RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 EFSO43281 561 aa10.03□□□□□ -0.8
CCDC66-219ENST00000484441 LGR5O75473 907 aa10.03□□□□□ -0.8
CCDC66-219ENST00000484441 TMEM164Q5U3C3 297 aa10.03□□□□□ -0.8
CCDC66-219ENST00000484441 ZNF385CQ66K41 422 aaPredicted RBP10.03□□□□□ -0.8
CCDC66-219ENST00000484441 BICDL1Q6ZP65 573 aa10.03□□□□□ -0.8
CCDC66-219ENST00000484441 ALDH16A1Q8IZ83 802 aa10.03□□□□□ -0.8
CCDC66-219ENST00000484441 RHPN1Q8TCX5 695 aa10.03□□□□□ -0.8
CCDC66-219ENST00000484441 HCN4Q9Y3Q4 1203 aa10.03□□□□□ -0.8
CCDC66-219ENST00000484441 PPP1R15AO75807 674 aaPredicted RBP10.02□□□□□ -0.81
CCDC66-219ENST00000484441 FGFR3P22607 806 aa10.02□□□□□ -0.81
CCDC66-219ENST00000484441 TNP2Q05952 138 aa10.02□□□□□ -0.81
CCDC66-219ENST00000484441 OCLNQ16625 522 aa10.02□□□□□ -0.81
CCDC66-219ENST00000484441 MAPTP10636 758 aaKnown RBP10.01□□□□□ -0.81
CCDC66-219ENST00000484441 FAM182BQ5T319 152 aa10.01□□□□□ -0.81
CCDC66-219ENST00000484441 WHAMMQ8TF30 809 aa10.01□□□□□ -0.81
CCDC66-219ENST00000484441 NSFL1CQ9UNZ2 370 aaKnown RBP10.01□□□□□ -0.81
CCDC66-219ENST00000484441 MAP2K3P46734 347 aa10□□□□□ -0.81
CCDC66-219ENST00000484441 CHMP7Q8WUX9 453 aaPredicted RBP10□□□□□ -0.81
CCDC66-219ENST00000484441 CLP1Q92989 425 aaKnown RBP10□□□□□ -0.81
CCDC66-219ENST00000484441 C2CD2LO14523 706 aa9.99□□□□□ -0.81
CCDC66-219ENST00000484441 LAMC2Q13753 1193 aa9.99□□□□□ -0.81
CCDC66-219ENST00000484441 RTN1Q16799 776 aa9.99□□□□□ -0.81
CCDC66-219ENST00000484441 LRRC69Q6ZNQ3 347 aa9.99□□□□□ -0.81
CCDC66-219ENST00000484441 GJA3Q9Y6H8 435 aa9.99□□□□□ -0.81
CCDC66-219ENST00000484441 DCDC2BA2VCK2 349 aa9.98□□□□□ -0.81
CCDC66-219ENST00000484441 FAM181BA6NEQ2 426 aa9.98□□□□□ -0.81
CCDC66-219ENST00000484441 ARHGEF15O94989 841 aa9.98□□□□□ -0.81
CCDC66-219ENST00000484441 CTBSQ01459 385 aa9.98□□□□□ -0.81
CCDC66-219ENST00000484441 FKBP5Q13451 457 aaPredicted RBP9.98□□□□□ -0.81
CCDC66-219ENST00000484441 LYPD4Q6UWN0 246 aa9.98□□□□□ -0.81
CCDC66-219ENST00000484441 ACDQ96AP0 544 aa9.98□□□□□ -0.81
CCDC66-219ENST00000484441 MYO19Q96H55 970 aa9.98□□□□□ -0.81
CCDC66-219ENST00000484441 LRRC4BQ9NT99 713 aa9.98□□□□□ -0.81
CCDC66-219ENST00000484441 CELA2BP08218 269 aaPredicted RBP9.97□□□□□ -0.81
CCDC66-219ENST00000484441 HIF1AQ16665 826 aa9.97□□□□□ -0.81
CCDC66-219ENST00000484441 IER5Q5VY09 327 aa9.97□□□□□ -0.81
CCDC66-219ENST00000484441 HSH2DQ96JZ2 352 aa9.97□□□□□ -0.81
CCDC66-219ENST00000484441 SUSD3Q96L08 255 aa9.97□□□□□ -0.81
CCDC66-219ENST00000484441 QTRT2Q9H974 415 aaKnown RBP9.97□□□□□ -0.81
CCDC66-219ENST00000484441 SLAIN2Q9P270 581 aa9.97□□□□□ -0.81
CCDC66-219ENST00000484441 ANKIB1Q9P2G1 1089 aa9.97□□□□□ -0.81
CCDC66-219ENST00000484441 KHNYNO15037 678 aaKnown RBP9.96□□□□□ -0.82
CCDC66-219ENST00000484441 SVOPQ8N4V2 548 aa9.96□□□□□ -0.82
CCDC66-219ENST00000484441 ZNF280CQ8ND82 737 aa9.96□□□□□ -0.82
CCDC66-219ENST00000484441 CXXC1Q9P0U4 656 aaPredicted RBP9.96□□□□□ -0.82
CCDC66-219ENST00000484441 PRMT3O60678 531 aa9.95□□□□□ -0.82
CCDC66-219ENST00000484441 TYRO3Q06418 890 aa9.95□□□□□ -0.82
CCDC66-219ENST00000484441 COL26A1Q96A83 441 aa9.95□□□□□ -0.82
CCDC66-219ENST00000484441 NGLY1Q96IV0 654 aa9.95□□□□□ -0.82
CCDC66-219ENST00000484441 PRIMPOLQ96LW4 560 aa9.95□□□□□ -0.82
CCDC66-219ENST00000484441 STRN4Q9NRL3 753 aa9.95□□□□□ -0.82
CCDC66-219ENST00000484441 TMEM88BA6NKF7 163 aa9.94□□□□□ -0.82
CCDC66-219ENST00000484441 BMP4P12644 408 aa9.94□□□□□ -0.82
CCDC66-219ENST00000484441 CD33P20138 364 aa9.94□□□□□ -0.82
CCDC66-219ENST00000484441 KCNQ4P56696 695 aa9.94□□□□□ -0.82
CCDC66-219ENST00000484441 OXCT2Q9BYC2 517 aaPredicted RBP9.94□□□□□ -0.82
CCDC66-219ENST00000484441 NEUROD4Q9HD90 331 aa9.94□□□□□ -0.82
CCDC66-219ENST00000484441 AVENQ9NQS1 362 aaPredicted RBP9.94□□□□□ -0.82
CCDC66-219ENST00000484441 BCS1LQ9Y276 419 aa9.94□□□□□ -0.82
CCDC66-219ENST00000484441 TGFBR3LH3BV60 316 aa9.93□□□□□ -0.82
CCDC66-219ENST00000484441 ARAFP10398 606 aa9.93□□□□□ -0.82
CCDC66-219ENST00000484441 BCRP11274 1271 aa9.93□□□□□ -0.82
CCDC66-219ENST00000484441 MARK1Q9P0L2 795 aa9.93□□□□□ -0.82
CCDC66-219ENST00000484441 DMGDHQ9UI17 866 aaKnown RBP9.93□□□□□ -0.82
CCDC66-219ENST00000484441 GDF2Q9UK05 429 aaPredicted RBP9.93□□□□□ -0.82
CCDC66-219ENST00000484441 SUPT5HO00267 1087 aaKnown RBP9.92□□□□□ -0.82
CCDC66-219ENST00000484441 SLCO4C1Q6ZQN7 724 aa9.92□□□□□ -0.82
CCDC66-219ENST00000484441 BTLAQ7Z6A9 289 aa9.92□□□□□ -0.82
CCDC66-219ENST00000484441 OIP5O43482 229 aa9.91□□□□□ -0.82
CCDC66-219ENST00000484441 GOLGA6L1Q8N7Z2 621 aa9.91□□□□□ -0.82
CCDC66-219ENST00000484441 BRD7Q9NPI1 651 aa9.91□□□□□ -0.82
CCDC66-219ENST00000484441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCDC66-219ENST00000484441 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
CCDC66-219ENST00000484441 SFSWAPQ12872 951 aaKnown RBP9.9□□□□□ -0.82
CCDC66-219ENST00000484441 ZNF468Q5VIY5 522 aaPredicted RBP9.9□□□□□ -0.82
CCDC66-219ENST00000484441 C1orf229Q6ZS94 237 aaPredicted RBP9.9□□□□□ -0.82
CCDC66-219ENST00000484441 VTI1AQ96AJ9 217 aa9.9□□□□□ -0.82
CCDC66-219ENST00000484441 LRFN2Q9ULH4 789 aa9.9□□□□□ -0.82
CCDC66-219ENST00000484441 ADAMTS8Q9UP79 889 aa9.9□□□□□ -0.82
CCDC66-219ENST00000484441 DGKZQ13574 1117 aa9.89□□□□□ -0.83
CCDC66-219ENST00000484441 CEP63Q96MT8 703 aa9.89□□□□□ -0.83
CCDC66-219ENST00000484441 KLK14Q9P0G3 267 aa9.89□□□□□ -0.83
CCDC66-219ENST00000484441 KLF15Q9UIH9 416 aa9.89□□□□□ -0.83
CCDC66-219ENST00000484441 C11orf91Q3C1V1 193 aa9.88□□□□□ -0.83
CCDC66-219ENST00000484441 COX20Q5RI15 118 aa9.88□□□□□ -0.83
CCDC66-219ENST00000484441 GGA1Q9UJY5 639 aa9.88□□□□□ -0.83
CCDC66-219ENST00000484441 PTCD1O75127 700 aaKnown RBP9.87□□□□□ -0.83
CCDC66-219ENST00000484441 ATP2B4P23634 1241 aa9.87□□□□□ -0.83
CCDC66-219ENST00000484441 ADH6P28332 368 aa9.87□□□□□ -0.83
CCDC66-219ENST00000484441 GRIN2CQ14957 1233 aa9.87□□□□□ -0.83
CCDC66-219ENST00000484441 MDFIQ99750 246 aa9.87□□□□□ -0.83
CCDC66-219ENST00000484441 ENAMQ9NRM1 1142 aa9.87□□□□□ -0.83
CCDC66-219ENST00000484441 EPXP11678 715 aa9.86□□□□□ -0.83
CCDC66-219ENST00000484441 CAPN12Q6ZSI9 719 aa9.86□□□□□ -0.83
CCDC66-219ENST00000484441 KCNH4Q9UQ05 1017 aa9.86□□□□□ -0.83
CCDC66-219ENST00000484441 SHISA8B8ZZ34 492 aa9.85□□□□□ -0.83
CCDC66-219ENST00000484441 GRNP28799 593 aaKnown RBP9.85□□□□□ -0.83
CCDC66-219ENST00000484441 INPP5BP32019 993 aa9.85□□□□□ -0.83
CCDC66-219ENST00000484441 C16orf46Q6P387 395 aa9.85□□□□□ -0.83
CCDC66-219ENST00000484441 FCHSD1Q86WN1 690 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms