RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 THUMPD2Q9BTF0 503 aaKnown RBP13.39□□□□□ -0.27
LBR-207ENST00000487054 TEX13AQ9BXU3 409 aaPredicted RBP13.39□□□□□ -0.27
LBR-207ENST00000487054 CCDC88AQ3V6T2 1871 aa13.39□□□□□ -0.27
LBR-207ENST00000487054 A0A087WZG4 1122 aa13.38□□□□□ -0.27
LBR-207ENST00000487054 PRELPP51888 382 aa13.38□□□□□ -0.27
LBR-207ENST00000487054 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
LBR-207ENST00000487054 PLEKHF1Q96S99 279 aa13.38□□□□□ -0.27
LBR-207ENST00000487054 NMRK2Q9NPI5 230 aa13.38□□□□□ -0.27
LBR-207ENST00000487054 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
LBR-207ENST00000487054 NBPF26B4DH59 902 aa13.37□□□□□ -0.27
LBR-207ENST00000487054 NEFMP07197 916 aa13.37□□□□□ -0.27
LBR-207ENST00000487054 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
LBR-207ENST00000487054 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
LBR-207ENST00000487054 PRR5LQ6MZQ0 368 aa13.37□□□□□ -0.27
LBR-207ENST00000487054 NBPF10Q6P3W6 841 aaKnown RBP13.37□□□□□ -0.27
LBR-207ENST00000487054 C2CD5Q86YS7 1000 aa13.37□□□□□ -0.27
LBR-207ENST00000487054 NBPF15Q8N660 670 aa13.37□□□□□ -0.27
LBR-207ENST00000487054 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
LBR-207ENST00000487054 SNRPA1P09661 255 aaKnown RBP13.36□□□□□ -0.27
LBR-207ENST00000487054 DZIP3Q86Y13 1208 aaKnown RBP13.36□□□□□ -0.27
LBR-207ENST00000487054 RNF181Q9P0P0 153 aa13.36□□□□□ -0.27
LBR-207ENST00000487054 HTATSF1O43719 755 aaKnown RBP13.35□□□□□ -0.27
LBR-207ENST00000487054 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
LBR-207ENST00000487054 TAF7Q15545 349 aaPredicted RBP13.35□□□□□ -0.27
LBR-207ENST00000487054 SLX4Q8IY92 1834 aa13.34□□□□□ -0.27
LBR-207ENST00000487054 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
LBR-207ENST00000487054 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
LBR-207ENST00000487054 FER1L6Q2WGJ9 1857 aa13.33□□□□□ -0.27
LBR-207ENST00000487054 ARFGEF2Q9Y6D5 1785 aa13.33□□□□□ -0.28
LBR-207ENST00000487054 H0YIN7 160 aa13.33□□□□□ -0.28
LBR-207ENST00000487054 NFKBIEO00221 500 aa13.33□□□□□ -0.28
LBR-207ENST00000487054 TTLL6Q8N841 843 aa13.33□□□□□ -0.28
LBR-207ENST00000487054 NUP98P52948 1817 aa13.32□□□□□ -0.28
LBR-207ENST00000487054 TNRC6CQ9HCJ0 1690 aaKnown RBP13.32□□□□□ -0.28
LBR-207ENST00000487054 HSPA6P17066 643 aa13.32□□□□□ -0.28
LBR-207ENST00000487054 HLFQ16534 295 aa13.32□□□□□ -0.28
LBR-207ENST00000487054 CNBD1Q8NA66 436 aa13.32□□□□□ -0.28
LBR-207ENST00000487054 ZNF622Q969S3 477 aaKnown RBP eCLIP13.32□□□□□ -0.28
LBR-207ENST00000487054 SETDB2Q96T68 719 aa13.32□□□□□ -0.28
LBR-207ENST00000487054 BRIP1Q9BX63 1249 aa13.32□□□□□ -0.28
LBR-207ENST00000487054 FAM177BA6PVY3 158 aa13.31□□□□□ -0.28
LBR-207ENST00000487054 NPM2Q86SE8 214 aaKnown RBP13.31□□□□□ -0.28
LBR-207ENST00000487054 NGEFQ8N5V2 710 aa13.31□□□□□ -0.28
LBR-207ENST00000487054 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
LBR-207ENST00000487054 C21orf2O43822 256 aa13.3□□□□□ -0.28
LBR-207ENST00000487054 PDE6BP35913 854 aa13.3□□□□□ -0.28
LBR-207ENST00000487054 EIF4A1P60842 406 aaKnown RBP13.3□□□□□ -0.28
LBR-207ENST00000487054 RRAGCQ9HB90 399 aa13.3□□□□□ -0.28
LBR-207ENST00000487054 DICER1Q9UPY3 1922 aaKnown RBP13.3□□□□□ -0.28
LBR-207ENST00000487054 TOMM70O94826 608 aa13.29□□□□□ -0.28
LBR-207ENST00000487054 DIEXFQ68CQ4 756 aaKnown RBP13.29□□□□□ -0.28
LBR-207ENST00000487054 TTLL7Q6ZT98 887 aa13.29□□□□□ -0.28
LBR-207ENST00000487054 NBPF5PQ86XG9 351 aaPredicted RBP13.29□□□□□ -0.28
LBR-207ENST00000487054 CCDC146Q8IYE0 955 aa13.29□□□□□ -0.28
LBR-207ENST00000487054 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
LBR-207ENST00000487054 RRP7AQ9Y3A4 280 aaKnown RBP13.29□□□□□ -0.28
LBR-207ENST00000487054 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
LBR-207ENST00000487054 NPHP1O15259 732 aa13.28□□□□□ -0.28
LBR-207ENST00000487054 SRGNP10124 158 aa13.28□□□□□ -0.28
LBR-207ENST00000487054 MYL6BP14649 208 aa13.28□□□□□ -0.28
LBR-207ENST00000487054 LMNB1P20700 586 aa13.28□□□□□ -0.28
LBR-207ENST00000487054 ST5P78524 1137 aa13.28□□□□□ -0.28
LBR-207ENST00000487054 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
LBR-207ENST00000487054 WDR90Q96KV7 1748 aa13.27□□□□□ -0.28
LBR-207ENST00000487054 RIPK4P57078 832 aa13.27□□□□□ -0.29
LBR-207ENST00000487054 PRPF40BQ6NWY9 871 aaKnown RBP13.27□□□□□ -0.29
LBR-207ENST00000487054 OLFM4Q6UX06 510 aa13.27□□□□□ -0.29
LBR-207ENST00000487054 CLEC4GQ6UXB4 293 aa13.27□□□□□ -0.29
LBR-207ENST00000487054 PNISRQ8TF01 805 aaKnown RBP13.27□□□□□ -0.29
LBR-207ENST00000487054 RUNDC1Q96C34 613 aa13.27□□□□□ -0.29
LBR-207ENST00000487054 HTRA3P83110 453 aa13.26□□□□□ -0.29
LBR-207ENST00000487054 SLC51AQ86UW1 340 aa13.26□□□□□ -0.29
LBR-207ENST00000487054 KDM2BQ8NHM5 1336 aa13.26□□□□□ -0.29
LBR-207ENST00000487054 ABCC12Q96J65 1359 aa13.26□□□□□ -0.29
LBR-207ENST00000487054 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
LBR-207ENST00000487054 ZNF652Q9Y2D9 606 aa13.26□□□□□ -0.29
LBR-207ENST00000487054 ANXA1P04083 346 aa13.25□□□□□ -0.29
LBR-207ENST00000487054 TMPOP42166 694 aaKnown RBP13.25□□□□□ -0.29
LBR-207ENST00000487054 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
LBR-207ENST00000487054 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
LBR-207ENST00000487054 STYK1Q6J9G0 422 aa13.25□□□□□ -0.29
LBR-207ENST00000487054 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
LBR-207ENST00000487054 MASTLQ96GX5 879 aa13.25□□□□□ -0.29
LBR-207ENST00000487054 ZBTB3Q9H5J0 574 aa13.25□□□□□ -0.29
LBR-207ENST00000487054 ADAMTS8Q9UP79 889 aa13.25□□□□□ -0.29
LBR-207ENST00000487054 MAP3K15Q6ZN16 1313 aa13.24□□□□□ -0.29
LBR-207ENST00000487054 UBN2Q6ZU65 1347 aa13.24□□□□□ -0.29
LBR-207ENST00000487054 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
LBR-207ENST00000487054 GPTP24298 496 aa13.24□□□□□ -0.29
LBR-207ENST00000487054 KRT24Q2M2I5 525 aa13.24□□□□□ -0.29
LBR-207ENST00000487054 PROSER3Q2NL68 480 aa13.24□□□□□ -0.29
LBR-207ENST00000487054 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
LBR-207ENST00000487054 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
LBR-207ENST00000487054 CNKSR1Q969H4 720 aa13.24□□□□□ -0.29
LBR-207ENST00000487054 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
LBR-207ENST00000487054 KLRG2A4D1S0 409 aaPredicted RBP13.23□□□□□ -0.29
LBR-207ENST00000487054 GLTPD2A6NH11 291 aa13.23□□□□□ -0.29
LBR-207ENST00000487054 POTECB2RU33 542 aa13.23□□□□□ -0.29
LBR-207ENST00000487054 PDIA6Q15084 440 aa13.23□□□□□ -0.29
LBR-207ENST00000487054 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms