RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CAMTA2O94983 1202 aa12.45□□□□□ -0.42
TMEM39A-208ENST00000486159 CFAP53Q96M91 514 aa12.45□□□□□ -0.42
TMEM39A-208ENST00000486159 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
TMEM39A-208ENST00000486159 DLEC1Q9Y238 1755 aa12.44□□□□□ -0.42
TMEM39A-208ENST00000486159 TOMM70O94826 608 aa12.44□□□□□ -0.42
TMEM39A-208ENST00000486159 PRR5LQ6MZQ0 368 aa12.44□□□□□ -0.42
TMEM39A-208ENST00000486159 COL11A2P13942 1736 aaPredicted RBP12.44□□□□□ -0.42
TMEM39A-208ENST00000486159 SCN7AQ01118 1682 aa12.44□□□□□ -0.42
TMEM39A-208ENST00000486159 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
TMEM39A-208ENST00000486159 NFKBIEO00221 500 aa12.43□□□□□ -0.42
TMEM39A-208ENST00000486159 IL6STP40189 918 aaPredicted RBP12.43□□□□□ -0.42
TMEM39A-208ENST00000486159 RALBP1Q15311 655 aa12.43□□□□□ -0.42
TMEM39A-208ENST00000486159 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-208ENST00000486159 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
TMEM39A-208ENST00000486159 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.42
TMEM39A-208ENST00000486159 THUMPD2Q9BTF0 503 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-208ENST00000486159 A0A087WZG4 1122 aa12.42□□□□□ -0.42
TMEM39A-208ENST00000486159 H0YIN7 160 aa12.42□□□□□ -0.42
TMEM39A-208ENST00000486159 C21orf2O43822 256 aa12.42□□□□□ -0.42
TMEM39A-208ENST00000486159 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
TMEM39A-208ENST00000486159 TTLL6Q8N841 843 aa12.42□□□□□ -0.42
TMEM39A-208ENST00000486159 NUDCQ9Y266 331 aa12.42□□□□□ -0.42
TMEM39A-208ENST00000486159 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
TMEM39A-208ENST00000486159 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
TMEM39A-208ENST00000486159 DLG5Q8TDM6 1919 aa12.41□□□□□ -0.42
TMEM39A-208ENST00000486159 DZIP3Q86Y13 1208 aaKnown RBP12.41□□□□□ -0.42
TMEM39A-208ENST00000486159 TEX13AQ9BXU3 409 aaPredicted RBP12.41□□□□□ -0.42
TMEM39A-208ENST00000486159 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
TMEM39A-208ENST00000486159 FAM177BA6PVY3 158 aa12.4□□□□□ -0.42
TMEM39A-208ENST00000486159 HLFQ16534 295 aa12.4□□□□□ -0.42
TMEM39A-208ENST00000486159 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
TMEM39A-208ENST00000486159 POTECB2RU33 542 aa12.39□□□□□ -0.43
TMEM39A-208ENST00000486159 SNRPA1P09661 255 aaKnown RBP12.39□□□□□ -0.43
TMEM39A-208ENST00000486159 LMNB1P20700 586 aa12.39□□□□□ -0.43
TMEM39A-208ENST00000486159 OLFM4Q6UX06 510 aa12.39□□□□□ -0.43
TMEM39A-208ENST00000486159 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
TMEM39A-208ENST00000486159 PLEKHF1Q96S99 279 aa12.39□□□□□ -0.43
TMEM39A-208ENST00000486159 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
TMEM39A-208ENST00000486159 BRIP1Q9BX63 1249 aa12.39□□□□□ -0.43
TMEM39A-208ENST00000486159 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
TMEM39A-208ENST00000486159 SLC51AQ86UW1 340 aa12.38□□□□□ -0.43
TMEM39A-208ENST00000486159 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
TMEM39A-208ENST00000486159 APLP1P51693 650 aa12.37□□□□□ -0.43
TMEM39A-208ENST00000486159 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
TMEM39A-208ENST00000486159 RBM46Q8TBY0 533 aaKnown RBP12.37□□□□□ -0.43
TMEM39A-208ENST00000486159 FER1L6Q2WGJ9 1857 aa12.37□□□□□ -0.43
TMEM39A-208ENST00000486159 WDR90Q96KV7 1748 aa12.37□□□□□ -0.43
TMEM39A-208ENST00000486159 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
TMEM39A-208ENST00000486159 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
TMEM39A-208ENST00000486159 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
TMEM39A-208ENST00000486159 SRGNP10124 158 aa12.36□□□□□ -0.43
TMEM39A-208ENST00000486159 PDE6BP35913 854 aa12.36□□□□□ -0.43
TMEM39A-208ENST00000486159 TTLL7Q6ZT98 887 aa12.36□□□□□ -0.43
TMEM39A-208ENST00000486159 C16orf71Q8IYS4 520 aaPredicted RBP12.36□□□□□ -0.43
TMEM39A-208ENST00000486159 MRS2Q9HD23 443 aa12.36□□□□□ -0.43
TMEM39A-208ENST00000486159 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-208ENST00000486159 NPHP1O15259 732 aa12.35□□□□□ -0.43
TMEM39A-208ENST00000486159 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-208ENST00000486159 PRPF40BQ6NWY9 871 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-208ENST00000486159 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-208ENST00000486159 NBPF5PQ86XG9 351 aaPredicted RBP12.35□□□□□ -0.43
TMEM39A-208ENST00000486159 NIP7Q9Y221 180 aaKnown RBP eCLIP12.35□□□□□ -0.43
TMEM39A-208ENST00000486159 KDM3BQ7LBC6 1761 aa12.35□□□□□ -0.43
TMEM39A-208ENST00000486159 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
TMEM39A-208ENST00000486159 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
TMEM39A-208ENST00000486159 EIF4A1P60842 406 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-208ENST00000486159 ST5P78524 1137 aa12.34□□□□□ -0.43
TMEM39A-208ENST00000486159 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
TMEM39A-208ENST00000486159 RRP7AQ9Y3A4 280 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-208ENST00000486159 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 DDNO94850 711 aaPredicted RBP12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 MYL6BP14649 208 aa12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 STYK1Q6J9G0 422 aa12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 NUTM1Q86Y26 1132 aa12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 C7orf43Q8WVR3 580 aa12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 LAMB4A4D0S4 1761 aa12.33□□□□□ -0.44
TMEM39A-208ENST00000486159 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 ANXA1P04083 346 aa12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 VEGFAP15692 232 aaPredicted RBP12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 FSTL1Q12841 308 aa12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 CLEC4GQ6UXB4 293 aa12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 CNKSR1Q969H4 720 aa12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 NUP98P52948 1817 aa12.32□□□□□ -0.44
TMEM39A-208ENST00000486159 ABCC12Q96J65 1359 aa12.31□□□□□ -0.44
TMEM39A-208ENST00000486159 GPTP24298 496 aa12.31□□□□□ -0.44
TMEM39A-208ENST00000486159 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
TMEM39A-208ENST00000486159 ZNF428Q96B54 188 aa12.31□□□□□ -0.44
TMEM39A-208ENST00000486159 TAOK3Q9H2K8 898 aa12.31□□□□□ -0.44
TMEM39A-208ENST00000486159 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
TMEM39A-208ENST00000486159 UBN2Q6ZU65 1347 aa12.31□□□□□ -0.44
TMEM39A-208ENST00000486159 KLRG2A4D1S0 409 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-208ENST00000486159 KRT24Q2M2I5 525 aa12.3□□□□□ -0.44
TMEM39A-208ENST00000486159 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
TMEM39A-208ENST00000486159 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms