RNA–Protein interactions for RNA: ENST00000484814.1

YIF1A-207, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-207ENST00000484814 ZNF330Q9Y3S2 320 aaPredicted RBP28.31■■■□□ 2.12
YIF1A-207ENST00000484814 PRAMEF22A3QJZ6 481 aa28.3■■■□□ 2.12
YIF1A-207ENST00000484814 KLRG2A4D1S0 409 aaPredicted RBP28.3■■■□□ 2.12
YIF1A-207ENST00000484814 BTBD11A6QL63 1104 aa28.3■■■□□ 2.12
YIF1A-207ENST00000484814 DZIP3Q86Y13 1208 aaKnown RBP28.3■■■□□ 2.12
YIF1A-207ENST00000484814 CNKSR1Q969H4 720 aa28.3■■■□□ 2.12
YIF1A-207ENST00000484814 TAOK3Q9H2K8 898 aa28.3■■■□□ 2.12
YIF1A-207ENST00000484814 CLEC4GQ6UXB4 293 aa28.29■■■□□ 2.12
YIF1A-207ENST00000484814 ZNF219Q9P2Y4 722 aaPredicted RBP28.29■■■□□ 2.12
YIF1A-207ENST00000484814 RGL2O15211 777 aa28.27■■■□□ 2.12
YIF1A-207ENST00000484814 PIP4K2AP48426 406 aaPredicted RBP28.27■■■□□ 2.12
YIF1A-207ENST00000484814 MASTLQ96GX5 879 aa28.27■■■□□ 2.12
YIF1A-207ENST00000484814 NBPF26B4DH59 902 aa28.26■■■□□ 2.11
YIF1A-207ENST00000484814 POTEIP0CG38 1075 aa28.26■■■□□ 2.11
YIF1A-207ENST00000484814 POTEJP0CG39 1038 aa28.26■■■□□ 2.11
YIF1A-207ENST00000484814 NBPF10Q6P3W6 841 aaKnown RBP28.26■■■□□ 2.11
YIF1A-207ENST00000484814 NBPF15Q8N660 670 aa28.26■■■□□ 2.11
YIF1A-207ENST00000484814 SCN4AP35499 1836 aa28.25■■■□□ 2.11
YIF1A-207ENST00000484814 DDNO94850 711 aaPredicted RBP28.25■■■□□ 2.11
YIF1A-207ENST00000484814 HSPA1AP0DMV8 641 aaKnown RBP28.25■■■□□ 2.11
YIF1A-207ENST00000484814 HSPA1BP0DMV9 641 aaKnown RBP28.25■■■□□ 2.11
YIF1A-207ENST00000484814 ST5P78524 1137 aa28.25■■■□□ 2.11
YIF1A-207ENST00000484814 SNED1Q8TER0 1413 aa28.25■■■□□ 2.11
YIF1A-207ENST00000484814 PPP2R1AP30153 589 aa28.24■■■□□ 2.11
YIF1A-207ENST00000484814 SOGA3Q5TF21 947 aa28.24■■■□□ 2.11
YIF1A-207ENST00000484814 L3MBTL3Q96JM7 780 aaPredicted RBP28.24■■■□□ 2.11
YIF1A-207ENST00000484814 SNRPA1P09661 255 aaKnown RBP28.23■■■□□ 2.11
YIF1A-207ENST00000484814 CHADLQ6NUI6 762 aa28.23■■■□□ 2.11
YIF1A-207ENST00000484814 LAMB4A4D0S4 1761 aa28.22■■■□□ 2.11
YIF1A-207ENST00000484814 ADAMTSL1Q8N6G6 1762 aa28.22■■■□□ 2.11
YIF1A-207ENST00000484814 MCM10Q7L590 875 aa28.21■■■□□ 2.11
YIF1A-207ENST00000484814 CREBZFQ9NS37 354 aa28.21■■■□□ 2.11
YIF1A-207ENST00000484814 PASKQ96RG2 1323 aa28.2■■■□□ 2.11
YIF1A-207ENST00000484814 NBPF5PQ86XG9 351 aaPredicted RBP28.2■■■□□ 2.1
YIF1A-207ENST00000484814 TNS4Q8IZW8 715 aa28.2■■■□□ 2.1
YIF1A-207ENST00000484814 CFAP53Q96M91 514 aa28.2■■■□□ 2.1
YIF1A-207ENST00000484814 NPR1P16066 1061 aa28.19■■■□□ 2.1
YIF1A-207ENST00000484814 NPM2Q86SE8 214 aaKnown RBP28.19■■■□□ 2.1
YIF1A-207ENST00000484814 HTATSF1O43719 755 aaKnown RBP28.18■■■□□ 2.1
YIF1A-207ENST00000484814 CCDC93Q567U6 631 aa28.18■■■□□ 2.1
YIF1A-207ENST00000484814 KDM3BQ7LBC6 1761 aa28.17■■■□□ 2.1
YIF1A-207ENST00000484814 DCTN1Q14203 1278 aa28.17■■■□□ 2.1
YIF1A-207ENST00000484814 ZNF652Q9Y2D9 606 aa28.17■■■□□ 2.1
YIF1A-207ENST00000484814 FKBP4Q02790 459 aaKnown RBP eCLIP28.16■■■□□ 2.1
YIF1A-207ENST00000484814 TAF1DQ9H5J8 278 aaPredicted RBP28.16■■■□□ 2.1
YIF1A-207ENST00000484814 NUDCQ9Y266 331 aa28.16■■■□□ 2.1
YIF1A-207ENST00000484814 U2AF1L5P0DN76 240 aaPredicted RBP28.15■■■□□ 2.1
YIF1A-207ENST00000484814 U2AF1Q01081 240 aaKnown RBP eCLIP28.15■■■□□ 2.1
YIF1A-207ENST00000484814 OLFM4Q6UX06 510 aa28.15■■■□□ 2.1
YIF1A-207ENST00000484814 ZNF541Q9H0D2 1346 aa28.15■■■□□ 2.1
YIF1A-207ENST00000484814 DLG5Q8TDM6 1919 aa28.14■■■□□ 2.1
YIF1A-207ENST00000484814 NPHP1O15259 732 aa28.14■■■□□ 2.1
YIF1A-207ENST00000484814 NIP7Q9Y221 180 aaKnown RBP eCLIP28.14■■■□□ 2.1
YIF1A-207ENST00000484814 CNTNAP1P78357 1384 aa28.13■■■□□ 2.09
YIF1A-207ENST00000484814 IQCA1LA6NCM1 817 aa28.13■■■□□ 2.09
YIF1A-207ENST00000484814 ITGBL1O95965 494 aaPredicted RBP28.13■■■□□ 2.09
YIF1A-207ENST00000484814 HLFQ16534 295 aa28.13■■■□□ 2.09
YIF1A-207ENST00000484814 TPTE2Q6XPS3 522 aa28.13■■■□□ 2.09
YIF1A-207ENST00000484814 LDHDQ86WU2 507 aa28.13■■■□□ 2.09
YIF1A-207ENST00000484814 NUP98P52948 1817 aa28.13■■■□□ 2.09
YIF1A-207ENST00000484814 CRY2Q49AN0 593 aa28.12■■■□□ 2.09
YIF1A-207ENST00000484814 RTF1Q92541 710 aaKnown RBP28.12■■■□□ 2.09
YIF1A-207ENST00000484814 TAF7Q15545 349 aaPredicted RBP28.11■■■□□ 2.09
YIF1A-207ENST00000484814 ZNF277Q9NRM2 450 aaPredicted RBP28.11■■■□□ 2.09
YIF1A-207ENST00000484814 ABCC12Q96J65 1359 aa28.11■■■□□ 2.09
YIF1A-207ENST00000484814 RIC1Q4ADV7 1423 aa28.1■■■□□ 2.09
YIF1A-207ENST00000484814 COL4A5P29400 1685 aa28.1■■■□□ 2.09
YIF1A-207ENST00000484814 MKRN1Q9UHC7 482 aaKnown RBP28.1■■■□□ 2.09
YIF1A-207ENST00000484814 FZD9O00144 591 aa28.09■■■□□ 2.09
YIF1A-207ENST00000484814 RTKN2Q8IZC4 609 aa28.08■■■□□ 2.09
YIF1A-207ENST00000484814 CAPN15O75808 1086 aa28.06■■■□□ 2.08
YIF1A-207ENST00000484814 MIS18AQ9NYP9 233 aa28.06■■■□□ 2.08
YIF1A-207ENST00000484814 IBTKQ9P2D0 1353 aaPredicted RBP28.06■■■□□ 2.08
YIF1A-207ENST00000484814 ERVV-1B6SEH8 477 aa28.05■■■□□ 2.08
YIF1A-207ENST00000484814 PSMD1Q99460 953 aa28.05■■■□□ 2.08
YIF1A-207ENST00000484814 LTBP1Q14766 1721 aa28.04■■■□□ 2.08
YIF1A-207ENST00000484814 ALDH1B1P30837 517 aa28.04■■■□□ 2.08
YIF1A-207ENST00000484814 IARSP41252 1262 aaKnown RBP28.04■■■□□ 2.08
YIF1A-207ENST00000484814 HACL1Q9UJ83 578 aa28.04■■■□□ 2.08
YIF1A-207ENST00000484814 HOXA10P31260 410 aaPredicted RBP28.03■■■□□ 2.08
YIF1A-207ENST00000484814 SYNE4Q8N205 404 aa28.03■■■□□ 2.08
YIF1A-207ENST00000484814 PLEKHF1Q96S99 279 aa28.03■■■□□ 2.08
YIF1A-207ENST00000484814 MAP3K15Q6ZN16 1313 aa28.02■■■□□ 2.08
YIF1A-207ENST00000484814 UBN2Q6ZU65 1347 aa28.02■■■□□ 2.08
YIF1A-207ENST00000484814 FAM177BA6PVY3 158 aa28.02■■■□□ 2.08
YIF1A-207ENST00000484814 FOXN1O15353 648 aa28.02■■■□□ 2.08
YIF1A-207ENST00000484814 TMEM88BA6NKF7 163 aa28.01■■■□□ 2.07
YIF1A-207ENST00000484814 EPHX2P34913 555 aa28.01■■■□□ 2.07
YIF1A-207ENST00000484814 EIF4A1P60842 406 aaKnown RBP28.01■■■□□ 2.07
YIF1A-207ENST00000484814 RNF123Q5XPI4 1314 aa28■■■□□ 2.07
YIF1A-207ENST00000484814 TTLL7Q6ZT98 887 aa28■■■□□ 2.07
YIF1A-207ENST00000484814 NUTM1Q86Y26 1132 aa28■■■□□ 2.07
YIF1A-207ENST00000484814 GPC2Q8N158 579 aa28■■■□□ 2.07
YIF1A-207ENST00000484814 VEGFBP49765 207 aa27.99■■■□□ 2.07
YIF1A-207ENST00000484814 NYXQ9GZU5 481 aa27.99■■■□□ 2.07
YIF1A-207ENST00000484814 CC2D2BQ6DHV5 1058 aa27.98■■■□□ 2.07
YIF1A-207ENST00000484814 LRP10Q7Z4F1 713 aa27.98■■■□□ 2.07
YIF1A-207ENST00000484814 SLC51AQ86UW1 340 aa27.98■■■□□ 2.07
YIF1A-207ENST00000484814 PNISRQ8TF01 805 aaKnown RBP27.98■■■□□ 2.07
YIF1A-207ENST00000484814 PRDM10Q9NQV6 1147 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms