RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 KCNQ3O43525 872 aa26.86■■□□□ 1.89
PHF1-208ENST00000486845 PHACTR3Q96KR7 559 aa26.86■■□□□ 1.89
PHF1-208ENST00000486845 ARFGEF2Q9Y6D5 1785 aa26.85■■□□□ 1.89
PHF1-208ENST00000486845 SRGNP10124 158 aa26.85■■□□□ 1.89
PHF1-208ENST00000486845 RSPH6AQ9H0K4 717 aa26.85■■□□□ 1.89
PHF1-208ENST00000486845 SLX4Q8IY92 1834 aa26.85■■□□□ 1.89
PHF1-208ENST00000486845 PRPF40BQ6NWY9 871 aaKnown RBP26.84■■□□□ 1.89
PHF1-208ENST00000486845 MASTLQ96GX5 879 aa26.84■■□□□ 1.89
PHF1-208ENST00000486845 CACNA1SQ13698 1873 aa26.84■■□□□ 1.89
PHF1-208ENST00000486845 NUDCQ9Y266 331 aa26.83■■□□□ 1.89
PHF1-208ENST00000486845 CLEC4GQ6UXB4 293 aa26.82■■□□□ 1.88
PHF1-208ENST00000486845 ZNF652Q9Y2D9 606 aa26.82■■□□□ 1.88
PHF1-208ENST00000486845 USP16Q9Y5T5 823 aa26.82■■□□□ 1.88
PHF1-208ENST00000486845 PCNTO95613 3336 aa26.82■■□□□ 1.88
PHF1-208ENST00000486845 NBPF5PQ86XG9 351 aaPredicted RBP26.81■■□□□ 1.88
PHF1-208ENST00000486845 SNRPA1P09661 255 aaKnown RBP26.8■■□□□ 1.88
PHF1-208ENST00000486845 CHADLQ6NUI6 762 aa26.8■■□□□ 1.88
PHF1-208ENST00000486845 TNS4Q8IZW8 715 aa26.8■■□□□ 1.88
PHF1-208ENST00000486845 RTF1Q92541 710 aaKnown RBP26.8■■□□□ 1.88
PHF1-208ENST00000486845 HSPA1AP0DMV8 641 aaKnown RBP26.79■■□□□ 1.88
PHF1-208ENST00000486845 HSPA1BP0DMV9 641 aaKnown RBP26.79■■□□□ 1.88
PHF1-208ENST00000486845 PIP4K2AP48426 406 aaPredicted RBP26.79■■□□□ 1.88
PHF1-208ENST00000486845 DDNO94850 711 aaPredicted RBP26.78■■□□□ 1.88
PHF1-208ENST00000486845 PRAMEF22A3QJZ6 481 aa26.77■■□□□ 1.88
PHF1-208ENST00000486845 RGL2O15211 777 aa26.77■■□□□ 1.88
PHF1-208ENST00000486845 CCDC93Q567U6 631 aa26.77■■□□□ 1.88
PHF1-208ENST00000486845 U2AF1L5P0DN76 240 aaPredicted RBP26.76■■□□□ 1.87
PHF1-208ENST00000486845 NPR1P16066 1061 aa26.76■■□□□ 1.87
PHF1-208ENST00000486845 U2AF1Q01081 240 aaKnown RBP eCLIP26.76■■□□□ 1.87
PHF1-208ENST00000486845 MCM10Q7L590 875 aa26.76■■□□□ 1.87
PHF1-208ENST00000486845 IQCA1LA6NCM1 817 aa26.75■■□□□ 1.87
PHF1-208ENST00000486845 C7orf43Q8WVR3 580 aa26.75■■□□□ 1.87
PHF1-208ENST00000486845 CREBZFQ9NS37 354 aa26.75■■□□□ 1.87
PHF1-208ENST00000486845 TPTE2Q6XPS3 522 aa26.74■■□□□ 1.87
PHF1-208ENST00000486845 KLRG2A4D1S0 409 aaPredicted RBP26.73■■□□□ 1.87
PHF1-208ENST00000486845 HTATSF1O43719 755 aaKnown RBP26.73■■□□□ 1.87
PHF1-208ENST00000486845 NIP7Q9Y221 180 aaKnown RBP eCLIP26.73■■□□□ 1.87
PHF1-208ENST00000486845 SCN4AP35499 1836 aa26.72■■□□□ 1.87
PHF1-208ENST00000486845 CAPN15O75808 1086 aa26.72■■□□□ 1.87
PHF1-208ENST00000486845 POTEIP0CG38 1075 aa26.72■■□□□ 1.87
PHF1-208ENST00000486845 POTEJP0CG39 1038 aa26.72■■□□□ 1.87
PHF1-208ENST00000486845 L3MBTL3Q96JM7 780 aaPredicted RBP26.72■■□□□ 1.87
PHF1-208ENST00000486845 NBPF26B4DH59 902 aa26.71■■□□□ 1.87
PHF1-208ENST00000486845 PPP2R1AP30153 589 aa26.71■■□□□ 1.87
PHF1-208ENST00000486845 FKBP4Q02790 459 aaKnown RBP eCLIP26.71■■□□□ 1.87
PHF1-208ENST00000486845 NBPF10Q6P3W6 841 aaKnown RBP26.71■■□□□ 1.87
PHF1-208ENST00000486845 NBPF15Q8N660 670 aa26.71■■□□□ 1.87
PHF1-208ENST00000486845 LDHDQ86WU2 507 aa26.7■■□□□ 1.86
PHF1-208ENST00000486845 DCTN1Q14203 1278 aa26.69■■□□□ 1.86
PHF1-208ENST00000486845 TAF7Q15545 349 aaPredicted RBP26.68■■□□□ 1.86
PHF1-208ENST00000486845 RTKN2Q8IZC4 609 aa26.68■■□□□ 1.86
PHF1-208ENST00000486845 TAF1DQ9H5J8 278 aaPredicted RBP26.68■■□□□ 1.86
PHF1-208ENST00000486845 MKRN1Q9UHC7 482 aaKnown RBP26.68■■□□□ 1.86
PHF1-208ENST00000486845 LAMB4A4D0S4 1761 aa26.68■■□□□ 1.86
PHF1-208ENST00000486845 ZNF277Q9NRM2 450 aaPredicted RBP26.67■■□□□ 1.86
PHF1-208ENST00000486845 FAM177BA6PVY3 158 aa26.66■■□□□ 1.86
PHF1-208ENST00000486845 ALDH1B1P30837 517 aa26.66■■□□□ 1.86
PHF1-208ENST00000486845 GTF2E1P29083 439 aaPredicted RBP26.65■■□□□ 1.86
PHF1-208ENST00000486845 PASKQ96RG2 1323 aa26.65■■□□□ 1.86
PHF1-208ENST00000486845 ZNF541Q9H0D2 1346 aa26.65■■□□□ 1.86
PHF1-208ENST00000486845 CNTNAP1P78357 1384 aa26.64■■□□□ 1.86
PHF1-208ENST00000486845 HLFQ16534 295 aa26.64■■□□□ 1.86
PHF1-208ENST00000486845 OLFM4Q6UX06 510 aa26.63■■□□□ 1.85
PHF1-208ENST00000486845 HACL1Q9UJ83 578 aa26.63■■□□□ 1.85
PHF1-208ENST00000486845 NYXQ9GZU5 481 aa26.62■■□□□ 1.85
PHF1-208ENST00000486845 NEFMP07197 916 aa26.61■■□□□ 1.85
PHF1-208ENST00000486845 IARSP41252 1262 aaKnown RBP26.61■■□□□ 1.85
PHF1-208ENST00000486845 EAPPQ56P03 285 aaPredicted RBP26.61■■□□□ 1.85
PHF1-208ENST00000486845 PNISRQ8TF01 805 aaKnown RBP26.61■■□□□ 1.85
PHF1-208ENST00000486845 ERVV-1B6SEH8 477 aa26.6■■□□□ 1.85
PHF1-208ENST00000486845 SYNE4Q8N205 404 aa26.6■■□□□ 1.85
PHF1-208ENST00000486845 MIS18AQ9NYP9 233 aa26.6■■□□□ 1.85
PHF1-208ENST00000486845 KDM3BQ7LBC6 1761 aa26.59■■□□□ 1.85
PHF1-208ENST00000486845 TMEM88BA6NKF7 163 aa26.59■■□□□ 1.85
PHF1-208ENST00000486845 FZD9O00144 591 aa26.59■■□□□ 1.85
PHF1-208ENST00000486845 EPHX2P34913 555 aa26.59■■□□□ 1.85
PHF1-208ENST00000486845 CRY2Q49AN0 593 aa26.59■■□□□ 1.85
PHF1-208ENST00000486845 CLEC11AQ9Y240 323 aa26.59■■□□□ 1.85
PHF1-208ENST00000486845 ABCC12Q96J65 1359 aa26.58■■□□□ 1.85
PHF1-208ENST00000486845 ADAMTSL1Q8N6G6 1762 aa26.58■■□□□ 1.85
PHF1-208ENST00000486845 ITGBL1O95965 494 aaPredicted RBP26.58■■□□□ 1.85
PHF1-208ENST00000486845 PNMA8AQ86V59 439 aaPredicted RBP26.58■■□□□ 1.85
PHF1-208ENST00000486845 PSMD1Q99460 953 aa26.58■■□□□ 1.85
PHF1-208ENST00000486845 CC2D2BQ6DHV5 1058 aa26.57■■□□□ 1.84
PHF1-208ENST00000486845 KIF6Q6ZMV9 814 aa26.57■■□□□ 1.84
PHF1-208ENST00000486845 GPC2Q8N158 579 aa26.57■■□□□ 1.84
PHF1-208ENST00000486845 NGEFQ8N5V2 710 aa26.57■■□□□ 1.84
PHF1-208ENST00000486845 NUP98P52948 1817 aa26.57■■□□□ 1.84
PHF1-208ENST00000486845 MAP3K15Q6ZN16 1313 aa26.57■■□□□ 1.84
PHF1-208ENST00000486845 DLG5Q8TDM6 1919 aa26.57■■□□□ 1.84
PHF1-208ENST00000486845 RIC1Q4ADV7 1423 aa26.56■■□□□ 1.84
PHF1-208ENST00000486845 SNED1Q8TER0 1413 aa26.56■■□□□ 1.84
PHF1-208ENST00000486845 JDP2Q8WYK2 163 aa26.56■■□□□ 1.84
PHF1-208ENST00000486845 RNF123Q5XPI4 1314 aa26.56■■□□□ 1.84
PHF1-208ENST00000486845 IBTKQ9P2D0 1353 aaPredicted RBP26.56■■□□□ 1.84
PHF1-208ENST00000486845 NUTM1Q86Y26 1132 aa26.55■■□□□ 1.84
PHF1-208ENST00000486845 RPGRQ92834 1020 aaKnown RBP26.55■■□□□ 1.84
PHF1-208ENST00000486845 FOXN1O15353 648 aa26.54■■□□□ 1.84
PHF1-208ENST00000486845 RRP7AQ9Y3A4 280 aaKnown RBP26.54■■□□□ 1.84
PHF1-208ENST00000486845 VEGFBP49765 207 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms