□□□ 0.32
ATPAF1-205ENST00000487193 MASTLQ96GX5 879 aa17.06■□□□□ 0.32
ATPAF1-205ENST00000487193 ZNF408Q9H9D4 720 aa17.06■□□□□ 0.32
ATPAF1-205ENST00000487193 ZBTB1Q9Y2K1 713 aa17.06■□□□□ 0.32
ATPAF1-205ENST00000487193 SRGNP10124 158 aa17.05■□□□□ 0.32
ATPAF1-205ENST00000487193 ZNF530Q6P9A1 599 aaPredicted RBP17.05■□□□□ 0.32
ATPAF1-205ENST00000487193 C7orf43Q8WVR3 580 aa17.05■□□□□ 0.32
ATPAF1-205ENST00000487193 HPS5Q9UPZ3 1129 aa17.05■□□□□ 0.32
ATPAF1-205ENST00000487193 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
ATPAF1-205ENST00000487193 PLEKHO1Q53GL0 409 aaPredicted RBP17.04■□□□□ 0.32
ATPAF1-205ENST00000487193 HHIPL1Q96JK4 782 aa17.04■□□□□ 0.32
ATPAF1-205ENST00000487193 TRPA1O75762 1119 aa17.03■□□□□ 0.32
ATPAF1-205ENST00000487193 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
ATPAF1-205ENST00000487193 NOGQ13253 232 aa17.03■□□□□ 0.32
ATPAF1-205ENST00000487193 CTU1Q7Z7A3 348 aaKnown RBP17.03■□□□□ 0.32
ATPAF1-205ENST00000487193 SYNE4Q8N205 404 aa17.03■□□□□ 0.32
ATPAF1-205ENST00000487193 WASHC2AQ641Q2 1341 aa17.02■□□□□ 0.32
ATPAF1-205ENST00000487193 USP50Q70EL3 339 aaPredicted RBP17.02■□□□□ 0.32
ATPAF1-205ENST00000487193 ARFGEF2Q9Y6D5 1785 aa17.02■□□□□ 0.31
ATPAF1-205ENST00000487193 KIF20BQ96Q89 1820 aa17.01■□□□□ 0.31
ATPAF1-205ENST00000487193 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
ATPAF1-205ENST00000487193 JDP2Q8WYK2 163 aa17.01■□□□□ 0.31
ATPAF1-205ENST00000487193 SCNN1DP51172 638 aa17■□□□□ 0.31
ATPAF1-205ENST00000487193 ST5P78524 1137 aa17■□□□□ 0.31
ATPAF1-205ENST00000487193 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
ATPAF1-205ENST00000487193 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
ATPAF1-205ENST00000487193 CNBD1Q8NA66 436 aa17■□□□□ 0.31
ATPAF1-205ENST00000487193 GLIS2Q9BZE0 524 aaPredicted RBP17■□□□□ 0.31
ATPAF1-205ENST00000487193 RNF186Q9NXI6 227 aa17■□□□□ 0.31
ATPAF1-205ENST00000487193 NEUROD1Q13562 356 aa16.99■□□□□ 0.31
ATPAF1-205ENST00000487193 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
ATPAF1-205ENST00000487193 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
ATPAF1-205ENST00000487193 SAGE1Q9NXZ1 904 aa16.99■□□□□ 0.31
ATPAF1-205ENST00000487193 SLC39A6Q13433 755 aa16.98■□□□□ 0.31
ATPAF1-205ENST00000487193 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
ATPAF1-205ENST00000487193 SLC17A8Q8NDX2 589 aa16.98■□□□□ 0.31
ATPAF1-205ENST00000487193 ANKRD26Q9UPS8 1709 aa16.97■□□□□ 0.31
ATPAF1-205ENST00000487193 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
ATPAF1-205ENST00000487193 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
ATPAF1-205ENST00000487193 ZNF330Q9Y3S2 320 aaPredicted RBP16.97■□□□□ 0.31
ATPAF1-205ENST00000487193 A0A087WZG4 1122 aa16.96■□□□□ 0.31
ATPAF1-205ENST00000487193 HUNKP57058 714 aa16.96■□□□□ 0.31
ATPAF1-205ENST00000487193 KIF23Q02241 960 aaPredicted RBP16.96■□□□□ 0.31
ATPAF1-205ENST00000487193 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
ATPAF1-205ENST00000487193 AKAP11Q9UKA4 1901 aa16.94■□□□□ 0.3
ATPAF1-205ENST00000487193 NPR1P16066 1061 aa16.94■□□□□ 0.3
ATPAF1-205ENST00000487193 EIF5P55010 431 aaKnown RBP16.94■□□□□ 0.3
ATPAF1-205ENST00000487193 SCN11AQ9UI33 1791 aa16.93■□□□□ 0.3
ATPAF1-205ENST00000487193 ADARB2Q9NS39 739 aaKnown RBP16.93■□□□□ 0.3
ATPAF1-205ENST00000487193 FAM155AB1AL88 458 aaPredicted RBP16.92■□□□□ 0.3
ATPAF1-205ENST00000487193 TESK2Q96S53 571 aa16.92■□□□□ 0.3
ATPAF1-205ENST00000487193 POLKQ9UBT6 870 aa16.92■□□□□ 0.3
ATPAF1-205ENST00000487193 HDAC9Q9UKV0 1011 aa16.92■□□□□ 0.3
ATPAF1-205ENST00000487193 COL4A5P29400 1685 aa16.91■□□□□ 0.3
ATPAF1-205ENST00000487193 PKN2Q16513 984 aaKnown RBP16.91■□□□□ 0.3
ATPAF1-205ENST00000487193 RGMBQ6NW40 437 aa16.91■□□□□ 0.3
ATPAF1-205ENST00000487193 BCORQ6W2J9 1755 aa16.91■□□□□ 0.3
ATPAF1-205ENST00000487193 DLK2Q6UY11 383 aa16.9■□□□□ 0.3
ATPAF1-205ENST00000487193 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
ATPAF1-205ENST00000487193 LGR6Q9HBX8 967 aa16.9■□□□□ 0.3
ATPAF1-205ENST00000487193 COLQQ9Y215 455 aaPredicted RBP16.9■□□□□ 0.3
ATPAF1-205ENST00000487193 ZNF157P51786 506 aaPredicted RBP16.89■□□□□ 0.29
ATPAF1-205ENST00000487193 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
ATPAF1-205ENST00000487193 LARGE2Q8N3Y3 721 aa16.89■□□□□ 0.29
ATPAF1-205ENST00000487193 CSRNP1Q96S65 589 aa16.89■□□□□ 0.29
ATPAF1-205ENST00000487193 PSMD1Q99460 953 aa16.89■□□□□ 0.29
ATPAF1-205ENST00000487193 GPRC5DQ9NZD1 345 aa16.89■□□□□ 0.29
ATPAF1-205ENST00000487193 STARD3NLO95772 234 aa16.88■□□□□ 0.29
ATPAF1-205ENST00000487193 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
ATPAF1-205ENST00000487193 CDC37L1Q7L3B6 337 aa16.88■□□□□ 0.29
ATPAF1-205ENST00000487193 NBPF5PQ86XG9 351 aaPredicted RBP16.88■□□□□ 0.29
ATPAF1-205ENST00000487193 CCDC102AQ96A19 550 aa16.88■□□□□ 0.29
ATPAF1-205ENST00000487193 CARD14Q9BXL6 1004 aa16.88■□□□□ 0.29
ATPAF1-205ENST00000487193 PGAP2Q9UHJ9 254 aa16.87■□□□□ 0.29
ATPAF1-205ENST00000487193 SCN7AQ01118 1682 aa16.87■□□□□ 0.29
ATPAF1-205ENST00000487193 ALDH1B1P30837 517 aa16.86■□□□□ 0.29
ATPAF1-205ENST00000487193 AEBP1Q8IUX7 1158 aa16.86■□□□□ 0.29
ATPAF1-205ENST00000487193 VSIG10Q8N0Z9 540 aa16.86■□□□□ 0.29
ATPAF1-205ENST00000487193 HIRAP54198 1017 aaPredicted RBP16.85■□□□□ 0.29
ATPAF1-205ENST00000487193 FAM177BA6PVY3 158 aa16.84■□□□□ 0.29
ATPAF1-205ENST00000487193 CAMTA2O94983 1202 aa16.84■□□□□ 0.29
ATPAF1-205ENST00000487193 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
ATPAF1-205ENST00000487193 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
ATPAF1-205ENST00000487193 C2orf69Q8N8R5 385 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms