RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 UBR2Q8IWV8 1755 aa24.74■■□□□ 1.55
DDR1-245ENST00000484556 LTBP1Q14766 1721 aa24.72■■□□□ 1.55
DDR1-245ENST00000484556 SOGA3Q5TF21 947 aa24.72■■□□□ 1.55
DDR1-245ENST00000484556 BEGAINQ9BUH8 593 aa24.72■■□□□ 1.55
DDR1-245ENST00000484556 EIF5P55010 431 aaKnown RBP24.71■■□□□ 1.55
DDR1-245ENST00000484556 AKAP4Q5JQC9 854 aa24.71■■□□□ 1.55
DDR1-245ENST00000484556 STYK1Q6J9G0 422 aa24.71■■□□□ 1.55
DDR1-245ENST00000484556 CAPNS2Q96L46 248 aa24.71■■□□□ 1.55
DDR1-245ENST00000484556 ZNF330Q9Y3S2 320 aaPredicted RBP24.71■■□□□ 1.55
DDR1-245ENST00000484556 NPHP1O15259 732 aa24.7■■□□□ 1.54
DDR1-245ENST00000484556 SRGNP10124 158 aa24.7■■□□□ 1.54
DDR1-245ENST00000484556 FMR1Q06787 632 aaKnown RBP eCLIP24.7■■□□□ 1.54
DDR1-245ENST00000484556 CYP4F22Q6NT55 531 aa24.7■■□□□ 1.54
DDR1-245ENST00000484556 CNBD1Q8NA66 436 aa24.7■■□□□ 1.54
DDR1-245ENST00000484556 ZNF277Q9NRM2 450 aaPredicted RBP24.7■■□□□ 1.54
DDR1-245ENST00000484556 TBC1D2BQ9UPU7 963 aa24.7■■□□□ 1.54
DDR1-245ENST00000484556 MASTLQ96GX5 879 aa24.69■■□□□ 1.54
DDR1-245ENST00000484556 MCOLN1Q9GZU1 580 aa24.69■■□□□ 1.54
DDR1-245ENST00000484556 DDX21Q9NR30 783 aaKnown RBP eCLIP24.69■■□□□ 1.54
DDR1-245ENST00000484556 A0A087WZG4 1122 aa24.68■■□□□ 1.54
DDR1-245ENST00000484556 RNMTO43148 476 aaKnown RBP24.68■■□□□ 1.54
DDR1-245ENST00000484556 CCDC93Q567U6 631 aa24.68■■□□□ 1.54
DDR1-245ENST00000484556 PNMA8AQ86V59 439 aaPredicted RBP24.68■■□□□ 1.54
DDR1-245ENST00000484556 OLFM4Q6UX06 510 aa24.67■■□□□ 1.54
DDR1-245ENST00000484556 VSIG10Q8N0Z9 540 aa24.67■■□□□ 1.54
DDR1-245ENST00000484556 GPR101Q96P66 508 aaPredicted RBP24.67■■□□□ 1.54
DDR1-245ENST00000484556 CASP8AP2Q9UKL3 1982 aa24.66■■□□□ 1.54
DDR1-245ENST00000484556 ST5P78524 1137 aa24.66■■□□□ 1.54
DDR1-245ENST00000484556 C7orf43Q8WVR3 580 aa24.66■■□□□ 1.54
DDR1-245ENST00000484556 POLR3GLQ9BT43 218 aa24.66■■□□□ 1.54
DDR1-245ENST00000484556 FKBP4Q02790 459 aaKnown RBP eCLIP24.65■■□□□ 1.54
DDR1-245ENST00000484556 BCORQ6W2J9 1755 aa24.65■■□□□ 1.54
DDR1-245ENST00000484556 TRPM7Q96QT4 1865 aa24.64■■□□□ 1.54
DDR1-245ENST00000484556 AOC2O75106 756 aa24.64■■□□□ 1.54
DDR1-245ENST00000484556 STARD3NLO95772 234 aa24.64■■□□□ 1.54
DDR1-245ENST00000484556 ECE1P42892 770 aa24.64■■□□□ 1.54
DDR1-245ENST00000484556 SETDB2Q96T68 719 aa24.64■■□□□ 1.54
DDR1-245ENST00000484556 PDE4DIPQ5VU43 2346 aa24.63■■□□□ 1.53
DDR1-245ENST00000484556 FZD9O00144 591 aa24.6■■□□□ 1.53
DDR1-245ENST00000484556 TRAF5O00463 557 aa24.59■■□□□ 1.53
DDR1-245ENST00000484556 CAMTA2O94983 1202 aa24.59■■□□□ 1.53
DDR1-245ENST00000484556 IL13P35225 146 aa24.59■■□□□ 1.53
DDR1-245ENST00000484556 IARSP41252 1262 aaKnown RBP24.59■■□□□ 1.53
DDR1-245ENST00000484556 TTC5Q8N0Z6 440 aa24.59■■□□□ 1.53
DDR1-245ENST00000484556 GPC2Q8N158 579 aa24.59■■□□□ 1.53
DDR1-245ENST00000484556 DGKZQ13574 1117 aa24.58■■□□□ 1.53
DDR1-245ENST00000484556 GJA3Q9Y6H8 435 aa24.58■■□□□ 1.53
DDR1-245ENST00000484556 CST9Q5W186 159 aa24.57■■□□□ 1.52
DDR1-245ENST00000484556 ZNF496Q96IT1 587 aaPredicted RBP24.57■■□□□ 1.52
DDR1-245ENST00000484556 TLL2Q9Y6L7 1015 aa24.57■■□□□ 1.52
DDR1-245ENST00000484556 COL4A5P29400 1685 aa24.56■■□□□ 1.52
DDR1-245ENST00000484556 NPR1P16066 1061 aa24.56■■□□□ 1.52
DDR1-245ENST00000484556 IL6STP40189 918 aaPredicted RBP24.56■■□□□ 1.52
DDR1-245ENST00000484556 HEG1Q9ULI3 1381 aa24.55■■□□□ 1.52
DDR1-245ENST00000484556 HMOX1P09601 288 aa24.55■■□□□ 1.52
DDR1-245ENST00000484556 SYNE4Q8N205 404 aa24.55■■□□□ 1.52
DDR1-245ENST00000484556 LMOD1P29536 600 aaPredicted RBP24.54■■□□□ 1.52
DDR1-245ENST00000484556 MTHFSDQ2M296 383 aaKnown RBP24.54■■□□□ 1.52
DDR1-245ENST00000484556 NBPF5PQ86XG9 351 aaPredicted RBP24.54■■□□□ 1.52
DDR1-245ENST00000484556 RTKN2Q8IZC4 609 aa24.54■■□□□ 1.52
DDR1-245ENST00000484556 A1BGP04217 495 aa24.53■■□□□ 1.52
DDR1-245ENST00000484556 MAP2K2P36507 400 aa24.53■■□□□ 1.52
DDR1-245ENST00000484556 EPS15P42566 896 aa24.53■■□□□ 1.52
DDR1-245ENST00000484556 MORC1Q86VD1 984 aa24.53■■□□□ 1.52
DDR1-245ENST00000484556 NPM2Q86SE8 214 aaKnown RBP24.52■■□□□ 1.52
DDR1-245ENST00000484556 DZIP3Q86Y13 1208 aaKnown RBP24.52■■□□□ 1.52
DDR1-245ENST00000484556 SCNN1DP51172 638 aa24.51■■□□□ 1.51
DDR1-245ENST00000484556 SOX10P56693 466 aa24.51■■□□□ 1.51
DDR1-245ENST00000484556 JDP2Q8WYK2 163 aa24.51■■□□□ 1.51
DDR1-245ENST00000484556 SIPA1L3O60292 1781 aaPredicted RBP24.5■■□□□ 1.51
DDR1-245ENST00000484556 CA12O43570 354 aa24.5■■□□□ 1.51
DDR1-245ENST00000484556 PIP4K2AP48426 406 aaPredicted RBP24.5■■□□□ 1.51
DDR1-245ENST00000484556 EIF6P56537 245 aaKnown RBP24.5■■□□□ 1.51
DDR1-245ENST00000484556 SNED1Q8TER0 1413 aa24.5■■□□□ 1.51
DDR1-245ENST00000484556 PANK3Q9H999 370 aa24.49■■□□□ 1.51
DDR1-245ENST00000484556 ZNF790Q6PG37 636 aa24.48■■□□□ 1.51
DDR1-245ENST00000484556 TEX13AQ9BXU3 409 aaPredicted RBP24.48■■□□□ 1.51
DDR1-245ENST00000484556 KLRG2A4D1S0 409 aaPredicted RBP24.47■■□□□ 1.51
DDR1-245ENST00000484556 FAM177BA6PVY3 158 aa24.47■■□□□ 1.51
DDR1-245ENST00000484556 CIAPIN1Q6FI81 312 aa24.47■■□□□ 1.51
DDR1-245ENST00000484556 SAPCD2Q86UD0 394 aa24.47■■□□□ 1.51
DDR1-245ENST00000484556 BRPF1P55201 1214 aaPredicted RBP24.46■■□□□ 1.51
DDR1-245ENST00000484556 USP50Q70EL3 339 aaPredicted RBP24.46■■□□□ 1.51
DDR1-245ENST00000484556 CELF2O95319 508 aaKnown RBP24.45■■□□□ 1.5
DDR1-245ENST00000484556 PSMD1Q99460 953 aa24.45■■□□□ 1.5
DDR1-245ENST00000484556 TEFQ10587 303 aa24.43■■□□□ 1.5
DDR1-245ENST00000484556 ALDH1B1P30837 517 aa24.42■■□□□ 1.5
DDR1-245ENST00000484556 PRPF38BQ5VTL8 546 aaKnown RBP24.42■■□□□ 1.5
DDR1-245ENST00000484556 SLC51AQ86UW1 340 aa24.42■■□□□ 1.5
DDR1-245ENST00000484556 FMNL2Q96PY5 1086 aa24.42■■□□□ 1.5
DDR1-245ENST00000484556 ZIC5Q96T25 663 aa24.42■■□□□ 1.5
DDR1-245ENST00000484556 TPTE2Q6XPS3 522 aa24.41■■□□□ 1.5
DDR1-245ENST00000484556 LARGE2Q8N3Y3 721 aa24.41■■□□□ 1.5
DDR1-245ENST00000484556 GLIS2Q9BZE0 524 aaPredicted RBP24.41■■□□□ 1.5
DDR1-245ENST00000484556 ZNF408Q9H9D4 720 aa24.41■■□□□ 1.5
DDR1-245ENST00000484556 NIP7Q9Y221 180 aaKnown RBP eCLIP24.41■■□□□ 1.5
DDR1-245ENST00000484556 ZNF652Q9Y2D9 606 aa24.41■■□□□ 1.5
DDR1-245ENST00000484556 KCNQ3O43525 872 aa24.4■■□□□ 1.5
DDR1-245ENST00000484556 IL17REQ8NFR9 667 aa24.4■■□□□ 1.5
DDR1-245ENST00000484556 CLEC4GQ6UXB4 293 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms