RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 ANKRD31Q8N7Z5 1873 aa18.46■□□□□ 0.54
SHANK1-207ENST00000483128 LAMB4A4D0S4 1761 aa18.45■□□□□ 0.54
SHANK1-207ENST00000483128 FAM177BA6PVY3 158 aa18.45■□□□□ 0.54
SHANK1-207ENST00000483128 ST5P78524 1137 aa18.45■□□□□ 0.54
SHANK1-207ENST00000483128 RASSF7Q02833 373 aa18.45■□□□□ 0.54
SHANK1-207ENST00000483128 LMOD3Q0VAK6 560 aa18.45■□□□□ 0.54
SHANK1-207ENST00000483128 RUNDC1Q96C34 613 aa18.45■□□□□ 0.54
SHANK1-207ENST00000483128 RNF181Q9P0P0 153 aa18.45■□□□□ 0.54
SHANK1-207ENST00000483128 ZNF219Q9P2Y4 722 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-207ENST00000483128 NIP7Q9Y221 180 aaKnown RBP eCLIP18.45■□□□□ 0.54
SHANK1-207ENST00000483128 DLEC1Q9Y238 1755 aa18.44■□□□□ 0.54
SHANK1-207ENST00000483128 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
SHANK1-207ENST00000483128 KIF3CO14782 793 aa18.42■□□□□ 0.54
SHANK1-207ENST00000483128 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-207ENST00000483128 TTLL7Q6ZT98 887 aa18.42■□□□□ 0.54
SHANK1-207ENST00000483128 PDZRN3Q9UPQ7 1066 aa18.42■□□□□ 0.54
SHANK1-207ENST00000483128 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
SHANK1-207ENST00000483128 C21orf2O43822 256 aa18.41■□□□□ 0.54
SHANK1-207ENST00000483128 TPTE2Q6XPS3 522 aa18.41■□□□□ 0.54
SHANK1-207ENST00000483128 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
SHANK1-207ENST00000483128 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
SHANK1-207ENST00000483128 COL11A2P13942 1736 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-207ENST00000483128 SBF1O95248 1867 aa18.4■□□□□ 0.54
SHANK1-207ENST00000483128 ZBTB3Q9H5J0 574 aa18.4■□□□□ 0.54
SHANK1-207ENST00000483128 NMRK2Q9NPI5 230 aa18.4■□□□□ 0.54
SHANK1-207ENST00000483128 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
SHANK1-207ENST00000483128 MAP3K15Q6ZN16 1313 aa18.4■□□□□ 0.54
SHANK1-207ENST00000483128 RGL2O15211 777 aa18.39■□□□□ 0.53
SHANK1-207ENST00000483128 SRGNP10124 158 aa18.39■□□□□ 0.53
SHANK1-207ENST00000483128 GTF2E1P29083 439 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-207ENST00000483128 PRELPP51888 382 aa18.39■□□□□ 0.53
SHANK1-207ENST00000483128 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
SHANK1-207ENST00000483128 ERVV-1B6SEH8 477 aa18.38■□□□□ 0.53
SHANK1-207ENST00000483128 ANXA1P04083 346 aa18.38■□□□□ 0.53
SHANK1-207ENST00000483128 LMNB1P20700 586 aa18.38■□□□□ 0.53
SHANK1-207ENST00000483128 GPTP24298 496 aa18.38■□□□□ 0.53
SHANK1-207ENST00000483128 KRT24Q2M2I5 525 aa18.38■□□□□ 0.53
SHANK1-207ENST00000483128 STYK1Q6J9G0 422 aa18.38■□□□□ 0.53
SHANK1-207ENST00000483128 CNKSR1Q969H4 720 aa18.38■□□□□ 0.53
SHANK1-207ENST00000483128 MASTLQ96GX5 879 aa18.38■□□□□ 0.53
SHANK1-207ENST00000483128 NFKBIEO00221 500 aa18.37■□□□□ 0.53
SHANK1-207ENST00000483128 CHL1O00533 1208 aa18.37■□□□□ 0.53
SHANK1-207ENST00000483128 PROSER3Q2NL68 480 aa18.37■□□□□ 0.53
SHANK1-207ENST00000483128 PRPF40BQ6NWY9 871 aaKnown RBP18.37■□□□□ 0.53
SHANK1-207ENST00000483128 NUP98P52948 1817 aa18.36■□□□□ 0.53
SHANK1-207ENST00000483128 CACNA1SQ13698 1873 aa18.36■□□□□ 0.53
SHANK1-207ENST00000483128 PDIA6Q15084 440 aa18.36■□□□□ 0.53
SHANK1-207ENST00000483128 ERBB4Q15303 1308 aa18.36■□□□□ 0.53
SHANK1-207ENST00000483128 NUTM1Q86Y26 1132 aa18.36■□□□□ 0.53
SHANK1-207ENST00000483128 SLX4Q8IY92 1834 aa18.36■□□□□ 0.53
SHANK1-207ENST00000483128 KDM2BQ8NHM5 1336 aa18.35■□□□□ 0.53
SHANK1-207ENST00000483128 APAF1O14727 1248 aa18.35■□□□□ 0.53
SHANK1-207ENST00000483128 CCDC88AQ3V6T2 1871 aa18.35■□□□□ 0.53
SHANK1-207ENST00000483128 NPR1P16066 1061 aa18.34■□□□□ 0.53
SHANK1-207ENST00000483128 LRP10Q7Z4F1 713 aa18.34■□□□□ 0.53
SHANK1-207ENST00000483128 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
SHANK1-207ENST00000483128 RRAGCQ9HB90 399 aa18.34■□□□□ 0.53
SHANK1-207ENST00000483128 UBN2Q6ZU65 1347 aa18.33■□□□□ 0.53
SHANK1-207ENST00000483128 TOMM70O94826 608 aa18.33■□□□□ 0.52
SHANK1-207ENST00000483128 AIMP1Q12904 312 aaKnown RBP18.33■□□□□ 0.52
SHANK1-207ENST00000483128 ERFEQ4G0M1 354 aa18.33■□□□□ 0.52
SHANK1-207ENST00000483128 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
SHANK1-207ENST00000483128 SUSD4Q5VX71 490 aa18.33■□□□□ 0.52
SHANK1-207ENST00000483128 GIGYF2Q6Y7W6 1299 aaKnown RBP18.33■□□□□ 0.52
SHANK1-207ENST00000483128 ABCC12Q96J65 1359 aa18.32■□□□□ 0.52
SHANK1-207ENST00000483128 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-207ENST00000483128 COPS6Q7L5N1 327 aa18.32■□□□□ 0.52
SHANK1-207ENST00000483128 ZNF34Q8IZ26 560 aa18.32■□□□□ 0.52
SHANK1-207ENST00000483128 TAOK3Q9H2K8 898 aa18.32■□□□□ 0.52
SHANK1-207ENST00000483128 HSPA6P17066 643 aa18.31■□□□□ 0.52
SHANK1-207ENST00000483128 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-207ENST00000483128 XAGE3Q8WTP9 111 aa18.31■□□□□ 0.52
SHANK1-207ENST00000483128 CFAP44Q96MT7 982 aa18.31■□□□□ 0.52
SHANK1-207ENST00000483128 FER1L6Q2WGJ9 1857 aa18.31■□□□□ 0.52
SHANK1-207ENST00000483128 ZNF316A6NFI3 1004 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-207ENST00000483128 SOGA3Q5TF21 947 aa18.3■□□□□ 0.52
SHANK1-207ENST00000483128 OLFM4Q6UX06 510 aa18.3■□□□□ 0.52
SHANK1-207ENST00000483128 ZC3H4Q9UPT8 1303 aaKnown RBP18.29■□□□□ 0.52
SHANK1-207ENST00000483128 GLTPD2A6NH11 291 aa18.29■□□□□ 0.52
SHANK1-207ENST00000483128 HDGFL1Q5TGJ6 251 aa18.29■□□□□ 0.52
SHANK1-207ENST00000483128 C7orf43Q8WVR3 580 aa18.29■□□□□ 0.52
SHANK1-207ENST00000483128 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
SHANK1-207ENST00000483128 MBIPQ9NS73 344 aa18.29■□□□□ 0.52
SHANK1-207ENST00000483128 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
SHANK1-207ENST00000483128 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
SHANK1-207ENST00000483128 ARFGEF2Q9Y6D5 1785 aa18.28■□□□□ 0.52
SHANK1-207ENST00000483128 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
SHANK1-207ENST00000483128 CCDC93Q567U6 631 aa18.28■□□□□ 0.52
SHANK1-207ENST00000483128 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
SHANK1-207ENST00000483128 PPP1R42Q7Z4L9 355 aa18.28■□□□□ 0.52
SHANK1-207ENST00000483128 LTBP3Q9NS15 1303 aa18.27■□□□□ 0.52
SHANK1-207ENST00000483128 TIAM2Q8IVF5 1701 aa18.27■□□□□ 0.52
SHANK1-207ENST00000483128 NTSR2O95665 410 aa18.27■□□□□ 0.52
SHANK1-207ENST00000483128 CRY2Q49AN0 593 aa18.27■□□□□ 0.52
SHANK1-207ENST00000483128 PARP10Q53GL7 1025 aa18.27■□□□□ 0.52
SHANK1-207ENST00000483128 RPGRQ92834 1020 aaKnown RBP18.27■□□□□ 0.52
SHANK1-207ENST00000483128 ZNF428Q96B54 188 aa18.27■□□□□ 0.52
SHANK1-207ENST00000483128 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
SHANK1-207ENST00000483128 UTP14AQ9BVJ6 771 aaKnown RBP18.26■□□□□ 0.51
SHANK1-207ENST00000483128 IBTKQ9P2D0 1353 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms