RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 AIMP1Q12904 312 aaKnown RBP16.22■□□□□ 0.19
PTCD1-205ENST00000485746 HLFQ16534 295 aa16.22■□□□□ 0.19
PTCD1-205ENST00000485746 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
PTCD1-205ENST00000485746 ZBTB3Q9H5J0 574 aa16.22■□□□□ 0.19
PTCD1-205ENST00000485746 KDM3BQ7LBC6 1761 aa16.22■□□□□ 0.19
PTCD1-205ENST00000485746 MAP3K15Q6ZN16 1313 aa16.21■□□□□ 0.19
PTCD1-205ENST00000485746 H0YIN7 160 aa16.21■□□□□ 0.19
PTCD1-205ENST00000485746 ELL2O00472 640 aaPredicted RBP16.21■□□□□ 0.19
PTCD1-205ENST00000485746 ZNF853P0CG23 659 aa16.21■□□□□ 0.19
PTCD1-205ENST00000485746 PDE6BP35913 854 aa16.21■□□□□ 0.19
PTCD1-205ENST00000485746 CCDC27Q2M243 656 aa16.21■□□□□ 0.19
PTCD1-205ENST00000485746 DALRD3Q5D0E6 543 aaKnown RBP16.21■□□□□ 0.19
PTCD1-205ENST00000485746 C2CD5Q86YS7 1000 aa16.21■□□□□ 0.19
PTCD1-205ENST00000485746 WWC1Q8IX03 1113 aa16.21■□□□□ 0.19
PTCD1-205ENST00000485746 PXDNLA1KZ92 1463 aa16.21■□□□□ 0.19
PTCD1-205ENST00000485746 RGL2O15211 777 aa16.2■□□□□ 0.18
PTCD1-205ENST00000485746 HOXB7P09629 217 aa16.2■□□□□ 0.18
PTCD1-205ENST00000485746 PRR5LQ6MZQ0 368 aa16.2■□□□□ 0.18
PTCD1-205ENST00000485746 TPTE2Q6XPS3 522 aa16.2■□□□□ 0.18
PTCD1-205ENST00000485746 PROSER3Q2NL68 480 aa16.19■□□□□ 0.18
PTCD1-205ENST00000485746 ARHGAP27Q6ZUM4 889 aa16.19■□□□□ 0.18
PTCD1-205ENST00000485746 COPS6Q7L5N1 327 aa16.19■□□□□ 0.18
PTCD1-205ENST00000485746 XAGE3Q8WTP9 111 aa16.19■□□□□ 0.18
PTCD1-205ENST00000485746 ZNF622Q969S3 477 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTCD1-205ENST00000485746 CHMP4AQ9BY43 222 aa16.19■□□□□ 0.18
PTCD1-205ENST00000485746 DDX21Q9NR30 783 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTCD1-205ENST00000485746 CHPF2Q9P2E5 772 aa16.19■□□□□ 0.18
PTCD1-205ENST00000485746 KCNA3P22001 575 aa16.18■□□□□ 0.18
PTCD1-205ENST00000485746 GPTP24298 496 aa16.18■□□□□ 0.18
PTCD1-205ENST00000485746 PDIA6Q15084 440 aa16.18■□□□□ 0.18
PTCD1-205ENST00000485746 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
PTCD1-205ENST00000485746 BRIP1Q9BX63 1249 aa16.18■□□□□ 0.18
PTCD1-205ENST00000485746 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
PTCD1-205ENST00000485746 PDZRN3Q9UPQ7 1066 aa16.18■□□□□ 0.18
PTCD1-205ENST00000485746 TSR2Q969E8 191 aaKnown RBP16.17■□□□□ 0.18
PTCD1-205ENST00000485746 NYXQ9GZU5 481 aa16.17■□□□□ 0.18
PTCD1-205ENST00000485746 GIGYF2Q6Y7W6 1299 aaKnown RBP16.16■□□□□ 0.18
PTCD1-205ENST00000485746 WDR63Q8IWG1 891 aa16.16■□□□□ 0.18
PTCD1-205ENST00000485746 TTLL6Q8N841 843 aa16.16■□□□□ 0.18
PTCD1-205ENST00000485746 C8orf58Q8NAV2 365 aa16.16■□□□□ 0.18
PTCD1-205ENST00000485746 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
PTCD1-205ENST00000485746 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
PTCD1-205ENST00000485746 HSP90AB3PQ58FF7 597 aa16.15■□□□□ 0.18
PTCD1-205ENST00000485746 PPP1R42Q7Z4L9 355 aa16.15■□□□□ 0.18
PTCD1-205ENST00000485746 IL16Q14005 1332 aa16.15■□□□□ 0.18
PTCD1-205ENST00000485746 SCN7AQ01118 1682 aa16.14■□□□□ 0.18
PTCD1-205ENST00000485746 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.17
PTCD1-205ENST00000485746 CCER2I3L3R5 266 aa16.13■□□□□ 0.17
PTCD1-205ENST00000485746 PARP10Q53GL7 1025 aa16.13■□□□□ 0.17
PTCD1-205ENST00000485746 DIEXFQ68CQ4 756 aaKnown RBP16.13■□□□□ 0.17
PTCD1-205ENST00000485746 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
PTCD1-205ENST00000485746 LRP10Q7Z4F1 713 aa16.13■□□□□ 0.17
PTCD1-205ENST00000485746 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
PTCD1-205ENST00000485746 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
PTCD1-205ENST00000485746 SUSD4Q5VX71 490 aa16.12■□□□□ 0.17
PTCD1-205ENST00000485746 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
PTCD1-205ENST00000485746 NUTM1Q86Y26 1132 aa16.12■□□□□ 0.17
PTCD1-205ENST00000485746 ZNF34Q8IZ26 560 aa16.12■□□□□ 0.17
PTCD1-205ENST00000485746 TSPYL6Q8N831 410 aa16.12■□□□□ 0.17
PTCD1-205ENST00000485746 CNKSR1Q969H4 720 aa16.12■□□□□ 0.17
PTCD1-205ENST00000485746 STK31Q9BXU1 1019 aa16.12■□□□□ 0.17
PTCD1-205ENST00000485746 N4BP2Q86UW6 1770 aaPredicted RBP16.12■□□□□ 0.17
PTCD1-205ENST00000485746 TCIRG1Q13488 830 aa16.11■□□□□ 0.17
PTCD1-205ENST00000485746 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
PTCD1-205ENST00000485746 ERFEQ4G0M1 354 aa16.11■□□□□ 0.17
PTCD1-205ENST00000485746 PLBD2Q8NHP8 589 aa16.11■□□□□ 0.17
PTCD1-205ENST00000485746 MASTLQ96GX5 879 aa16.11■□□□□ 0.17
PTCD1-205ENST00000485746 UTP14AQ9BVJ6 771 aaKnown RBP16.11■□□□□ 0.17
PTCD1-205ENST00000485746 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
PTCD1-205ENST00000485746 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
PTCD1-205ENST00000485746 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
PTCD1-205ENST00000485746 NPR1P16066 1061 aa16.1■□□□□ 0.17
PTCD1-205ENST00000485746 STYK1Q6J9G0 422 aa16.1■□□□□ 0.17
PTCD1-205ENST00000485746 ZNF784Q8NCA9 323 aaPredicted RBP16.1■□□□□ 0.17
PTCD1-205ENST00000485746 UBN2Q6ZU65 1347 aa16.1■□□□□ 0.17
PTCD1-205ENST00000485746 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
PTCD1-205ENST00000485746 TCERG1O14776 1098 aaKnown RBP16.09■□□□□ 0.17
PTCD1-205ENST00000485746 DDX58O95786 925 aaKnown RBP16.09■□□□□ 0.17
PTCD1-205ENST00000485746 SRGNP10124 158 aa16.09■□□□□ 0.17
PTCD1-205ENST00000485746 PHAXQ9H814 394 aaKnown RBP16.09■□□□□ 0.17
PTCD1-205ENST00000485746 AFDNP55196 1824 aaKnown RBP16.09■□□□□ 0.17
PTCD1-205ENST00000485746 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
PTCD1-205ENST00000485746 NRXN2Q9P2S2 1712 aa16.08■□□□□ 0.17
PTCD1-205ENST00000485746 C21orf2O43822 256 aa16.08■□□□□ 0.16
PTCD1-205ENST00000485746 EXOSC9Q06265 439 aaKnown RBP16.08■□□□□ 0.16
PTCD1-205ENST00000485746 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
PTCD1-205ENST00000485746 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
PTCD1-205ENST00000485746 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
PTCD1-205ENST00000485746 NTSR2O95665 410 aa16.07■□□□□ 0.16
PTCD1-205ENST00000485746 ALDH1B1P30837 517 aa16.07■□□□□ 0.16
PTCD1-205ENST00000485746 NLRP10Q86W26 655 aa16.07■□□□□ 0.16
PTCD1-205ENST00000485746 ZNF428Q96B54 188 aa16.07■□□□□ 0.16
PTCD1-205ENST00000485746 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
PTCD1-205ENST00000485746 C9orf131Q5VYM1 1079 aa16.06■□□□□ 0.16
PTCD1-205ENST00000485746 PRPF40BQ6NWY9 871 aaKnown RBP16.06■□□□□ 0.16
PTCD1-205ENST00000485746 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
PTCD1-205ENST00000485746 RBM17Q96I25 401 aaKnown RBP16.06■□□□□ 0.16
PTCD1-205ENST00000485746 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
PTCD1-205ENST00000485746 KIAA1551Q9HCM1 1747 aa16.05■□□□□ 0.16
PTCD1-205ENST00000485746 IBTKQ9P2D0 1353 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms