RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 NOS2P35228 1153 aa9.16□□□□□ -0.94
GCFC2-209ENST00000486016 PSME1Q06323 249 aa9.16□□□□□ -0.94
GCFC2-209ENST00000486016 POTEAQ6S8J7 498 aa9.16□□□□□ -0.94
GCFC2-209ENST00000486016 CLUAP1Q96AJ1 413 aa9.16□□□□□ -0.94
GCFC2-209ENST00000486016 BTBD6Q96KE9 485 aa9.16□□□□□ -0.94
GCFC2-209ENST00000486016 DCDC2BA2VCK2 349 aa9.15□□□□□ -0.94
GCFC2-209ENST00000486016 EPXP11678 715 aa9.15□□□□□ -0.94
GCFC2-209ENST00000486016 TBCELQ5QJ74 424 aa9.15□□□□□ -0.94
GCFC2-209ENST00000486016 CCDC102BQ68D86 513 aa9.15□□□□□ -0.94
GCFC2-209ENST00000486016 TPCN2Q8NHX9 752 aa9.15□□□□□ -0.94
GCFC2-209ENST00000486016 CD33P20138 364 aa9.14□□□□□ -0.95
GCFC2-209ENST00000486016 DGKGP49619 791 aa9.14□□□□□ -0.95
GCFC2-209ENST00000486016 SH3PXD2AQ5TCZ1 1133 aa9.14□□□□□ -0.95
GCFC2-209ENST00000486016 LARGE2Q8N3Y3 721 aa9.14□□□□□ -0.95
GCFC2-209ENST00000486016 STRN4Q9NRL3 753 aa9.14□□□□□ -0.95
GCFC2-209ENST00000486016 M0R2N6 131 aa9.13□□□□□ -0.95
GCFC2-209ENST00000486016 ATP1A2P50993 1020 aa9.13□□□□□ -0.95
GCFC2-209ENST00000486016 SIX5Q8N196 739 aa9.13□□□□□ -0.95
GCFC2-209ENST00000486016 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
GCFC2-209ENST00000486016 AVENQ9NQS1 362 aaPredicted RBP9.13□□□□□ -0.95
GCFC2-209ENST00000486016 MKRN1Q9UHC7 482 aaKnown RBP9.13□□□□□ -0.95
GCFC2-209ENST00000486016 NEURL1BA8MQ27 555 aa9.12□□□□□ -0.95
GCFC2-209ENST00000486016 KHNYNO15037 678 aaKnown RBP9.12□□□□□ -0.95
GCFC2-209ENST00000486016 FCHSD1Q86WN1 690 aa9.12□□□□□ -0.95
GCFC2-209ENST00000486016 PROSER2Q86WR7 435 aaPredicted RBP9.12□□□□□ -0.95
GCFC2-209ENST00000486016 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
GCFC2-209ENST00000486016 PALM3A6NDB9 673 aaPredicted RBP9.11□□□□□ -0.95
GCFC2-209ENST00000486016 HIRAP54198 1017 aaPredicted RBP9.11□□□□□ -0.95
GCFC2-209ENST00000486016 LAMC2Q13753 1193 aa9.11□□□□□ -0.95
GCFC2-209ENST00000486016 GLMNQ92990 594 aa9.11□□□□□ -0.95
GCFC2-209ENST00000486016 MDFIQ99750 246 aa9.11□□□□□ -0.95
GCFC2-209ENST00000486016 TSPAN10Q9H1Z9 355 aaPredicted RBP9.11□□□□□ -0.95
GCFC2-209ENST00000486016 GPC6Q9Y625 555 aaPredicted RBP9.11□□□□□ -0.95
GCFC2-209ENST00000486016 SERTM1A2A2V5 107 aa9.1□□□□□ -0.95
GCFC2-209ENST00000486016 C21orf2O43822 256 aa9.1□□□□□ -0.95
GCFC2-209ENST00000486016 ADH6P28332 368 aa9.1□□□□□ -0.95
GCFC2-209ENST00000486016 BICDL1Q6ZP65 573 aa9.1□□□□□ -0.95
GCFC2-209ENST00000486016 TFIP11Q9UBB9 837 aaKnown RBP9.1□□□□□ -0.95
GCFC2-209ENST00000486016 A6NJR5 290 aa9.09□□□□□ -0.95
GCFC2-209ENST00000486016 GATA4P43694 442 aa9.09□□□□□ -0.95
GCFC2-209ENST00000486016 LCE3BQ5TA77 95 aa9.09□□□□□ -0.95
GCFC2-209ENST00000486016 ZNF468Q5VIY5 522 aaPredicted RBP9.09□□□□□ -0.95
GCFC2-209ENST00000486016 C1orf53Q5VUE5 145 aa9.09□□□□□ -0.95
GCFC2-209ENST00000486016 MARK1Q9P0L2 795 aa9.09□□□□□ -0.95
GCFC2-209ENST00000486016 MAFBQ9Y5Q3 323 aaPredicted RBP9.09□□□□□ -0.95
GCFC2-209ENST00000486016 PSMA6P60900 246 aaKnown RBP9.08□□□□□ -0.96
GCFC2-209ENST00000486016 LRRC69Q6ZNQ3 347 aa9.08□□□□□ -0.96
GCFC2-209ENST00000486016 TSEN2Q8NCE0 465 aaKnown RBP9.08□□□□□ -0.96
GCFC2-209ENST00000486016 ZNF232Q9UNY5 417 aa9.08□□□□□ -0.96
GCFC2-209ENST00000486016 GJA3Q9Y6H8 435 aa9.08□□□□□ -0.96
GCFC2-209ENST00000486016 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
GCFC2-209ENST00000486016 PCBP4P57723 403 aaKnown RBP9.07□□□□□ -0.96
GCFC2-209ENST00000486016 CHSY3Q70JA7 882 aa9.07□□□□□ -0.96
GCFC2-209ENST00000486016 ZNF594Q96JF6 807 aaPredicted RBP9.06□□□□□ -0.96
GCFC2-209ENST00000486016 SFSWAPQ12872 951 aaKnown RBP9.05□□□□□ -0.96
GCFC2-209ENST00000486016 FOXD4L6Q3SYB3 417 aaPredicted RBP9.05□□□□□ -0.96
GCFC2-209ENST00000486016 KANK4Q5T7N3 995 aaPredicted RBP9.05□□□□□ -0.96
GCFC2-209ENST00000486016 FOXD4L3Q6VB84 417 aaPredicted RBP9.05□□□□□ -0.96
GCFC2-209ENST00000486016 STAG2Q8N3U4 1231 aa9.05□□□□□ -0.96
GCFC2-209ENST00000486016 KRTAP4-12Q9BQ66 201 aa9.05□□□□□ -0.96
GCFC2-209ENST00000486016 HCN4Q9Y3Q4 1203 aa9.05□□□□□ -0.96
GCFC2-209ENST00000486016 RASA1P20936 1047 aa9.04□□□□□ -0.96
GCFC2-209ENST00000486016 PPP1R12CQ9BZL4 782 aa9.04□□□□□ -0.96
GCFC2-209ENST00000486016 PHACTR1Q9C0D0 580 aa9.04□□□□□ -0.96
GCFC2-209ENST00000486016 SPATA31C1P0DKV0 1188 aa9.03□□□□□ -0.96
GCFC2-209ENST00000486016 RSPO4Q2I0M5 234 aaPredicted RBP9.03□□□□□ -0.96
GCFC2-209ENST00000486016 ZNF280CQ8ND82 737 aa9.03□□□□□ -0.96
GCFC2-209ENST00000486016 RHPN1Q8TCX5 695 aa9.03□□□□□ -0.96
GCFC2-209ENST00000486016 SLC30A3Q99726 388 aa9.03□□□□□ -0.96
GCFC2-209ENST00000486016 C2orf49Q9BVC5 232 aaPredicted RBP9.03□□□□□ -0.96
GCFC2-209ENST00000486016 PRR12Q9ULL5 1215 aa9.03□□□□□ -0.96
GCFC2-209ENST00000486016 ATAD2Q6PL18 1390 aa9.02□□□□□ -0.97
GCFC2-209ENST00000486016 SIN3BO75182 1162 aa9.02□□□□□ -0.97
GCFC2-209ENST00000486016 KCNQ4P56696 695 aa9.02□□□□□ -0.97
GCFC2-209ENST00000486016 PTK7Q13308 1070 aa9.02□□□□□ -0.97
GCFC2-209ENST00000486016 CRTC2Q53ET0 693 aaPredicted RBP9.02□□□□□ -0.97
GCFC2-209ENST00000486016 SYT9Q86SS6 491 aa9.02□□□□□ -0.97
GCFC2-209ENST00000486016 TRIM11Q96F44 468 aa9.02□□□□□ -0.97
GCFC2-209ENST00000486016 HSH2DQ96JZ2 352 aa9.02□□□□□ -0.97
GCFC2-209ENST00000486016 PLVAPQ9BX97 442 aa9.02□□□□□ -0.97
GCFC2-209ENST00000486016 PPP1R12BO60237 982 aaPredicted RBP9.01□□□□□ -0.97
GCFC2-209ENST00000486016 SEC13P55735 322 aa9.01□□□□□ -0.97
GCFC2-209ENST00000486016 SUSD3Q96L08 255 aa9.01□□□□□ -0.97
GCFC2-209ENST00000486016 ELOA3CA0A087WX78 387 aaPredicted RBP9□□□□□ -0.97
GCFC2-209ENST00000486016 ELOA3DA6NLF2 546 aaPredicted RBP9□□□□□ -0.97
GCFC2-209ENST00000486016 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
GCFC2-209ENST00000486016 TYRO3Q06418 890 aa9□□□□□ -0.97
GCFC2-209ENST00000486016 ELOA3BQ3SY89 546 aa9□□□□□ -0.97
GCFC2-209ENST00000486016 ELOA3Q8NG57 546 aa9□□□□□ -0.97
GCFC2-209ENST00000486016 GAS2L2Q8NHY3 880 aa9□□□□□ -0.97
GCFC2-209ENST00000486016 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
GCFC2-209ENST00000486016 ZFP64Q9NPA5 681 aa9□□□□□ -0.97
GCFC2-209ENST00000486016 NKAPLQ5M9Q1 402 aa8.99□□□□□ -0.97
GCFC2-209ENST00000486016 ALDH16A1Q8IZ83 802 aa8.99□□□□□ -0.97
GCFC2-209ENST00000486016 TNFRSF25Q93038 417 aa8.99□□□□□ -0.97
GCFC2-209ENST00000486016 NEUROD4Q9HD90 331 aa8.99□□□□□ -0.97
GCFC2-209ENST00000486016 ANKIB1Q9P2G1 1089 aa8.99□□□□□ -0.97
GCFC2-209ENST00000486016 DPYDQ12882 1025 aa8.98□□□□□ -0.97
GCFC2-209ENST00000486016 COL9A3Q14050 684 aaPredicted RBP8.98□□□□□ -0.97
GCFC2-209ENST00000486016 ARTNQ5T4W7 220 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms