RNA–Protein interactions for RNA: ENST00000484588.1

PPM1F-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 348 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-206ENST00000484588 EPHX2P34913 555 aa12.78□□□□□ -0.36
PPM1F-206ENST00000484588 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
PPM1F-206ENST00000484588 NUDCQ9Y266 331 aa12.78□□□□□ -0.36
PPM1F-206ENST00000484588 COL15A1P39059 1388 aa12.78□□□□□ -0.36
PPM1F-206ENST00000484588 PDE6BP35913 854 aa12.77□□□□□ -0.37
PPM1F-206ENST00000484588 RALBP1Q15311 655 aa12.77□□□□□ -0.37
PPM1F-206ENST00000484588 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.37
PPM1F-206ENST00000484588 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
PPM1F-206ENST00000484588 DDX21Q9NR30 783 aaKnown RBP eCLIP12.77□□□□□ -0.37
PPM1F-206ENST00000484588 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.37
PPM1F-206ENST00000484588 COL11A2P13942 1736 aaPredicted RBP12.76□□□□□ -0.37
PPM1F-206ENST00000484588 ANKRD31Q8N7Z5 1873 aa12.76□□□□□ -0.37
PPM1F-206ENST00000484588 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.37
PPM1F-206ENST00000484588 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
PPM1F-206ENST00000484588 DGKZQ13574 1117 aa12.75□□□□□ -0.37
PPM1F-206ENST00000484588 AKAP4Q5JQC9 854 aa12.75□□□□□ -0.37
PPM1F-206ENST00000484588 MAP1SQ66K74 1059 aaPredicted RBP12.75□□□□□ -0.37
PPM1F-206ENST00000484588 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
PPM1F-206ENST00000484588 ARFGEF2Q9Y6D5 1785 aa12.75□□□□□ -0.37
PPM1F-206ENST00000484588 U2AF1L5P0DN76 240 aaPredicted RBP12.74□□□□□ -0.37
PPM1F-206ENST00000484588 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
PPM1F-206ENST00000484588 U2AF1Q01081 240 aaKnown RBP eCLIP12.74□□□□□ -0.37
PPM1F-206ENST00000484588 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
PPM1F-206ENST00000484588 ZNF541Q9H0D2 1346 aa12.73□□□□□ -0.37
PPM1F-206ENST00000484588 CASP8AP2Q9UKL3 1982 aa12.73□□□□□ -0.37
PPM1F-206ENST00000484588 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
PPM1F-206ENST00000484588 CYP4F22Q6NT55 531 aa12.73□□□□□ -0.37
PPM1F-206ENST00000484588 PRPF40BQ6NWY9 871 aaKnown RBP12.73□□□□□ -0.37
PPM1F-206ENST00000484588 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
PPM1F-206ENST00000484588 TLL2Q9Y6L7 1015 aa12.73□□□□□ -0.37
PPM1F-206ENST00000484588 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
PPM1F-206ENST00000484588 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
PPM1F-206ENST00000484588 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
PPM1F-206ENST00000484588 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
PPM1F-206ENST00000484588 GCC1Q96CN9 775 aa12.72□□□□□ -0.37
PPM1F-206ENST00000484588 HHIPL1Q96JK4 782 aa12.72□□□□□ -0.37
PPM1F-206ENST00000484588 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
PPM1F-206ENST00000484588 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
PPM1F-206ENST00000484588 RNF123Q5XPI4 1314 aa12.71□□□□□ -0.37
PPM1F-206ENST00000484588 PRKAR2BP31323 418 aa12.71□□□□□ -0.37
PPM1F-206ENST00000484588 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
PPM1F-206ENST00000484588 GPC2Q8N158 579 aa12.71□□□□□ -0.37
PPM1F-206ENST00000484588 GAS2L2Q8NHY3 880 aa12.71□□□□□ -0.37
PPM1F-206ENST00000484588 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
PPM1F-206ENST00000484588 TRPM7Q96QT4 1865 aa12.7□□□□□ -0.38
PPM1F-206ENST00000484588 ZNF316A6NFI3 1004 aaPredicted RBP12.7□□□□□ -0.38
PPM1F-206ENST00000484588 FZD9O00144 591 aa12.7□□□□□ -0.38
PPM1F-206ENST00000484588 SRGNP10124 158 aa12.7□□□□□ -0.38
PPM1F-206ENST00000484588 FKBP4Q02790 459 aaKnown RBP eCLIP12.7□□□□□ -0.38
PPM1F-206ENST00000484588 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
PPM1F-206ENST00000484588 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
PPM1F-206ENST00000484588 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
PPM1F-206ENST00000484588 LGR6Q9HBX8 967 aa12.7□□□□□ -0.38
PPM1F-206ENST00000484588 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
PPM1F-206ENST00000484588 MYBBP1AQ9BQG0 1328 aaKnown RBP12.69□□□□□ -0.38
PPM1F-206ENST00000484588 GNAT3A8MTJ3 354 aa12.69□□□□□ -0.38
PPM1F-206ENST00000484588 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
PPM1F-206ENST00000484588 CST9Q5W186 159 aa12.69□□□□□ -0.38
PPM1F-206ENST00000484588 MASTLQ96GX5 879 aa12.69□□□□□ -0.38
PPM1F-206ENST00000484588 SCN7AQ01118 1682 aa12.69□□□□□ -0.38
PPM1F-206ENST00000484588 AOC2O75106 756 aa12.68□□□□□ -0.38
PPM1F-206ENST00000484588 NEFMP07197 916 aa12.68□□□□□ -0.38
PPM1F-206ENST00000484588 SOX10P56693 466 aa12.68□□□□□ -0.38
PPM1F-206ENST00000484588 GRM1Q13255 1194 aa12.68□□□□□ -0.38
PPM1F-206ENST00000484588 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
PPM1F-206ENST00000484588 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
PPM1F-206ENST00000484588 PNNQ9H307 717 aaKnown RBP12.68□□□□□ -0.38
PPM1F-206ENST00000484588 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
PPM1F-206ENST00000484588 MRC1P22897 1456 aa12.67□□□□□ -0.38
PPM1F-206ENST00000484588 SCN11AQ9UI33 1791 aa12.67□□□□□ -0.38
PPM1F-206ENST00000484588 A0A087WZG4 1122 aa12.67□□□□□ -0.38
PPM1F-206ENST00000484588 EIF5P55010 431 aaKnown RBP12.67□□□□□ -0.38
PPM1F-206ENST00000484588 TBC1D9BQ66K14 1250 aa12.67□□□□□ -0.38
PPM1F-206ENST00000484588 PRKRIP1Q9H875 184 aaPredicted RBP12.67□□□□□ -0.38
PPM1F-206ENST00000484588 BICDL1Q6ZP65 573 aa12.66□□□□□ -0.38
PPM1F-206ENST00000484588 RTKN2Q8IZC4 609 aa12.66□□□□□ -0.38
PPM1F-206ENST00000484588 CNBD1Q8NA66 436 aa12.66□□□□□ -0.38
PPM1F-206ENST00000484588 ZNF277Q9NRM2 450 aaPredicted RBP12.66□□□□□ -0.38
PPM1F-206ENST00000484588 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
PPM1F-206ENST00000484588 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
PPM1F-206ENST00000484588 LMOD1P29536 600 aaPredicted RBP12.65□□□□□ -0.38
PPM1F-206ENST00000484588 ST5P78524 1137 aa12.65□□□□□ -0.38
PPM1F-206ENST00000484588 USP50Q70EL3 339 aaPredicted RBP12.65□□□□□ -0.38
PPM1F-206ENST00000484588 IL17REQ8NFR9 667 aa12.65□□□□□ -0.38
PPM1F-206ENST00000484588 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
PPM1F-206ENST00000484588 FMR1Q06787 632 aaKnown RBP eCLIP12.64□□□□□ -0.397e-8■■□□□ 12.6
PPM1F-206ENST00000484588 TEFQ10587 303 aa12.64□□□□□ -0.39
PPM1F-206ENST00000484588 NOGQ13253 232 aa12.64□□□□□ -0.39
PPM1F-206ENST00000484588 NBPF15Q8N660 670 aa12.64□□□□□ -0.39
PPM1F-206ENST00000484588 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
PPM1F-206ENST00000484588 SAGE1Q9NXZ1 904 aa12.64□□□□□ -0.39
PPM1F-206ENST00000484588 TRAF5O00463 557 aa12.63□□□□□ -0.39
PPM1F-206ENST00000484588 NPR1P16066 1061 aa12.63□□□□□ -0.39
PPM1F-206ENST00000484588 SCNN1DP51172 638 aa12.63□□□□□ -0.39
PPM1F-206ENST00000484588 CIAPIN1Q6FI81 312 aa12.63□□□□□ -0.39
PPM1F-206ENST00000484588 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
PPM1F-206ENST00000484588 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
PPM1F-206ENST00000484588 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
PPM1F-206ENST00000484588 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
PPM1F-206ENST00000484588 SLC39A6Q13433 755 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms