RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 TBC1D2BQ9UPU7 963 aa21.01■□□□□ 0.95
THBS3-207ENST00000486260 MAP3K2Q9Y2U5 619 aa21.01■□□□□ 0.95
THBS3-207ENST00000486260 PDE3AQ14432 1141 aa21■□□□□ 0.95
THBS3-207ENST00000486260 DZIP3Q86Y13 1208 aaKnown RBP21■□□□□ 0.95
THBS3-207ENST00000486260 FTSJ3Q8IY81 847 aaKnown RBP21■□□□□ 0.95
THBS3-207ENST00000486260 AKT1S1Q96B36 256 aa21■□□□□ 0.95
THBS3-207ENST00000486260 ZBTB3Q9H5J0 574 aa21■□□□□ 0.95
THBS3-207ENST00000486260 PHF14O94880 888 aa21■□□□□ 0.95
THBS3-207ENST00000486260 SLC4A10Q6U841 1118 aa21■□□□□ 0.95
THBS3-207ENST00000486260 KIF6Q6ZMV9 814 aa21■□□□□ 0.95
THBS3-207ENST00000486260 PLBD2Q8NHP8 589 aa21■□□□□ 0.95
THBS3-207ENST00000486260 ABCC4O15439 1325 aa20.99■□□□□ 0.95
THBS3-207ENST00000486260 MS4A1P11836 297 aa20.99■□□□□ 0.95
THBS3-207ENST00000486260 DNAAF4Q8WXU2 420 aa20.99■□□□□ 0.95
THBS3-207ENST00000486260 UBR3Q6ZT12 1888 aa20.98■□□□□ 0.95
THBS3-207ENST00000486260 NUP188Q5SRE5 1749 aa20.98■□□□□ 0.95
THBS3-207ENST00000486260 MAP3K15Q6ZN16 1313 aa20.98■□□□□ 0.95
THBS3-207ENST00000486260 A0A087WZG4 1122 aa20.97■□□□□ 0.95
THBS3-207ENST00000486260 TRAPPC3LQ5T215 181 aa20.97■□□□□ 0.95
THBS3-207ENST00000486260 TMEM57Q8N5G2 664 aa20.97■□□□□ 0.95
THBS3-207ENST00000486260 ARHGEF1Q92888 912 aaKnown RBP20.97■□□□□ 0.95
THBS3-207ENST00000486260 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
THBS3-207ENST00000486260 TFCP2L1Q9NZI6 479 aa20.97■□□□□ 0.95
THBS3-207ENST00000486260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.97■□□□□ 0.95
THBS3-207ENST00000486260 HLFQ16534 295 aa20.96■□□□□ 0.95
THBS3-207ENST00000486260 ARFGEF2Q9Y6D5 1785 aa20.95■□□□□ 0.94
THBS3-207ENST00000486260 CAMTA2O94983 1202 aa20.95■□□□□ 0.94
THBS3-207ENST00000486260 SSFA2P28290 1259 aa20.95■□□□□ 0.94
THBS3-207ENST00000486260 METTL22Q9BUU2 404 aaPredicted RBP20.95■□□□□ 0.94
THBS3-207ENST00000486260 COG6Q9Y2V7 657 aa20.95■□□□□ 0.94
THBS3-207ENST00000486260 ERVV-1B6SEH8 477 aa20.95■□□□□ 0.94
THBS3-207ENST00000486260 ADRA2BP18089 450 aa20.95■□□□□ 0.94
THBS3-207ENST00000486260 SLC15A2Q16348 729 aa20.95■□□□□ 0.94
THBS3-207ENST00000486260 STK32BQ9NY57 414 aa20.95■□□□□ 0.94
THBS3-207ENST00000486260 RFC4P35249 363 aa20.94■□□□□ 0.94
THBS3-207ENST00000486260 BEND3Q5T5X7 828 aa20.94■□□□□ 0.94
THBS3-207ENST00000486260 INTS3Q68E01 1043 aaKnown RBP20.94■□□□□ 0.94
THBS3-207ENST00000486260 CRBNQ96SW2 442 aa20.94■□□□□ 0.94
THBS3-207ENST00000486260 MYD88Q99836 296 aa20.94■□□□□ 0.94
THBS3-207ENST00000486260 SRP68Q9UHB9 627 aaKnown RBP20.94■□□□□ 0.94
THBS3-207ENST00000486260 NARFQ9UHQ1 456 aa20.94■□□□□ 0.94
THBS3-207ENST00000486260 NEFLP07196 543 aa20.93■□□□□ 0.94
THBS3-207ENST00000486260 GIGYF2Q6Y7W6 1299 aaKnown RBP20.93■□□□□ 0.94
THBS3-207ENST00000486260 ITPRIPQ8IWB1 547 aa20.93■□□□□ 0.94
THBS3-207ENST00000486260 TUBGCP6Q96RT7 1819 aa20.93■□□□□ 0.94
THBS3-207ENST00000486260 PXDNLA1KZ92 1463 aa20.92■□□□□ 0.94
THBS3-207ENST00000486260 CCT4P50991 539 aaKnown RBP20.92■□□□□ 0.94
THBS3-207ENST00000486260 C4AP0C0L4 1744 aa20.92■□□□□ 0.94
THBS3-207ENST00000486260 ATP5J2-PTCD1G3V325 749 aa20.92■□□□□ 0.94
THBS3-207ENST00000486260 ZPR1O75312 459 aa20.92■□□□□ 0.94
THBS3-207ENST00000486260 NEXNQ0ZGT2 675 aa20.92■□□□□ 0.94
THBS3-207ENST00000486260 MVPQ14764 893 aaKnown RBP20.92■□□□□ 0.94
THBS3-207ENST00000486260 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
THBS3-207ENST00000486260 IGKV5-2P06315 115 aa20.91■□□□□ 0.94
THBS3-207ENST00000486260 TCIRG1Q13488 830 aa20.91■□□□□ 0.94
THBS3-207ENST00000486260 CWF19L2Q2TBE0 894 aaKnown RBP20.91■□□□□ 0.94
THBS3-207ENST00000486260 SRCIN1Q9C0H9 1055 aa20.91■□□□□ 0.94
THBS3-207ENST00000486260 USP42Q9H9J4 1324 aaKnown RBP20.91■□□□□ 0.94
THBS3-207ENST00000486260 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
THBS3-207ENST00000486260 COL23A1Q86Y22 540 aaPredicted RBP20.9■□□□□ 0.94
THBS3-207ENST00000486260 LINS1Q8NG48 757 aa20.9■□□□□ 0.94
THBS3-207ENST00000486260 PNPLA7Q6ZV29 1317 aa20.9■□□□□ 0.94
THBS3-207ENST00000486260 BCORQ6W2J9 1755 aa20.9■□□□□ 0.94
THBS3-207ENST00000486260 NUP98P52948 1817 aa20.9■□□□□ 0.94
THBS3-207ENST00000486260 FLAD1Q8NFF5 587 aa20.9■□□□□ 0.94
THBS3-207ENST00000486260 EXOC6Q8TAG9 804 aa20.9■□□□□ 0.94
THBS3-207ENST00000486260 BCL2L12Q9HB09 334 aa20.9■□□□□ 0.94
THBS3-207ENST00000486260 MSH5O43196 834 aa20.89■□□□□ 0.93
THBS3-207ENST00000486260 FKBP8Q14318 412 aa20.89■□□□□ 0.93
THBS3-207ENST00000486260 SCN7AQ01118 1682 aa20.89■□□□□ 0.93
THBS3-207ENST00000486260 NEURL1BA8MQ27 555 aa20.88■□□□□ 0.93
THBS3-207ENST00000486260 GPTP24298 496 aa20.88■□□□□ 0.93
THBS3-207ENST00000486260 HSP90AB3PQ58FF7 597 aa20.88■□□□□ 0.93
THBS3-207ENST00000486260 CLEC4GQ6UXB4 293 aa20.88■□□□□ 0.93
THBS3-207ENST00000486260 N4BP2Q86UW6 1770 aaPredicted RBP20.88■□□□□ 0.93
THBS3-207ENST00000486260 ISCA1Q9BUE6 129 aa20.88■□□□□ 0.93
THBS3-207ENST00000486260 ZNF652Q9Y2D9 606 aa20.88■□□□□ 0.93
THBS3-207ENST00000486260 ALDH1L1O75891 902 aa20.87■□□□□ 0.93
THBS3-207ENST00000486260 DDX19BQ9UMR2 479 aa20.87■□□□□ 0.93
THBS3-207ENST00000486260 ZNF34Q8IZ26 560 aa20.86■□□□□ 0.93
THBS3-207ENST00000486260 ZBTB7BO15156 539 aaPredicted RBP20.85■□□□□ 0.93
THBS3-207ENST00000486260 RGL2O15211 777 aa20.85■□□□□ 0.93
THBS3-207ENST00000486260 GYS1P13807 737 aa20.85■□□□□ 0.93
THBS3-207ENST00000486260 GCKRQ14397 625 aa20.85■□□□□ 0.93
THBS3-207ENST00000486260 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
THBS3-207ENST00000486260 ANKRD36CQ5JPF3 1778 aa20.85■□□□□ 0.93
THBS3-207ENST00000486260 TRIM28Q13263 835 aaKnown RBP20.85■□□□□ 0.93
THBS3-207ENST00000486260 TBC1D9BQ66K14 1250 aa20.85■□□□□ 0.93
THBS3-207ENST00000486260 CCDC191Q8NCU4 936 aa20.85■□□□□ 0.93
THBS3-207ENST00000486260 MEIS3Q99687 375 aa20.85■□□□□ 0.93
THBS3-207ENST00000486260 USP44Q9H0E7 712 aa20.85■□□□□ 0.93
THBS3-207ENST00000486260 NIP7Q9Y221 180 aaKnown RBP eCLIP20.85■□□□□ 0.93
THBS3-207ENST00000486260 QSER1Q2KHR3 1735 aa20.84■□□□□ 0.93
THBS3-207ENST00000486260 UBN2Q6ZU65 1347 aa20.84■□□□□ 0.93
THBS3-207ENST00000486260 BICDL1Q6ZP65 573 aa20.84■□□□□ 0.93
THBS3-207ENST00000486260 NLRP10Q86W26 655 aa20.84■□□□□ 0.93
THBS3-207ENST00000486260 CWC25Q9NXE8 425 aaPredicted RBP20.84■□□□□ 0.93
THBS3-207ENST00000486260 PELP1Q8IZL8 1130 aaKnown RBP20.82■□□□□ 0.92
THBS3-207ENST00000486260 PDGFDQ9GZP0 370 aaPredicted RBP20.82■□□□□ 0.92
THBS3-207ENST00000486260 C9orf78Q9NZ63 289 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms