RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 BCS1LQ9Y276 419 aa15.84■□□□□ 0.13
TRA2B-213ENST00000485530 BRCA1P38398 1863 aaKnown RBP15.84■□□□□ 0.13
TRA2B-213ENST00000485530 PCNTO95613 3336 aa15.84■□□□□ 0.13
TRA2B-213ENST00000485530 CAPN15O75808 1086 aa15.83■□□□□ 0.12
TRA2B-213ENST00000485530 ANXA1P04083 346 aa15.83■□□□□ 0.12
TRA2B-213ENST00000485530 EIF5P55010 431 aaKnown RBP15.83■□□□□ 0.12
TRA2B-213ENST00000485530 COL5A3P25940 1745 aaPredicted RBP15.82■□□□□ 0.12
TRA2B-213ENST00000485530 TCERG1O14776 1098 aaKnown RBP15.82■□□□□ 0.12
TRA2B-213ENST00000485530 TGFB2P61812 414 aa15.82■□□□□ 0.12
TRA2B-213ENST00000485530 TWISTNBQ3B726 338 aaPredicted RBP15.82■□□□□ 0.12
TRA2B-213ENST00000485530 ARHGEF1Q92888 912 aaKnown RBP15.82■□□□□ 0.12
TRA2B-213ENST00000485530 HOXB7P09629 217 aa15.81■□□□□ 0.12
TRA2B-213ENST00000485530 SOS1Q07889 1333 aaPredicted RBP15.81■□□□□ 0.12
TRA2B-213ENST00000485530 RTCBQ9Y3I0 505 aaKnown RBP15.81■□□□□ 0.12
TRA2B-213ENST00000485530 C4AP0C0L4 1744 aa15.8■□□□□ 0.12
TRA2B-213ENST00000485530 A0A0G2JLW4 131 aa15.8■□□□□ 0.12
TRA2B-213ENST00000485530 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
TRA2B-213ENST00000485530 HDGFL1Q5TGJ6 251 aa15.8■□□□□ 0.12
TRA2B-213ENST00000485530 ARHGAP27Q6ZUM4 889 aa15.8■□□□□ 0.12
TRA2B-213ENST00000485530 CHPF2Q9P2E5 772 aa15.8■□□□□ 0.12
TRA2B-213ENST00000485530 MYL6BP14649 208 aa15.79■□□□□ 0.12
TRA2B-213ENST00000485530 IL6STP40189 918 aaPredicted RBP15.79■□□□□ 0.12
TRA2B-213ENST00000485530 FSTL1Q12841 308 aa15.79■□□□□ 0.12
TRA2B-213ENST00000485530 TNS4Q8IZW8 715 aa15.79■□□□□ 0.12
TRA2B-213ENST00000485530 ARFGEF1Q9Y6D6 1849 aa15.79■□□□□ 0.12
TRA2B-213ENST00000485530 PRELPP51888 382 aa15.78■□□□□ 0.12
TRA2B-213ENST00000485530 C9orf131Q5VYM1 1079 aa15.78■□□□□ 0.12
TRA2B-213ENST00000485530 C16orf71Q8IYS4 520 aaPredicted RBP15.78■□□□□ 0.12
TRA2B-213ENST00000485530 DDX21Q9NR30 783 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRA2B-213ENST00000485530 SRP68Q9UHB9 627 aaKnown RBP15.78■□□□□ 0.12
TRA2B-213ENST00000485530 TBC1D2BQ9UPU7 963 aa15.78■□□□□ 0.12
TRA2B-213ENST00000485530 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
TRA2B-213ENST00000485530 DPEP1P16444 411 aa15.77■□□□□ 0.12
TRA2B-213ENST00000485530 TTLL7Q6ZT98 887 aa15.77■□□□□ 0.12
TRA2B-213ENST00000485530 BCL2L12Q9HB09 334 aa15.77■□□□□ 0.12
TRA2B-213ENST00000485530 G2E3Q7L622 706 aa15.76■□□□□ 0.11
TRA2B-213ENST00000485530 PHAXQ9H814 394 aaKnown RBP15.76■□□□□ 0.11
TRA2B-213ENST00000485530 DBF4Q9UBU7 674 aaPredicted RBP15.76■□□□□ 0.11
TRA2B-213ENST00000485530 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
TRA2B-213ENST00000485530 ERBB4Q15303 1308 aa15.75■□□□□ 0.11
TRA2B-213ENST00000485530 ADRA2BP18089 450 aa15.75■□□□□ 0.11
TRA2B-213ENST00000485530 CCDC30Q5VVM6 783 aa15.75■□□□□ 0.11
TRA2B-213ENST00000485530 COPS6Q7L5N1 327 aa15.75■□□□□ 0.11
TRA2B-213ENST00000485530 COL15A1P39059 1388 aa15.75■□□□□ 0.11
TRA2B-213ENST00000485530 CAMTA2O94983 1202 aa15.74■□□□□ 0.11
TRA2B-213ENST00000485530 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
TRA2B-213ENST00000485530 GYS1P13807 737 aa15.74■□□□□ 0.11
TRA2B-213ENST00000485530 KCNA3P22001 575 aa15.74■□□□□ 0.11
TRA2B-213ENST00000485530 RFC4P35249 363 aa15.74■□□□□ 0.11
TRA2B-213ENST00000485530 USPL1Q5W0Q7 1092 aa15.74■□□□□ 0.11
TRA2B-213ENST00000485530 NLGN1Q8N2Q7 840 aa15.74■□□□□ 0.11
TRA2B-213ENST00000485530 XAGE3Q8WTP9 111 aa15.74■□□□□ 0.11
TRA2B-213ENST00000485530 NARFQ9UHQ1 456 aa15.74■□□□□ 0.11
TRA2B-213ENST00000485530 KDM2BQ8NHM5 1336 aa15.73■□□□□ 0.11
TRA2B-213ENST00000485530 USP42Q9H9J4 1324 aaKnown RBP15.73■□□□□ 0.11
TRA2B-213ENST00000485530 AIMP1Q12904 312 aaKnown RBP15.73■□□□□ 0.11
TRA2B-213ENST00000485530 FKBP8Q14318 412 aa15.73■□□□□ 0.11
TRA2B-213ENST00000485530 HLFQ16534 295 aa15.73■□□□□ 0.11
TRA2B-213ENST00000485530 DZIP3Q86Y13 1208 aaKnown RBP15.73■□□□□ 0.11
TRA2B-213ENST00000485530 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
TRA2B-213ENST00000485530 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
TRA2B-213ENST00000485530 HYPKQ9NX55 129 aa15.72■□□□□ 0.11
TRA2B-213ENST00000485530 LAMB4A4D0S4 1761 aa15.72■□□□□ 0.11
TRA2B-213ENST00000485530 A0A087WZG4 1122 aa15.71■□□□□ 0.11
TRA2B-213ENST00000485530 RARSP54136 660 aaKnown RBP15.71■□□□□ 0.11
TRA2B-213ENST00000485530 RRAGCQ9HB90 399 aa15.71■□□□□ 0.11
TRA2B-213ENST00000485530 RNF181Q9P0P0 153 aa15.71■□□□□ 0.11
TRA2B-213ENST00000485530 ZPR1O75312 459 aa15.7■□□□□ 0.1
TRA2B-213ENST00000485530 TM4SF1P30408 202 aa15.7■□□□□ 0.1
TRA2B-213ENST00000485530 SMC1BQ8NDV3 1235 aa15.7■□□□□ 0.1
TRA2B-213ENST00000485530 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
TRA2B-213ENST00000485530 ZBTB3Q9H5J0 574 aa15.7■□□□□ 0.1
TRA2B-213ENST00000485530 PARP3Q9Y6F1 533 aa15.7■□□□□ 0.1
TRA2B-213ENST00000485530 SBF1O95248 1867 aa15.69■□□□□ 0.1
TRA2B-213ENST00000485530 CT47B1P0C2W7 299 aaPredicted RBP15.69■□□□□ 0.1
TRA2B-213ENST00000485530 HSPA1AP0DMV8 641 aaKnown RBP15.69■□□□□ 0.1
TRA2B-213ENST00000485530 HSPA1BP0DMV9 641 aaKnown RBP15.69■□□□□ 0.1
TRA2B-213ENST00000485530 ANKRD13DQ6ZTN6 518 aa15.69■□□□□ 0.1
TRA2B-213ENST00000485530 STK31Q9BXU1 1019 aa15.69■□□□□ 0.1
TRA2B-213ENST00000485530 PIM2Q9P1W9 311 aa15.69■□□□□ 0.1
TRA2B-213ENST00000485530 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
TRA2B-213ENST00000485530 ERVV-1B6SEH8 477 aa15.68■□□□□ 0.1
TRA2B-213ENST00000485530 BCAR3O75815 825 aa15.68■□□□□ 0.1
TRA2B-213ENST00000485530 TBC1D9BQ66K14 1250 aa15.68■□□□□ 0.1
TRA2B-213ENST00000485530 ZNF428Q96B54 188 aa15.68■□□□□ 0.1
TRA2B-213ENST00000485530 CHMP4AQ9BY43 222 aa15.68■□□□□ 0.1
TRA2B-213ENST00000485530 NFIXQ14938 502 aa15.67■□□□□ 0.1
TRA2B-213ENST00000485530 ALDH1L2Q3SY69 923 aa15.67■□□□□ 0.1
TRA2B-213ENST00000485530 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
TRA2B-213ENST00000485530 PLBD2Q8NHP8 589 aa15.67■□□□□ 0.1
TRA2B-213ENST00000485530 DDR1Q08345 913 aa15.66■□□□□ 0.1
TRA2B-213ENST00000485530 FLIIQ13045 1269 aa15.66■□□□□ 0.1
TRA2B-213ENST00000485530 CLEC4GQ6UXB4 293 aa15.66■□□□□ 0.1
TRA2B-213ENST00000485530 GIGYF2Q6Y7W6 1299 aaKnown RBP15.66■□□□□ 0.1
TRA2B-213ENST00000485530 NPM2Q86SE8 214 aaKnown RBP15.66■□□□□ 0.1
TRA2B-213ENST00000485530 PI4KAP2A4QPH2 592 aa15.65■□□□□ 0.1
TRA2B-213ENST00000485530 BRPF1P55201 1214 aaPredicted RBP15.65■□□□□ 0.1
TRA2B-213ENST00000485530 KIF6Q6ZMV9 814 aa15.65■□□□□ 0.1
TRA2B-213ENST00000485530 BICDL1Q6ZP65 573 aa15.65■□□□□ 0.1
TRA2B-213ENST00000485530 ZNF34Q8IZ26 560 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms