RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 CCDC136Q96JN2 1154 aa20.37■□□□□ 0.85
ZNF248-206ENST00000485560 ATP10DQ9P241 1426 aa20.37■□□□□ 0.85
ZNF248-206ENST00000485560 AFDNP55196 1824 aaKnown RBP20.37■□□□□ 0.85
ZNF248-206ENST00000485560 SRCIN1Q9C0H9 1055 aa20.36■□□□□ 0.85
ZNF248-206ENST00000485560 LRRC4BQ9NT99 713 aa20.36■□□□□ 0.85
ZNF248-206ENST00000485560 C4BP0C0L5 1744 aa20.35■□□□□ 0.85
ZNF248-206ENST00000485560 CNTNAP4Q9C0A0 1308 aa20.35■□□□□ 0.85
ZNF248-206ENST00000485560 EIF5P55010 431 aaKnown RBP20.35■□□□□ 0.85
ZNF248-206ENST00000485560 METTL22Q9BUU2 404 aaPredicted RBP20.35■□□□□ 0.85
ZNF248-206ENST00000485560 CHMP4BQ9H444 224 aaKnown RBP20.35■□□□□ 0.85
ZNF248-206ENST00000485560 ZBTB3Q9H5J0 574 aa20.35■□□□□ 0.85
ZNF248-206ENST00000485560 APBA3O96018 575 aa20.34■□□□□ 0.85
ZNF248-206ENST00000485560 MEIS3Q99687 375 aa20.34■□□□□ 0.85
ZNF248-206ENST00000485560 NUP98P52948 1817 aa20.34■□□□□ 0.85
ZNF248-206ENST00000485560 ARXQ96QS3 562 aa20.33■□□□□ 0.85
ZNF248-206ENST00000485560 MYD88Q99836 296 aa20.33■□□□□ 0.85
ZNF248-206ENST00000485560 PCDHB15Q9Y5E8 787 aa20.33■□□□□ 0.85
ZNF248-206ENST00000485560 CWF19L2Q2TBE0 894 aaKnown RBP20.33■□□□□ 0.84
ZNF248-206ENST00000485560 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.84
ZNF248-206ENST00000485560 KIF6Q6ZMV9 814 aa20.33■□□□□ 0.84
ZNF248-206ENST00000485560 LINS1Q8NG48 757 aa20.33■□□□□ 0.84
ZNF248-206ENST00000485560 PLSCR1O15162 318 aa20.32■□□□□ 0.84
ZNF248-206ENST00000485560 IGKV5-2P06315 115 aa20.32■□□□□ 0.84
ZNF248-206ENST00000485560 NEXNQ0ZGT2 675 aa20.32■□□□□ 0.84
ZNF248-206ENST00000485560 SLC27A3Q5K4L6 730 aa20.32■□□□□ 0.84
ZNF248-206ENST00000485560 PROM2Q8N271 834 aa20.32■□□□□ 0.84
ZNF248-206ENST00000485560 C1orf115Q9H7X2 142 aa20.32■□□□□ 0.84
ZNF248-206ENST00000485560 MAP3K15Q6ZN16 1313 aa20.31■□□□□ 0.84
ZNF248-206ENST00000485560 ALDH1L1O75891 902 aa20.31■□□□□ 0.84
ZNF248-206ENST00000485560 TXNRD1Q16881 649 aa20.31■□□□□ 0.84
ZNF248-206ENST00000485560 NPM2Q86SE8 214 aaKnown RBP20.31■□□□□ 0.84
ZNF248-206ENST00000485560 DZIP3Q86Y13 1208 aaKnown RBP20.31■□□□□ 0.84
ZNF248-206ENST00000485560 USP44Q9H0E7 712 aa20.31■□□□□ 0.84
ZNF248-206ENST00000485560 TBC1D2BQ9UPU7 963 aa20.31■□□□□ 0.84
ZNF248-206ENST00000485560 RGPD3A6NKT7 1758 aaPredicted RBP20.3■□□□□ 0.84
ZNF248-206ENST00000485560 ANKRD36CQ5JPF3 1778 aa20.3■□□□□ 0.84
ZNF248-206ENST00000485560 RGPD4Q7Z3J3 1758 aa20.3■□□□□ 0.84
ZNF248-206ENST00000485560 COL15A1P39059 1388 aa20.3■□□□□ 0.84
ZNF248-206ENST00000485560 NEURL1BA8MQ27 555 aa20.29■□□□□ 0.84
ZNF248-206ENST00000485560 ATP5J2-PTCD1G3V325 749 aa20.29■□□□□ 0.84
ZNF248-206ENST00000485560 UBR3Q6ZT12 1888 aa20.29■□□□□ 0.84
ZNF248-206ENST00000485560 GNPATO15228 680 aa20.28■□□□□ 0.84
ZNF248-206ENST00000485560 RPS6KA4O75676 772 aa20.28■□□□□ 0.84
ZNF248-206ENST00000485560 HLFQ16534 295 aa20.28■□□□□ 0.84
ZNF248-206ENST00000485560 SMIM5Q71RC9 77 aa20.28■□□□□ 0.84
ZNF248-206ENST00000485560 BCORQ6W2J9 1755 aa20.28■□□□□ 0.84
ZNF248-206ENST00000485560 GNAI3P08754 354 aa20.27■□□□□ 0.84
ZNF248-206ENST00000485560 GIGYF2Q6Y7W6 1299 aaKnown RBP20.27■□□□□ 0.84
ZNF248-206ENST00000485560 NBPF7P0C2Y1 421 aaPredicted RBP20.27■□□□□ 0.83
ZNF248-206ENST00000485560 TCIRG1Q13488 830 aa20.27■□□□□ 0.83
ZNF248-206ENST00000485560 ERVV-1B6SEH8 477 aa20.26■□□□□ 0.83
ZNF248-206ENST00000485560 IGHDP01880 384 aa20.26■□□□□ 0.83
ZNF248-206ENST00000485560 GCKRQ14397 625 aa20.26■□□□□ 0.83
ZNF248-206ENST00000485560 AMIGO3Q86WK7 504 aa20.26■□□□□ 0.83
ZNF248-206ENST00000485560 C9orf78Q9NZ63 289 aaPredicted RBP20.26■□□□□ 0.83
ZNF248-206ENST00000485560 C4AP0C0L4 1744 aa20.26■□□□□ 0.83
ZNF248-206ENST00000485560 IBTKQ9P2D0 1353 aaPredicted RBP20.25■□□□□ 0.83
ZNF248-206ENST00000485560 UBTFL1P0CB47 393 aaPredicted RBP20.25■□□□□ 0.83
ZNF248-206ENST00000485560 AK7Q96M32 723 aa20.25■□□□□ 0.83
ZNF248-206ENST00000485560 RTCBQ9Y3I0 505 aaKnown RBP20.25■□□□□ 0.83
ZNF248-206ENST00000485560 A0A087WZG4 1122 aa20.24■□□□□ 0.83
ZNF248-206ENST00000485560 GRM8O00222 908 aa20.24■□□□□ 0.83
ZNF248-206ENST00000485560 CAMTA2O94983 1202 aa20.24■□□□□ 0.83
ZNF248-206ENST00000485560 GNAI2P04899 355 aa20.24■□□□□ 0.83
ZNF248-206ENST00000485560 ISCA1Q9BUE6 129 aa20.24■□□□□ 0.83
ZNF248-206ENST00000485560 UTYO14607 1347 aa20.23■□□□□ 0.83
ZNF248-206ENST00000485560 KDM2BQ8NHM5 1336 aa20.23■□□□□ 0.83
ZNF248-206ENST00000485560 SCN7AQ01118 1682 aa20.23■□□□□ 0.83
ZNF248-206ENST00000485560 LRRFIP2Q9Y608 721 aaKnown RBP20.23■□□□□ 0.83
ZNF248-206ENST00000485560 HSP90AB3PQ58FF7 597 aa20.22■□□□□ 0.83
ZNF248-206ENST00000485560 SIRT2Q8IXJ6 389 aa20.22■□□□□ 0.83
ZNF248-206ENST00000485560 CCDC191Q8NCU4 936 aa20.22■□□□□ 0.83
ZNF248-206ENST00000485560 CWC25Q9NXE8 425 aaPredicted RBP20.22■□□□□ 0.83
ZNF248-206ENST00000485560 CEP85Q6P2H3 762 aa20.22■□□□□ 0.83
ZNF248-206ENST00000485560 TUBGCP6Q96RT7 1819 aa20.21■□□□□ 0.83
ZNF248-206ENST00000485560 PHF14O94880 888 aa20.21■□□□□ 0.83
ZNF248-206ENST00000485560 GPTP24298 496 aa20.21■□□□□ 0.83
ZNF248-206ENST00000485560 EN1Q05925 392 aaPredicted RBP20.21■□□□□ 0.83
ZNF248-206ENST00000485560 TRIM28Q13263 835 aaKnown RBP20.21■□□□□ 0.83
ZNF248-206ENST00000485560 HDAC1Q13547 482 aaPredicted RBP20.21■□□□□ 0.83
ZNF248-206ENST00000485560 JARID2Q92833 1246 aaPredicted RBP20.21■□□□□ 0.83
ZNF248-206ENST00000485560 ARHGEF1Q92888 912 aaKnown RBP20.21■□□□□ 0.83
ZNF248-206ENST00000485560 RWDD1Q9H446 243 aaPredicted RBP20.21■□□□□ 0.83
ZNF248-206ENST00000485560 HMGB2P26583 209 aaKnown RBP20.2■□□□□ 0.82
ZNF248-206ENST00000485560 EZH2Q15910 746 aaKnown RBP20.2■□□□□ 0.82
ZNF248-206ENST00000485560 CENPQQ7L2Z9 268 aaPredicted RBP20.2■□□□□ 0.82
ZNF248-206ENST00000485560 RPAP2Q8IXW5 612 aaPredicted RBP20.2■□□□□ 0.82
ZNF248-206ENST00000485560 ANKRD44Q8N8A2 993 aa20.2■□□□□ 0.82
ZNF248-206ENST00000485560 CAMKK2Q96RR4 588 aa20.2■□□□□ 0.82
ZNF248-206ENST00000485560 NARFQ9UHQ1 456 aa20.2■□□□□ 0.82
ZNF248-206ENST00000485560 SF3B2Q13435 895 aaKnown RBP20.19■□□□□ 0.82
ZNF248-206ENST00000485560 TRAPPC3LQ5T215 181 aa20.19■□□□□ 0.82
ZNF248-206ENST00000485560 ZNF34Q8IZ26 560 aa20.19■□□□□ 0.82
ZNF248-206ENST00000485560 UBE3BQ7Z3V4 1068 aa20.19■□□□□ 0.82
ZNF248-206ENST00000485560 NLRP10Q86W26 655 aa20.19■□□□□ 0.82
ZNF248-206ENST00000485560 SUCLG2Q96I99 432 aa20.19■□□□□ 0.82
ZNF248-206ENST00000485560 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
ZNF248-206ENST00000485560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
ZNF248-206ENST00000485560 H7C1W4 665 aa20.18■□□□□ 0.82
ZNF248-206ENST00000485560 CASP7P55210 303 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms