RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 MEGF6O75095 1541 aa9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 USP42Q9H9J4 1324 aaKnown RBP9.04□□□□□ -0.96
SHROOM3-206ENST00000484236 SRGAP3O43295 1099 aa9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 SURF6O75683 361 aaKnown RBP9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 HSP90AA1P07900 732 aaKnown RBP9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 NBPF7P0C2Y1 421 aaPredicted RBP9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 MCM2P49736 904 aa9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 RAB3GAP1Q15042 981 aa9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 LARP1Q6PKG0 1096 aaKnown RBP9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 RHPN1Q8TCX5 695 aa9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 GBP4Q96PP9 640 aa9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 C9orf78Q9NZ63 289 aaPredicted RBP9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 MAP3K2Q9Y2U5 619 aa9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 TTC41PQ6P2S7 1318 aa9.03□□□□□ -0.96
SHROOM3-206ENST00000484236 STRCQ7RTU9 1775 aa9.02□□□□□ -0.97
SHROOM3-206ENST00000484236 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.97
SHROOM3-206ENST00000484236 CWC22Q9HCG8 908 aaKnown RBP9.02□□□□□ -0.97
SHROOM3-206ENST00000484236 SOS2Q07890 1332 aaPredicted RBP9.02□□□□□ -0.97
SHROOM3-206ENST00000484236 ERBB4Q15303 1308 aa9.02□□□□□ -0.97
SHROOM3-206ENST00000484236 COL15A1P39059 1388 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 TRIM6-TRIM34B2RNG4 842 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 GRM8O00222 908 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 SNRPA1P09661 255 aaKnown RBP9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 CHMLP26374 656 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 NUCB2P80303 420 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 NEXNQ0ZGT2 675 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 TTC5Q8N0Z6 440 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 SPRYD3Q8NCJ5 442 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 GPATCH3Q96I76 525 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 FMNL2Q96PY5 1086 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 ABCA3Q99758 1704 aa9.01□□□□□ -0.97
SHROOM3-206ENST00000484236 UBR2Q8IWV8 1755 aa9□□□□□ -0.97
SHROOM3-206ENST00000484236 ZBTB22O15209 634 aa9□□□□□ -0.97
SHROOM3-206ENST00000484236 GLRX3O76003 335 aaKnown RBP9□□□□□ -0.97
SHROOM3-206ENST00000484236 CD2BP2O95400 341 aaKnown RBP9□□□□□ -0.97
SHROOM3-206ENST00000484236 ANXA1P04083 346 aa9□□□□□ -0.97
SHROOM3-206ENST00000484236 POTEJP0CG39 1038 aa9□□□□□ -0.97
SHROOM3-206ENST00000484236 PDIA6Q15084 440 aa9□□□□□ -0.97
SHROOM3-206ENST00000484236 SKOR2Q2VWA4 1001 aaPredicted RBP9□□□□□ -0.97
SHROOM3-206ENST00000484236 L1TD1Q5T7N2 865 aaKnown RBP9□□□□□ -0.97
SHROOM3-206ENST00000484236 BRINP3Q76B58 766 aa9□□□□□ -0.97
SHROOM3-206ENST00000484236 CNTROBQ8N137 903 aa9□□□□□ -0.97
SHROOM3-206ENST00000484236 CLASRPQ8N2M8 674 aaKnown RBP9□□□□□ -0.97
SHROOM3-206ENST00000484236 PI4K2BQ8TCG2 481 aa9□□□□□ -0.97
SHROOM3-206ENST00000484236 ISY1Q9ULR0 285 aaKnown RBP9□□□□□ -0.97
SHROOM3-206ENST00000484236 WDR17Q8IZU2 1322 aa9□□□□□ -0.97
SHROOM3-206ENST00000484236 PAPPAQ13219 1627 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 NHSL1Q5SYE7 1610 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 AFDNP55196 1824 aaKnown RBP8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 ERVV-2B6SEH9 535 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 CYP27B1O15528 508 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 OS9Q13438 667 aaPredicted RBP8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 PROSER3Q2NL68 480 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 RIC3Q7Z5B4 369 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 NFATC2IPQ8NCF5 419 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 TNPO1Q92973 898 aaKnown RBP8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 RILPL2Q969X0 211 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 METTL22Q9BUU2 404 aaPredicted RBP8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 PCDH11XQ9BZA7 1347 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 PCDH11YQ9BZA8 1340 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 ARFGEF2Q9Y6D5 1785 aa8.99□□□□□ -0.97
SHROOM3-206ENST00000484236 GOLGA6L22H0YM25 854 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 TRAK2O60296 914 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 PLEKHG5O94827 1062 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 CABP4P57796 275 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 NKX1-1Q15270 411 aaPredicted RBP8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 CABLES1Q8TDN4 633 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 RUFY2Q8WXA3 655 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 DDX17Q92841 729 aaKnown RBP8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 ZNF496Q96IT1 587 aaPredicted RBP8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 IL1RAPL2Q9NP60 686 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 ECHDC1Q9NTX5 307 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 GLI3P10071 1580 aa8.98□□□□□ -0.97
SHROOM3-206ENST00000484236 COL5A2P05997 1499 aaPredicted RBP8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 PRAMEF22A3QJZ6 481 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 NEURL1BA8MQ27 555 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 HIP1O00291 1037 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 SGSM2O43147 1006 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 HSPA2P54652 639 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 G3BP1Q13283 466 aaKnown RBP eCLIP8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 SLC39A6Q13433 755 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 GCKRQ14397 625 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 CHRNA2Q15822 529 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 ANKRD13DQ6ZTN6 518 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 LRP10Q7Z4F1 713 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 NUTM1Q86Y26 1132 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 ZCRB1Q8TBF4 217 aaKnown RBP8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 CARD10Q9BWT7 1032 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 ANO2Q9NQ90 1003 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 PRDM11Q9NQV5 511 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 SLAIN2Q9P270 581 aa8.97□□□□□ -0.97
SHROOM3-206ENST00000484236 IGKV5-2P06315 115 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 IFIT2P09913 472 aaKnown RBP8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 HSPA4P34932 840 aa8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 CWF19L2Q2TBE0 894 aaKnown RBP8.96□□□□□ -0.98
SHROOM3-206ENST00000484236 TSHZ3Q63HK5 1081 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms