RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 B4GALNT3Q6L9W6 998 aa25.81■■□□□ 1.72
VCPKMT-203ENST00000484763 CNTNAP4Q9C0A0 1308 aa25.81■■□□□ 1.72
VCPKMT-203ENST00000484763 TTLL7Q6ZT98 887 aa25.81■■□□□ 1.72
VCPKMT-203ENST00000484763 KCNQ4P56696 695 aa25.8■■□□□ 1.72
VCPKMT-203ENST00000484763 KIF6Q6ZMV9 814 aa25.79■■□□□ 1.72
VCPKMT-203ENST00000484763 NPM2Q86SE8 214 aaKnown RBP25.79■■□□□ 1.72
VCPKMT-203ENST00000484763 NEXNQ0ZGT2 675 aa25.79■■□□□ 1.72
VCPKMT-203ENST00000484763 METTL22Q9BUU2 404 aaPredicted RBP25.79■■□□□ 1.72
VCPKMT-203ENST00000484763 C4BP0C0L5 1744 aa25.78■■□□□ 1.72
VCPKMT-203ENST00000484763 RGPD3A6NKT7 1758 aaPredicted RBP25.77■■□□□ 1.72
VCPKMT-203ENST00000484763 RGPD4Q7Z3J3 1758 aa25.77■■□□□ 1.72
VCPKMT-203ENST00000484763 ALDH1L1O75891 902 aa25.77■■□□□ 1.72
VCPKMT-203ENST00000484763 EIF5P55010 431 aaKnown RBP25.77■■□□□ 1.72
VCPKMT-203ENST00000484763 SLC27A3Q5K4L6 730 aa25.77■■□□□ 1.72
VCPKMT-203ENST00000484763 LINS1Q8NG48 757 aa25.77■■□□□ 1.72
VCPKMT-203ENST00000484763 AFDNP55196 1824 aaKnown RBP25.77■■□□□ 1.72
VCPKMT-203ENST00000484763 RC3H1Q5TC82 1133 aaKnown RBP25.77■■□□□ 1.72
VCPKMT-203ENST00000484763 MEIS3Q99687 375 aa25.77■■□□□ 1.72
VCPKMT-203ENST00000484763 ZBTB3Q9H5J0 574 aa25.76■■□□□ 1.71
VCPKMT-203ENST00000484763 MYD88Q99836 296 aa25.75■■□□□ 1.71
VCPKMT-203ENST00000484763 IBTKQ9P2D0 1353 aaPredicted RBP25.75■■□□□ 1.71
VCPKMT-203ENST00000484763 MAP3K15Q6ZN16 1313 aa25.75■■□□□ 1.71
VCPKMT-203ENST00000484763 PLSCR1O15162 318 aa25.74■■□□□ 1.71
VCPKMT-203ENST00000484763 APBA3O96018 575 aa25.74■■□□□ 1.71
VCPKMT-203ENST00000484763 COL15A1P39059 1388 aa25.74■■□□□ 1.71
VCPKMT-203ENST00000484763 GNAI3P08754 354 aa25.74■■□□□ 1.71
VCPKMT-203ENST00000484763 PCDHB15Q9Y5E8 787 aa25.74■■□□□ 1.71
VCPKMT-203ENST00000484763 CWF19L2Q2TBE0 894 aaKnown RBP25.73■■□□□ 1.71
VCPKMT-203ENST00000484763 DZIP3Q86Y13 1208 aaKnown RBP25.73■■□□□ 1.71
VCPKMT-203ENST00000484763 ARXQ96QS3 562 aa25.73■■□□□ 1.71
VCPKMT-203ENST00000484763 LRRC4BQ9NT99 713 aa25.73■■□□□ 1.71
VCPKMT-203ENST00000484763 ANKRD36CQ5JPF3 1778 aa25.72■■□□□ 1.71
VCPKMT-203ENST00000484763 IGKV5-2P06315 115 aa25.72■■□□□ 1.71
VCPKMT-203ENST00000484763 HMGB2P26583 209 aaKnown RBP25.72■■□□□ 1.71
VCPKMT-203ENST00000484763 USP44Q9H0E7 712 aa25.72■■□□□ 1.71
VCPKMT-203ENST00000484763 C1orf115Q9H7X2 142 aa25.72■■□□□ 1.71
VCPKMT-203ENST00000484763 NEURL1BA8MQ27 555 aa25.71■■□□□ 1.71
VCPKMT-203ENST00000484763 TXNRD1Q16881 649 aa25.71■■□□□ 1.71
VCPKMT-203ENST00000484763 BCORQ6W2J9 1755 aa25.71■■□□□ 1.71
VCPKMT-203ENST00000484763 NUP98P52948 1817 aa25.71■■□□□ 1.71
VCPKMT-203ENST00000484763 A0A087WZG4 1122 aa25.7■■□□□ 1.7
VCPKMT-203ENST00000484763 ERVV-1B6SEH8 477 aa25.7■■□□□ 1.7
VCPKMT-203ENST00000484763 RPS6KA4O75676 772 aa25.7■■□□□ 1.7
VCPKMT-203ENST00000484763 TBC1D2BQ9UPU7 963 aa25.7■■□□□ 1.7
VCPKMT-203ENST00000484763 GNPATO15228 680 aa25.69■■□□□ 1.7
VCPKMT-203ENST00000484763 UBTFL1P0CB47 393 aaPredicted RBP25.69■■□□□ 1.7
VCPKMT-203ENST00000484763 GIGYF2Q6Y7W6 1299 aaKnown RBP25.69■■□□□ 1.7
VCPKMT-203ENST00000484763 GNAI2P04899 355 aa25.68■■□□□ 1.7
VCPKMT-203ENST00000484763 AK7Q96M32 723 aa25.68■■□□□ 1.7
VCPKMT-203ENST00000484763 C9orf78Q9NZ63 289 aaPredicted RBP25.68■■□□□ 1.7
VCPKMT-203ENST00000484763 SCN7AQ01118 1682 aa25.68■■□□□ 1.7
VCPKMT-203ENST00000484763 GCKRQ14397 625 aa25.67■■□□□ 1.7
VCPKMT-203ENST00000484763 HSP90AB3PQ58FF7 597 aa25.67■■□□□ 1.7
VCPKMT-203ENST00000484763 UBR3Q6ZT12 1888 aa25.67■■□□□ 1.7
VCPKMT-203ENST00000484763 ATP5J2-PTCD1G3V325 749 aa25.67■■□□□ 1.7
VCPKMT-203ENST00000484763 TCIRG1Q13488 830 aa25.67■■□□□ 1.7
VCPKMT-203ENST00000484763 PROM2Q8N271 834 aa25.67■■□□□ 1.7
VCPKMT-203ENST00000484763 RTCBQ9Y3I0 505 aaKnown RBP25.67■■□□□ 1.7
VCPKMT-203ENST00000484763 GRM8O00222 908 aa25.66■■□□□ 1.7
VCPKMT-203ENST00000484763 NBPF7P0C2Y1 421 aaPredicted RBP25.66■■□□□ 1.7
VCPKMT-203ENST00000484763 KDM2BQ8NHM5 1336 aa25.66■■□□□ 1.7
VCPKMT-203ENST00000484763 UTYO14607 1347 aa25.65■■□□□ 1.7
VCPKMT-203ENST00000484763 RWDD1Q9H446 243 aaPredicted RBP25.65■■□□□ 1.7
VCPKMT-203ENST00000484763 C4AP0C0L4 1744 aa25.65■■□□□ 1.7
VCPKMT-203ENST00000484763 CAMTA2O94983 1202 aa25.65■■□□□ 1.7
VCPKMT-203ENST00000484763 HDAC1Q13547 482 aaPredicted RBP25.65■■□□□ 1.7
VCPKMT-203ENST00000484763 HLFQ16534 295 aa25.65■■□□□ 1.7
VCPKMT-203ENST00000484763 CENPQQ7L2Z9 268 aaPredicted RBP25.65■■□□□ 1.7
VCPKMT-203ENST00000484763 CCDC191Q8NCU4 936 aa25.65■■□□□ 1.7
VCPKMT-203ENST00000484763 ISCA1Q9BUE6 129 aa25.65■■□□□ 1.7
VCPKMT-203ENST00000484763 CWC25Q9NXE8 425 aaPredicted RBP25.64■■□□□ 1.7
VCPKMT-203ENST00000484763 HDAC5Q9UQL6 1122 aa25.64■■□□□ 1.7
VCPKMT-203ENST00000484763 IGHDP01880 384 aa25.63■■□□□ 1.69
VCPKMT-203ENST00000484763 RPAP2Q8IXW5 612 aaPredicted RBP25.63■■□□□ 1.69
VCPKMT-203ENST00000484763 LRRFIP2Q9Y608 721 aaKnown RBP25.63■■□□□ 1.69
VCPKMT-203ENST00000484763 TRIM28Q13263 835 aaKnown RBP25.63■■□□□ 1.69
VCPKMT-203ENST00000484763 CEP85Q6P2H3 762 aa25.63■■□□□ 1.69
VCPKMT-203ENST00000484763 RGL2O15211 777 aa25.61■■□□□ 1.69
VCPKMT-203ENST00000484763 ANKRD44Q8N8A2 993 aa25.61■■□□□ 1.69
VCPKMT-203ENST00000484763 ZNF652Q9Y2D9 606 aa25.61■■□□□ 1.69
VCPKMT-203ENST00000484763 ADRA2BP18089 450 aa25.6■■□□□ 1.69
VCPKMT-203ENST00000484763 SF3B2Q13435 895 aaKnown RBP25.6■■□□□ 1.69
VCPKMT-203ENST00000484763 AMIGO3Q86WK7 504 aa25.59■■□□□ 1.69
VCPKMT-203ENST00000484763 SIRT2Q8IXJ6 389 aa25.59■■□□□ 1.69
VCPKMT-203ENST00000484763 NARFQ9UHQ1 456 aa25.59■■□□□ 1.69
VCPKMT-203ENST00000484763 TRAPPC3LQ5T215 181 aa25.58■■□□□ 1.69
VCPKMT-203ENST00000484763 CLEC4GQ6UXB4 293 aa25.58■■□□□ 1.69
VCPKMT-203ENST00000484763 PHF14O94880 888 aa25.58■■□□□ 1.68
VCPKMT-203ENST00000484763 SMIM5Q71RC9 77 aa25.58■■□□□ 1.68
VCPKMT-203ENST00000484763 ZNF34Q8IZ26 560 aa25.58■■□□□ 1.68
VCPKMT-203ENST00000484763 GPTP24298 496 aa25.57■■□□□ 1.68
VCPKMT-203ENST00000484763 SSFA2P28290 1259 aa25.57■■□□□ 1.68
VCPKMT-203ENST00000484763 UBE3BQ7Z3V4 1068 aa25.57■■□□□ 1.68
VCPKMT-203ENST00000484763 ARHGEF1Q92888 912 aaKnown RBP25.57■■□□□ 1.68
VCPKMT-203ENST00000484763 H7C1W4 665 aa25.56■■□□□ 1.68
VCPKMT-203ENST00000484763 ZPR1O75312 459 aa25.56■■□□□ 1.68
VCPKMT-203ENST00000484763 HMMRO75330 724 aa25.56■■□□□ 1.68
VCPKMT-203ENST00000484763 BAG6P46379 1132 aa25.56■■□□□ 1.68
VCPKMT-203ENST00000484763 NLRP10Q86W26 655 aa25.56■■□□□ 1.68
VCPKMT-203ENST00000484763 CAMKK2Q96RR4 588 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms