RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 FTSJ3Q8IY81 847 aaKnown RBP11.48□□□□□ -0.57
SHROOM4-204ENST00000483955 AK7Q96M32 723 aa11.48□□□□□ -0.57
SHROOM4-204ENST00000483955 NBPF26B4DH59 902 aa11.47□□□□□ -0.57
SHROOM4-204ENST00000483955 ANXA1P04083 346 aa11.47□□□□□ -0.57
SHROOM4-204ENST00000483955 TRIM27P14373 513 aa11.47□□□□□ -0.57
SHROOM4-204ENST00000483955 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
SHROOM4-204ENST00000483955 NBPF14Q5TI25 921 aa11.47□□□□□ -0.57
SHROOM4-204ENST00000483955 NBPF10Q6P3W6 841 aaKnown RBP11.47□□□□□ -0.57
SHROOM4-204ENST00000483955 LRP10Q7Z4F1 713 aa11.47□□□□□ -0.57
SHROOM4-204ENST00000483955 NBPF15Q8N660 670 aa11.47□□□□□ -0.57
SHROOM4-204ENST00000483955 LRRC4BQ9NT99 713 aa11.47□□□□□ -0.57
SHROOM4-204ENST00000483955 COL15A1P39059 1388 aa11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 A0A087WZG4 1122 aa11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 INTS5Q6P9B9 1019 aaKnown RBP11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 KIF6Q6ZMV9 814 aa11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 G2E3Q7L622 706 aa11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 XAGE3Q8WTP9 111 aa11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 CAMKK2Q96RR4 588 aa11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 PHAXQ9H814 394 aaKnown RBP11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 RTCBQ9Y3I0 505 aaKnown RBP11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 ZNF330Q9Y3S2 320 aaPredicted RBP11.46□□□□□ -0.57
SHROOM4-204ENST00000483955 EP400Q96L91 3159 aa11.46□□□□□ -0.58
SHROOM4-204ENST00000483955 ABCC4O15439 1325 aa11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 GNPATO15228 680 aa11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 RPS6KA4O75676 772 aa11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 PIP4K2AP48426 406 aaPredicted RBP11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 EIF5P55010 431 aaKnown RBP11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 KCNQ4P56696 695 aa11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 EN1Q05925 392 aaPredicted RBP11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 COPS6Q7L5N1 327 aa11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 DZIP1LQ8IYY4 767 aaKnown RBP11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 PROM2Q8N271 834 aa11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 MYH14Q7Z406 1995 aaKnown RBP11.45□□□□□ -0.58
SHROOM4-204ENST00000483955 N4BP2Q86UW6 1770 aaPredicted RBP11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 NUP188Q5SRE5 1749 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 RGL2O15211 777 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 PLIN1O60240 522 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 SSFA2P28290 1259 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 AIMP1Q12904 312 aaKnown RBP11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 EZH2Q15910 746 aaKnown RBP11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 KSR2Q6VAB6 950 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 RIC3Q7Z5B4 369 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 PLBD2Q8NHP8 589 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 DNAAF4Q8WXU2 420 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 ARFGEF2Q9Y6D5 1785 aa11.44□□□□□ -0.58
SHROOM4-204ENST00000483955 ATP10DQ9P241 1426 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 ADCY9O60503 1353 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 SCN7AQ01118 1682 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 MAP3K15Q6ZN16 1313 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 UBR3Q6ZT12 1888 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 PI4KAP2A4QPH2 592 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 ERVV-1B6SEH8 477 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 CCT4P50991 539 aaKnown RBP11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 NEXNQ0ZGT2 675 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 DZIP3Q86Y13 1208 aaKnown RBP11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 PI4KAP1Q8N8J0 262 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 ZNF652Q9Y2D9 606 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 BCORQ6W2J9 1755 aa11.43□□□□□ -0.58
SHROOM4-204ENST00000483955 HSP90AB3PQ58FF7 597 aa11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 LHX8Q68G74 356 aa11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 SLC4A10Q6U841 1118 aa11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 TTLL7Q6ZT98 887 aa11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 DEFB132Q7Z7B7 95 aa11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 FLAD1Q8NFF5 587 aa11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 UPF1Q92900 1129 aaKnown RBP eCLIP11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 CLUAP1Q96AJ1 413 aa11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 CHMP4BQ9H444 224 aaKnown RBP11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 MAP3K2Q9Y2U5 619 aa11.42□□□□□ -0.58
SHROOM4-204ENST00000483955 IBTKQ9P2D0 1353 aaPredicted RBP11.41□□□□□ -0.58
SHROOM4-204ENST00000483955 C4AP0C0L4 1744 aa11.41□□□□□ -0.58
SHROOM4-204ENST00000483955 QSER1Q2KHR3 1735 aa11.41□□□□□ -0.58
SHROOM4-204ENST00000483955 MVPQ14764 893 aaKnown RBP11.41□□□□□ -0.58
SHROOM4-204ENST00000483955 TRAPPC3LQ5T215 181 aa11.41□□□□□ -0.58
SHROOM4-204ENST00000483955 INTS3Q68E01 1043 aaKnown RBP11.41□□□□□ -0.58
SHROOM4-204ENST00000483955 ITPRIPQ8IWB1 547 aa11.41□□□□□ -0.58
SHROOM4-204ENST00000483955 METTL22Q9BUU2 404 aaPredicted RBP11.41□□□□□ -0.58
SHROOM4-204ENST00000483955 STK32BQ9NY57 414 aa11.41□□□□□ -0.58
SHROOM4-204ENST00000483955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 F6X3S4 739 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 ZPR1O75312 459 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 RFC4P35249 363 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 AAMPQ13685 434 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 GIGYF2Q6Y7W6 1299 aaKnown RBP11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 TMEM57Q8N5G2 664 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 LINS1Q8NG48 757 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 PANK1Q8TE04 598 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 SRCIN1Q9C0H9 1055 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 ZBTB3Q9H5J0 574 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 TFCP2L1Q9NZI6 479 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 NARFQ9UHQ1 456 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 DDX19BQ9UMR2 479 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 ANKRD36CQ5JPF3 1778 aa11.4□□□□□ -0.58
SHROOM4-204ENST00000483955 USP42Q9H9J4 1324 aaKnown RBP11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 ALDH1L1O75891 902 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 PHF14O94880 888 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 CAMTA2O94983 1202 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 RLBP1P12271 317 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 SLC15A2Q16348 729 aa11.39□□□□□ -0.59
SHROOM4-204ENST00000483955 ZNF827Q17R98 1081 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms