RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 GNB5O14775 395 aa9.17□□□□□ -0.94
SMC4-218ENST00000486711 PSMA6P60900 246 aaKnown RBP9.17□□□□□ -0.94
SMC4-218ENST00000486711 ZNF468Q5VIY5 522 aaPredicted RBP9.17□□□□□ -0.94
SMC4-218ENST00000486711 LINC00114Q6XXX2 140 aa9.17□□□□□ -0.94
SMC4-218ENST00000486711 PROSER2Q86WR7 435 aaPredicted RBP9.17□□□□□ -0.94
SMC4-218ENST00000486711 ITGB2P05107 769 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 DGKGP49619 791 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 LRRC69Q6ZNQ3 347 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 CHSY3Q70JA7 882 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 FCHSD1Q86WN1 690 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 SIX5Q8N196 739 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 RHPN1Q8TCX5 695 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 GLMNQ92990 594 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 CLUAP1Q96AJ1 413 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 TSPAN10Q9H1Z9 355 aaPredicted RBP9.16□□□□□ -0.94
SMC4-218ENST00000486711 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
SMC4-218ENST00000486711 COL8A1P27658 744 aa9.15□□□□□ -0.94
SMC4-218ENST00000486711 GRIN2CQ14957 1233 aa9.15□□□□□ -0.94
SMC4-218ENST00000486711 STRN4Q9NRL3 753 aa9.15□□□□□ -0.94
SMC4-218ENST00000486711 LOC100996750A0A140TA64 210 aa9.14□□□□□ -0.95
SMC4-218ENST00000486711 KRBA1A5PL33 1030 aa9.14□□□□□ -0.95
SMC4-218ENST00000486711 PROCP04070 461 aa9.14□□□□□ -0.95
SMC4-218ENST00000486711 HIRAP54198 1017 aaPredicted RBP9.14□□□□□ -0.95
SMC4-218ENST00000486711 PCBP4P57723 403 aaKnown RBP9.14□□□□□ -0.95
SMC4-218ENST00000486711 SH3PXD2AQ5TCZ1 1133 aa9.14□□□□□ -0.95
SMC4-218ENST00000486711 C1orf53Q5VUE5 145 aa9.14□□□□□ -0.95
SMC4-218ENST00000486711 FNBP4Q8N3X1 1017 aaPredicted RBP9.14□□□□□ -0.95
SMC4-218ENST00000486711 ZNF594Q96JF6 807 aaPredicted RBP9.14□□□□□ -0.95
SMC4-218ENST00000486711 KRTAP4-6Q9BYQ5 205 aa9.14□□□□□ -0.95
SMC4-218ENST00000486711 NOP53Q9NZM5 478 aaKnown RBP9.14□□□□□ -0.95
SMC4-218ENST00000486711 C7orf43Q8WVR3 580 aa9.13□□□□□ -0.95
SMC4-218ENST00000486711 SUV39H2Q9H5I1 410 aa9.13□□□□□ -0.95
SMC4-218ENST00000486711 POTEAQ6S8J7 498 aa9.12□□□□□ -0.95
SMC4-218ENST00000486711 TSEN2Q8NCE0 465 aaKnown RBP9.12□□□□□ -0.95
SMC4-218ENST00000486711 ANKIB1Q9P2G1 1089 aa9.12□□□□□ -0.95
SMC4-218ENST00000486711 SFI1A8K8P3 1242 aa9.11□□□□□ -0.95
SMC4-218ENST00000486711 PPP1R12BO60237 982 aaPredicted RBP9.11□□□□□ -0.95
SMC4-218ENST00000486711 RASA1P20936 1047 aa9.11□□□□□ -0.95
SMC4-218ENST00000486711 SYT9Q86SS6 491 aa9.11□□□□□ -0.95
SMC4-218ENST00000486711 PHACTR1Q9C0D0 580 aa9.11□□□□□ -0.95
SMC4-218ENST00000486711 TFIP11Q9UBB9 837 aaKnown RBP9.11□□□□□ -0.95
SMC4-218ENST00000486711 MAFBQ9Y5Q3 323 aaPredicted RBP9.11□□□□□ -0.95
SMC4-218ENST00000486711 ELOA3CA0A087WX78 387 aaPredicted RBP9.1□□□□□ -0.95
SMC4-218ENST00000486711 ELOA3DA6NLF2 546 aaPredicted RBP9.1□□□□□ -0.95
SMC4-218ENST00000486711 DKK1O94907 266 aa9.1□□□□□ -0.95
SMC4-218ENST00000486711 ELOA3BQ3SY89 546 aa9.1□□□□□ -0.95
SMC4-218ENST00000486711 ELOA3Q8NG57 546 aa9.1□□□□□ -0.95
SMC4-218ENST00000486711 HCN4Q9Y3Q4 1203 aa9.1□□□□□ -0.95
SMC4-218ENST00000486711 SIN3BO75182 1162 aa9.09□□□□□ -0.95
SMC4-218ENST00000486711 ALAS2P22557 587 aa9.09□□□□□ -0.95
SMC4-218ENST00000486711 SEC13P55735 322 aa9.09□□□□□ -0.95
SMC4-218ENST00000486711 STAG2Q8N3U4 1231 aa9.09□□□□□ -0.95
SMC4-218ENST00000486711 GAS2L2Q8NHY3 880 aa9.09□□□□□ -0.95
SMC4-218ENST00000486711 A6NJR5 290 aa9.08□□□□□ -0.96
SMC4-218ENST00000486711 SFSWAPQ12872 951 aaKnown RBP9.08□□□□□ -0.96
SMC4-218ENST00000486711 NEUROD1Q13562 356 aa9.08□□□□□ -0.96
SMC4-218ENST00000486711 LARP1Q6PKG0 1096 aaKnown RBP9.08□□□□□ -0.96
SMC4-218ENST00000486711 HSH2DQ96JZ2 352 aa9.08□□□□□ -0.96
SMC4-218ENST00000486711 CALR3Q96L12 384 aaKnown RBP9.08□□□□□ -0.96
SMC4-218ENST00000486711 CEP63Q96MT8 703 aa9.08□□□□□ -0.96
SMC4-218ENST00000486711 BRD7Q9NPI1 651 aa9.08□□□□□ -0.96
SMC4-218ENST00000486711 HIF1AQ16665 826 aa9.07□□□□□ -0.96
SMC4-218ENST00000486711 ATAD2Q6PL18 1390 aa9.07□□□□□ -0.96
SMC4-218ENST00000486711 ADARB2-AS1A8MUL3 147 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 C21orf2O43822 256 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 ADAM23O75077 832 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 SPEM2Q0P670 501 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 ALDH16A1Q8IZ83 802 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 TNFRSF25Q93038 417 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 SUSD3Q96L08 255 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 SLC30A3Q99726 388 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 MDFIQ99750 246 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 PPP1R12CQ9BZL4 782 aa9.06□□□□□ -0.96
SMC4-218ENST00000486711 BAG6P46379 1132 aa9.05□□□□□ -0.96
SMC4-218ENST00000486711 KCNQ4P56696 695 aa9.05□□□□□ -0.96
SMC4-218ENST00000486711 TYRO3Q06418 890 aa9.05□□□□□ -0.96
SMC4-218ENST00000486711 SCG3Q8WXD2 468 aaKnown RBP9.05□□□□□ -0.96
SMC4-218ENST00000486711 C2orf49Q9BVC5 232 aaPredicted RBP9.05□□□□□ -0.96
SMC4-218ENST00000486711 KCNH4Q9UQ05 1017 aa9.05□□□□□ -0.96
SMC4-218ENST00000486711 ZNF280CQ8ND82 737 aa9.04□□□□□ -0.96
SMC4-218ENST00000486711 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
SMC4-218ENST00000486711 TRIM11Q96F44 468 aa9.04□□□□□ -0.96
SMC4-218ENST00000486711 SPDYE3A6NKU9 549 aa9.03□□□□□ -0.96
SMC4-218ENST00000486711 C1QTNF9BB2RNN3 333 aa9.03□□□□□ -0.96
SMC4-218ENST00000486711 PTK7Q13308 1070 aa9.03□□□□□ -0.96
SMC4-218ENST00000486711 CRTC2Q53ET0 693 aaPredicted RBP9.03□□□□□ -0.96
SMC4-218ENST00000486711 HINFPQ9BQA5 517 aa9.03□□□□□ -0.96
SMC4-218ENST00000486711 PLVAPQ9BX97 442 aa9.03□□□□□ -0.96
SMC4-218ENST00000486711 FAM196BA6NMK8 535 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L15C9J2P7 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L10C9JJH3 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L13C9JLJ4 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L12C9JPN9 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L11C9JVI0 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L21D6R901 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L18D6R9N7 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L22D6RA61 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L17D6RBQ6 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L19D6RCP7 530 aa9.02□□□□□ -0.97
SMC4-218ENST00000486711 USP17L20D6RJB6 530 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms