RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 PLEKHM2Q8IWE5 1019 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 LINS1Q8NG48 757 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 SSH3Q8TE77 659 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 LRRCC1Q9C099 1032 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 PHAXQ9H814 394 aaKnown RBP11.91□□□□□ -0.5
UFD1-208ENST00000484101 CASZ1Q86V15 1759 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 TNS2Q63HR2 1409 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 COL15A1P39059 1388 aa11.91□□□□□ -0.5
UFD1-208ENST00000484101 AFDNP55196 1824 aaKnown RBP11.9□□□□□ -0.5
UFD1-208ENST00000484101 PI4KAP2A4QPH2 592 aa11.9□□□□□ -0.5
UFD1-208ENST00000484101 EVA1CP58658 441 aa11.9□□□□□ -0.5
UFD1-208ENST00000484101 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.5
UFD1-208ENST00000484101 LARP1Q6PKG0 1096 aaKnown RBP11.9□□□□□ -0.5
UFD1-208ENST00000484101 PI4KAP1Q8N8J0 262 aa11.9□□□□□ -0.5
UFD1-208ENST00000484101 C22orf23Q9BZE7 217 aa11.9□□□□□ -0.5
UFD1-208ENST00000484101 UTYO14607 1347 aa11.89□□□□□ -0.51
UFD1-208ENST00000484101 TOGARAM1Q9Y4F4 1720 aa11.89□□□□□ -0.51
UFD1-208ENST00000484101 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
UFD1-208ENST00000484101 POLA2Q14181 598 aa11.89□□□□□ -0.51
UFD1-208ENST00000484101 FAM196AQ6ZSG2 479 aa11.89□□□□□ -0.51
UFD1-208ENST00000484101 NFATC2IPQ8NCF5 419 aa11.89□□□□□ -0.51
UFD1-208ENST00000484101 IL27Q8NEV9 243 aa11.89□□□□□ -0.51
UFD1-208ENST00000484101 SYT17Q9BSW7 474 aa11.89□□□□□ -0.51
UFD1-208ENST00000484101 CDCA7Q9BWT1 371 aaPredicted RBP11.89□□□□□ -0.51
UFD1-208ENST00000484101 LRRFIP2Q9Y608 721 aaKnown RBP11.89□□□□□ -0.51
UFD1-208ENST00000484101 KCPQ6ZWJ8 1503 aa11.89□□□□□ -0.51
UFD1-208ENST00000484101 ADRA2BP18089 450 aa11.88□□□□□ -0.51
UFD1-208ENST00000484101 PTGER2P43116 358 aa11.88□□□□□ -0.51
UFD1-208ENST00000484101 ERC1Q8IUD2 1116 aa11.88□□□□□ -0.51
UFD1-208ENST00000484101 USP35Q9P2H5 1018 aa11.88□□□□□ -0.51
UFD1-208ENST00000484101 MAP3K2Q9Y2U5 619 aa11.88□□□□□ -0.51
UFD1-208ENST00000484101 AK9Q5TCS8 1911 aa11.88□□□□□ -0.51
UFD1-208ENST00000484101 MFAP1P55081 439 aaKnown RBP11.87□□□□□ -0.51
UFD1-208ENST00000484101 KIF1BPQ96EK5 621 aa11.87□□□□□ -0.51
UFD1-208ENST00000484101 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
UFD1-208ENST00000484101 FHDC1Q9C0D6 1143 aaPredicted RBP11.87□□□□□ -0.51
UFD1-208ENST00000484101 C9orf78Q9NZ63 289 aaPredicted RBP11.87□□□□□ -0.51
UFD1-208ENST00000484101 ITGB4P16144 1822 aa11.86□□□□□ -0.51
UFD1-208ENST00000484101 SEC24BO95487 1268 aa11.86□□□□□ -0.51
UFD1-208ENST00000484101 TBC1D9Q6ZT07 1266 aa11.86□□□□□ -0.51
UFD1-208ENST00000484101 TEX13AQ9BXU3 409 aaPredicted RBP11.86□□□□□ -0.51
UFD1-208ENST00000484101 PDGFDQ9GZP0 370 aaPredicted RBP11.86□□□□□ -0.51
UFD1-208ENST00000484101 STAP2Q9UGK3 403 aa11.86□□□□□ -0.51
UFD1-208ENST00000484101 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
UFD1-208ENST00000484101 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
UFD1-208ENST00000484101 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
UFD1-208ENST00000484101 GRM8O00222 908 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 EPB41L2O43491 1005 aaKnown RBP11.85□□□□□ -0.51
UFD1-208ENST00000484101 CAPN15O75808 1086 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 REC8O95072 547 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 MX1P20591 662 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 PDE1AP54750 535 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 PDIA6Q15084 440 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 METTL22Q9BUU2 404 aaPredicted RBP11.85□□□□□ -0.51
UFD1-208ENST00000484101 BTG4Q9NY30 223 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 THRAP3Q9Y2W1 955 aaKnown RBP11.85□□□□□ -0.51
UFD1-208ENST00000484101 SALL3Q9BXA9 1300 aa11.85□□□□□ -0.51
UFD1-208ENST00000484101 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
UFD1-208ENST00000484101 SRGAP3O43295 1099 aa11.84□□□□□ -0.51
UFD1-208ENST00000484101 ZBTB7AO95365 584 aa11.84□□□□□ -0.51
UFD1-208ENST00000484101 GSPT1P15170 499 aaKnown RBP11.84□□□□□ -0.51
UFD1-208ENST00000484101 HSPA6P17066 643 aa11.84□□□□□ -0.51
UFD1-208ENST00000484101 SLC39A6Q13433 755 aa11.84□□□□□ -0.51
UFD1-208ENST00000484101 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
UFD1-208ENST00000484101 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
UFD1-208ENST00000484101 STRN4Q9NRL3 753 aa11.84□□□□□ -0.51
UFD1-208ENST00000484101 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
UFD1-208ENST00000484101 ANKRD13DQ6ZTN6 518 aa11.83□□□□□ -0.52
UFD1-208ENST00000484101 HSCBQ8IWL3 235 aa11.83□□□□□ -0.52
UFD1-208ENST00000484101 PLBD2Q8NHP8 589 aa11.83□□□□□ -0.52
UFD1-208ENST00000484101 SNX21Q969T3 373 aa11.83□□□□□ -0.52
UFD1-208ENST00000484101 GPATCH3Q96I76 525 aa11.83□□□□□ -0.52
UFD1-208ENST00000484101 TMOD3Q9NYL9 352 aa11.83□□□□□ -0.52
UFD1-208ENST00000484101 EXOC6BQ9Y2D4 811 aa11.83□□□□□ -0.52
UFD1-208ENST00000484101 TTC41PQ6P2S7 1318 aa11.83□□□□□ -0.52
UFD1-208ENST00000484101 USP42Q9H9J4 1324 aaKnown RBP11.83□□□□□ -0.52
UFD1-208ENST00000484101 NEURL1BA8MQ27 555 aa11.82□□□□□ -0.52
UFD1-208ENST00000484101 NBPF7P0C2Y1 421 aaPredicted RBP11.82□□□□□ -0.52
UFD1-208ENST00000484101 LRP10Q7Z4F1 713 aa11.82□□□□□ -0.52
UFD1-208ENST00000484101 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
UFD1-208ENST00000484101 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
UFD1-208ENST00000484101 DOT1LQ8TEK3 1739 aa11.81□□□□□ -0.52
UFD1-208ENST00000484101 SURF6O75683 361 aaKnown RBP11.81□□□□□ -0.52
UFD1-208ENST00000484101 ANXA1P04083 346 aa11.81□□□□□ -0.52
UFD1-208ENST00000484101 SDSP20132 328 aa11.81□□□□□ -0.52
UFD1-208ENST00000484101 GCKRQ14397 625 aa11.81□□□□□ -0.52
UFD1-208ENST00000484101 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
UFD1-208ENST00000484101 RHPN1Q8TCX5 695 aa11.81□□□□□ -0.52
UFD1-208ENST00000484101 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
UFD1-208ENST00000484101 TJP1Q07157 1748 aa11.8□□□□□ -0.52
UFD1-208ENST00000484101 ANKRD36CQ5JPF3 1778 aa11.8□□□□□ -0.52
UFD1-208ENST00000484101 PRAMEF22A3QJZ6 481 aa11.8□□□□□ -0.52
UFD1-208ENST00000484101 ERC2O15083 957 aa11.8□□□□□ -0.52
UFD1-208ENST00000484101 SMARCA5O60264 1052 aaPredicted RBP11.8□□□□□ -0.52
UFD1-208ENST00000484101 PRELPP51888 382 aa11.8□□□□□ -0.52
UFD1-208ENST00000484101 CLASRPQ8N2M8 674 aaKnown RBP11.8□□□□□ -0.52
UFD1-208ENST00000484101 ZNF831Q5JPB2 1677 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms